RNA–Protein interactions for RNA: ENST00000383960.1

RNU1-109P-201, Transcript of RNA, U1 small nuclear 109, pseudogene, humanhuman

BASIC

Gene RNU1-109P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-109P-201ENST00000383960 KDM4FA0A1W2PPD8 638 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 ZMYND10O75800 440 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 OSBPP22059 807 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 CASC1Q6TDU7 716 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 C3orf67Q6ZVT6 689 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 FAM9BQ8IZU0 186 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 CCER1Q8TC90 406 aaPredicted RBP3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 CADPSQ9ULU8 1353 aa3.6□□□□□ -1.83
RNU1-109P-201ENST00000383960 ZNF316A6NFI3 1004 aaPredicted RBP3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 TTC36A6NLP5 189 aa3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 GPR37O15354 613 aa3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 APPP05067 770 aa3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 MAP3K9P80192 1104 aa3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 GORABQ5T7V8 394 aa3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 RBM26Q5T8P6 1007 aaKnown RBP3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 NBPF11Q86T75 865 aa3.59□□□□□ -1.83
RNU1-109P-201ENST00000383960 EVI5O60447 810 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 ERCC3P19447 782 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 CALRP27797 417 aaKnown RBP3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 ANP32AP39687 249 aaKnown RBP3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 PRIM1P49642 420 aaKnown RBP3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 CALD1Q05682 793 aaKnown RBP3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 NBPF1Q3BBV0 1214 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 NBPF20Q3BBV1 942 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 BARGINQ6ZT62 677 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 CCDC82Q8N4S0 544 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 UPF1Q92900 1129 aaKnown RBP eCLIP3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 FBXW7Q969H0 707 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 HDAC5Q9UQL6 1122 aa3.58□□□□□ -1.84
RNU1-109P-201ENST00000383960 TPD52L2O43399 206 aaKnown RBP3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 ANP32CO43423 234 aa3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 NRDCO43847 1150 aa3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 HOXB3P14651 431 aaPredicted RBP3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 IRX3P78415 501 aaPredicted RBP3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 HSP90AA2PQ14568 343 aaPredicted RBP3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 TSHZ1Q6ZSZ6 1077 aa3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.57□□□□□ -1.84
RNU1-109P-201ENST00000383960 SMARCA5O60264 1052 aaPredicted RBP3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 TBC1D12O60347 775 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 BRD1O95696 1058 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 RINLQ6ZS11 566 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 SGSM3Q96HU1 749 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 SPATA32Q96LK8 384 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 TERF2IPQ9NYB0 399 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 NOP58Q9Y2X3 529 aaKnown RBP3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 PCDHGA4Q9Y5G9 962 aa3.56□□□□□ -1.84
RNU1-109P-201ENST00000383960 CENPJQ9HC77 1338 aaPredicted RBP3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 MARCH6O60337 910 aa3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 RALBP1Q15311 655 aa3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 FOXD4L6Q3SYB3 417 aaPredicted RBP3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 CC2D1BQ5T0F9 858 aaKnown RBP3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 GPR153Q6NV75 609 aa3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 FOXD4L3Q6VB84 417 aaPredicted RBP3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 GPIHBP1Q8IV16 184 aa3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 SLC24A3Q9HC58 644 aa3.55□□□□□ -1.84
RNU1-109P-201ENST00000383960 GRXCR2A6NFK2 248 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 GOLIM4O00461 696 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 MYBPC2Q14324 1141 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 MAMSTRQ6ZN01 415 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 SLAIN1Q8ND83 568 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 DDX12PQ92771 950 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 ZSWIM6Q9HCJ5 1215 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 NPDC1Q9NQX5 325 aaPredicted RBP3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 RBM27Q9P2N5 1060 aaKnown RBP3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 AMOTL2Q9Y2J4 779 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 PPME1Q9Y570 386 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 PCDHGA10Q9Y5H3 936 aa3.54□□□□□ -1.84
RNU1-109P-201ENST00000383960 ANKRD62A6NC57 917 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 C11orf95C9JLR9 678 aaPredicted RBP3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 FOSBP53539 338 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 EN1Q05925 392 aaPredicted RBP3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 PTGDRQ13258 359 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 SETDB1Q15047 1291 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 NBPF9Q3BBW0 867 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 WDR78Q5VTH9 848 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 APBB1IPQ7Z5R6 666 aaPredicted RBP3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 OTUD5Q96G74 571 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 EPAS1Q99814 870 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 UBA5Q9GZZ9 404 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 SCUBE2Q9NQ36 999 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 PRDM4Q9UKN5 801 aa3.53□□□□□ -1.84
RNU1-109P-201ENST00000383960 TCERG1O14776 1098 aaKnown RBP3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 GNPATO15228 680 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 FCHSD2O94868 740 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 MCCD1P59942 119 aaPredicted RBP3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 HDAC1Q13547 482 aaPredicted RBP3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 HIC1Q14526 733 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 DOK7Q18PE1 504 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 HSP90AB3PQ58FF7 597 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 ARSIQ5FYB1 569 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 TAF3Q5VWG9 929 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 SDR16C5Q8N3Y7 309 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 NME8Q8N427 588 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 MORC4Q8TE76 937 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 KHSRPQ92945 711 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 JPH4Q96JJ6 628 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 MTA3Q9BTC8 594 aa3.52□□□□□ -1.85
RNU1-109P-201ENST00000383960 SH3BP1Q9Y3L3 701 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms