RNA–Protein interactions for RNA: ENST00000388789.4

TTC41P-201, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 1 (best)

Gene TTC41P, Length 1,372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-201ENST00000388789 ADGRL1O94910 1474 aa11.59□□□□□ -0.55
TTC41P-201ENST00000388789 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
TTC41P-201ENST00000388789 INO80Q9ULG1 1556 aaPredicted RBP11.59□□□□□ -0.55
TTC41P-201ENST00000388789 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.56
TTC41P-201ENST00000388789 PLA2R1Q13018 1463 aa11.58□□□□□ -0.56
TTC41P-201ENST00000388789 CNTLNQ9NXG0 1405 aa11.58□□□□□ -0.56
TTC41P-201ENST00000388789 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
TTC41P-201ENST00000388789 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
TTC41P-201ENST00000388789 DAXXQ9UER7 740 aaPredicted RBP11.58□□□□□ -0.56
TTC41P-201ENST00000388789 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
TTC41P-201ENST00000388789 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
TTC41P-201ENST00000388789 USP47Q96K76 1375 aa11.56□□□□□ -0.56
TTC41P-201ENST00000388789 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
TTC41P-201ENST00000388789 ZNF326Q5BKZ1 582 aaKnown RBP11.56□□□□□ -0.56
TTC41P-201ENST00000388789 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
TTC41P-201ENST00000388789 KDM5CP41229 1560 aa11.56□□□□□ -0.56
TTC41P-201ENST00000388789 KANK1Q14678 1352 aa11.56□□□□□ -0.56
TTC41P-201ENST00000388789 DHX29Q7Z478 1369 aaKnown RBP11.56□□□□□ -0.56
TTC41P-201ENST00000388789 KDM2AQ9Y2K7 1162 aa11.55□□□□□ -0.56
TTC41P-201ENST00000388789 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
TTC41P-201ENST00000388789 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
TTC41P-201ENST00000388789 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
TTC41P-201ENST00000388789 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
TTC41P-201ENST00000388789 PRAG1Q86YV5 1406 aa11.53□□□□□ -0.56
TTC41P-201ENST00000388789 VWDEQ8N2E2 1590 aa11.53□□□□□ -0.56
TTC41P-201ENST00000388789 TET3O43151 1660 aa11.53□□□□□ -0.56
TTC41P-201ENST00000388789 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
TTC41P-201ENST00000388789 E9PCH4 1651 aa11.52□□□□□ -0.57
TTC41P-201ENST00000388789 STAC3Q96MF2 364 aa11.52□□□□□ -0.57
TTC41P-201ENST00000388789 PTPRTO14522 1441 aa11.52□□□□□ -0.57
TTC41P-201ENST00000388789 A2MP01023 1474 aa11.51□□□□□ -0.57
TTC41P-201ENST00000388789 NEO1Q92859 1461 aa11.51□□□□□ -0.57
TTC41P-201ENST00000388789 LAMC1P11047 1609 aa11.51□□□□□ -0.57
TTC41P-201ENST00000388789 TRPM1Q7Z4N2 1603 aa11.51□□□□□ -0.57
TTC41P-201ENST00000388789 KIDINS220Q9ULH0 1771 aa11.51□□□□□ -0.57
TTC41P-201ENST00000388789 TRPM2O94759 1503 aa11.5□□□□□ -0.57
TTC41P-201ENST00000388789 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
TTC41P-201ENST00000388789 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
TTC41P-201ENST00000388789 BCORL1Q5H9F3 1711 aa11.5□□□□□ -0.57
TTC41P-201ENST00000388789 KIF3BO15066 747 aa11.5□□□□□ -0.57
TTC41P-201ENST00000388789 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
TTC41P-201ENST00000388789 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
TTC41P-201ENST00000388789 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
TTC41P-201ENST00000388789 POGZQ7Z3K3 1410 aa11.49□□□□□ -0.57
TTC41P-201ENST00000388789 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
TTC41P-201ENST00000388789 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
TTC41P-201ENST00000388789 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
TTC41P-201ENST00000388789 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
TTC41P-201ENST00000388789 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
TTC41P-201ENST00000388789 MROH1Q8NDA8 1641 aa11.47□□□□□ -0.57
TTC41P-201ENST00000388789 CEP152O94986 1710 aa11.47□□□□□ -0.57
TTC41P-201ENST00000388789 ST20-MTHFSA0A0A6YYL1 179 aa11.47□□□□□ -0.57
TTC41P-201ENST00000388789 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
TTC41P-201ENST00000388789 HECW2Q9P2P5 1572 aa11.46□□□□□ -0.57
TTC41P-201ENST00000388789 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
TTC41P-201ENST00000388789 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.58
TTC41P-201ENST00000388789 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
TTC41P-201ENST00000388789 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
TTC41P-201ENST00000388789 CLTCL1P53675 1640 aa11.44□□□□□ -0.58
TTC41P-201ENST00000388789 EFCAB6Q5THR3 1501 aa11.44□□□□□ -0.58
TTC41P-201ENST00000388789 FRMPD1Q5SYB0 1578 aa11.43□□□□□ -0.58
TTC41P-201ENST00000388789 NBPF1Q3BBV0 1214 aa11.42□□□□□ -0.58
TTC41P-201ENST00000388789 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
TTC41P-201ENST00000388789 POLR3GLQ9BT43 218 aa11.41□□□□□ -0.58
TTC41P-201ENST00000388789 MADDQ8WXG6 1647 aa11.41□□□□□ -0.58
TTC41P-201ENST00000388789 KTN1Q86UP2 1357 aaKnown RBP11.4□□□□□ -0.58
TTC41P-201ENST00000388789 ABCA6Q8N139 1617 aa11.4□□□□□ -0.58
TTC41P-201ENST00000388789 RICTORQ6R327 1708 aa11.4□□□□□ -0.58
TTC41P-201ENST00000388789 KIF1BO60333 1816 aa11.4□□□□□ -0.59
TTC41P-201ENST00000388789 KIAA1210Q9ULL0 1709 aa11.39□□□□□ -0.59
TTC41P-201ENST00000388789 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
TTC41P-201ENST00000388789 TESK2Q96S53 571 aa11.38□□□□□ -0.59
TTC41P-201ENST00000388789 MYOM2P54296 1465 aa11.37□□□□□ -0.59
TTC41P-201ENST00000388789 TMF1P82094 1093 aa11.37□□□□□ -0.59
TTC41P-201ENST00000388789 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
TTC41P-201ENST00000388789 MAMSTRQ6ZN01 415 aa11.37□□□□□ -0.59
TTC41P-201ENST00000388789 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
TTC41P-201ENST00000388789 ARHGEF40Q8TER5 1519 aa11.37□□□□□ -0.59
TTC41P-201ENST00000388789 DIP2CQ9Y2E4 1556 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
TTC41P-201ENST00000388789 RALBP1Q15311 655 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 GGT6Q6P531 493 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 ABCC3O15438 1527 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
TTC41P-201ENST00000388789 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
TTC41P-201ENST00000388789 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
TTC41P-201ENST00000388789 IFT172Q9UG01 1749 aa11.34□□□□□ -0.59
TTC41P-201ENST00000388789 NPATQ14207 1427 aa11.34□□□□□ -0.59
TTC41P-201ENST00000388789 RPGRIP1LQ68CZ1 1315 aa11.34□□□□□ -0.59
TTC41P-201ENST00000388789 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
TTC41P-201ENST00000388789 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
TTC41P-201ENST00000388789 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
TTC41P-201ENST00000388789 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
TTC41P-201ENST00000388789 ARHGAP31Q2M1Z3 1444 aa11.33□□□□□ -0.6
TTC41P-201ENST00000388789 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
TTC41P-201ENST00000388789 C7P10643 843 aa11.33□□□□□ -0.6
TTC41P-201ENST00000388789 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms