RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 CAMSAP1Q5T5Y3 1602 aa18.74■□□□□ 0.59
NEK4-202ENST00000383721 TET3O43151 1660 aa18.74■□□□□ 0.59
NEK4-202ENST00000383721 EFCAB6Q5THR3 1501 aa18.74■□□□□ 0.59
NEK4-202ENST00000383721 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
NEK4-202ENST00000383721 E9PCH4 1651 aa18.73■□□□□ 0.59
NEK4-202ENST00000383721 NPATQ14207 1427 aa18.73■□□□□ 0.59
NEK4-202ENST00000383721 ZC3H13Q5T200 1668 aaKnown RBP18.73■□□□□ 0.59
NEK4-202ENST00000383721 ZMYM3Q14202 1370 aa18.72■□□□□ 0.59
NEK4-202ENST00000383721 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
NEK4-202ENST00000383721 PRAG1Q86YV5 1406 aa18.72■□□□□ 0.59
NEK4-202ENST00000383721 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
NEK4-202ENST00000383721 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
NEK4-202ENST00000383721 FBXO31Q5XUX0 539 aaPredicted RBP18.72■□□□□ 0.59
NEK4-202ENST00000383721 SENP3-EIF4A1A0A087X0R7 540 aa18.71■□□□□ 0.59
NEK4-202ENST00000383721 KDM4FA0A1W2PPD8 638 aa18.71■□□□□ 0.59
NEK4-202ENST00000383721 RIMS1Q86UR5 1692 aaKnown RBP18.71■□□□□ 0.59
NEK4-202ENST00000383721 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
NEK4-202ENST00000383721 CFAP65Q6ZU64 1925 aaKnown RBP18.7■□□□□ 0.58
NEK4-202ENST00000383721 MYBBP1AQ9BQG0 1328 aaKnown RBP18.7■□□□□ 0.58
NEK4-202ENST00000383721 KTN1Q86UP2 1357 aaKnown RBP18.7■□□□□ 0.58
NEK4-202ENST00000383721 RALBP1Q15311 655 aa18.69■□□□□ 0.58
NEK4-202ENST00000383721 BRD4O60885 1362 aaPredicted RBP18.69■□□□□ 0.58
NEK4-202ENST00000383721 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
NEK4-202ENST00000383721 TRPM1Q7Z4N2 1603 aa18.68■□□□□ 0.58
NEK4-202ENST00000383721 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
NEK4-202ENST00000383721 ARHGAP31Q2M1Z3 1444 aa18.66■□□□□ 0.58
NEK4-202ENST00000383721 GPRASP1Q5JY77 1395 aa18.65■□□□□ 0.58
NEK4-202ENST00000383721 C3P01024 1663 aa18.65■□□□□ 0.58
NEK4-202ENST00000383721 MROH2AA6NES4 1674 aa18.65■□□□□ 0.58
NEK4-202ENST00000383721 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
NEK4-202ENST00000383721 PTPRMP28827 1452 aa18.63■□□□□ 0.57
NEK4-202ENST00000383721 ERVK-7P63135 1459 aa18.62■□□□□ 0.57
NEK4-202ENST00000383721 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
NEK4-202ENST00000383721 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
NEK4-202ENST00000383721 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
NEK4-202ENST00000383721 PTPRTO14522 1441 aa18.61■□□□□ 0.57
NEK4-202ENST00000383721 NOS1P29475 1434 aa18.61■□□□□ 0.57
NEK4-202ENST00000383721 SYNMO15061 1565 aa18.61■□□□□ 0.57
NEK4-202ENST00000383721 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
NEK4-202ENST00000383721 NLRP13Q86W25 1043 aa18.6■□□□□ 0.57
NEK4-202ENST00000383721 TESK2Q96S53 571 aa18.6■□□□□ 0.57
NEK4-202ENST00000383721 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.57
NEK4-202ENST00000383721 TRPM2O94759 1503 aa18.58■□□□□ 0.56
NEK4-202ENST00000383721 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.56
NEK4-202ENST00000383721 LAMC1P11047 1609 aa18.57■□□□□ 0.56
NEK4-202ENST00000383721 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
NEK4-202ENST00000383721 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
NEK4-202ENST00000383721 TNRQ92752 1358 aa18.55■□□□□ 0.56
NEK4-202ENST00000383721 IDI1Q13907 227 aa18.55■□□□□ 0.56
NEK4-202ENST00000383721 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
NEK4-202ENST00000383721 PANK3Q9H999 370 aa18.51■□□□□ 0.55
NEK4-202ENST00000383721 PIK3C2BO00750 1634 aa18.51■□□□□ 0.55
NEK4-202ENST00000383721 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
NEK4-202ENST00000383721 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
NEK4-202ENST00000383721 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
NEK4-202ENST00000383721 ERICH6Q7L0X2 663 aa18.5■□□□□ 0.55
NEK4-202ENST00000383721 SLC52A1Q9NWF4 448 aa18.5■□□□□ 0.55
NEK4-202ENST00000383721 TMF1P82094 1093 aa18.49■□□□□ 0.55
NEK4-202ENST00000383721 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
NEK4-202ENST00000383721 RCAN3Q9UKA8 241 aa18.48■□□□□ 0.55
NEK4-202ENST00000383721 MYO3AQ8NEV4 1616 aa18.47■□□□□ 0.55
NEK4-202ENST00000383721 CDCA7LQ96GN5 454 aa18.44■□□□□ 0.54
NEK4-202ENST00000383721 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
NEK4-202ENST00000383721 INSRP06213 1382 aa18.44■□□□□ 0.54
NEK4-202ENST00000383721 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
NEK4-202ENST00000383721 BLMP54132 1417 aaPredicted RBP18.44■□□□□ 0.54
NEK4-202ENST00000383721 NLRP1Q9C000 1473 aa18.44■□□□□ 0.54
NEK4-202ENST00000383721 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
NEK4-202ENST00000383721 MYO5BQ9ULV0 1848 aa18.43■□□□□ 0.54
NEK4-202ENST00000383721 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
NEK4-202ENST00000383721 KIF1BO60333 1816 aa18.42■□□□□ 0.54
NEK4-202ENST00000383721 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
NEK4-202ENST00000383721 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
NEK4-202ENST00000383721 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
NEK4-202ENST00000383721 SETD1BQ9UPS6 1966 aaKnown RBP18.41■□□□□ 0.54
NEK4-202ENST00000383721 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
NEK4-202ENST00000383721 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.54
NEK4-202ENST00000383721 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
NEK4-202ENST00000383721 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
NEK4-202ENST00000383721 ZNF142P52746 1687 aaPredicted RBP18.36■□□□□ 0.53
NEK4-202ENST00000383721 HSPA2P54652 639 aa18.36■□□□□ 0.53
NEK4-202ENST00000383721 SCAF11Q99590 1463 aaKnown RBP18.35■□□□□ 0.53
NEK4-202ENST00000383721 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
NEK4-202ENST00000383721 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
NEK4-202ENST00000383721 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
NEK4-202ENST00000383721 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
NEK4-202ENST00000383721 KNSTRNQ9Y448 316 aa18.34■□□□□ 0.53
NEK4-202ENST00000383721 LMTK3Q96Q04 1460 aa18.34■□□□□ 0.53
NEK4-202ENST00000383721 TMEM2Q9UHN6 1383 aa18.34■□□□□ 0.53
NEK4-202ENST00000383721 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
NEK4-202ENST00000383721 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
NEK4-202ENST00000383721 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
NEK4-202ENST00000383721 NEURL4Q96JN8 1562 aa18.33■□□□□ 0.53
NEK4-202ENST00000383721 LTKP29376 864 aa18.33■□□□□ 0.52
NEK4-202ENST00000383721 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
NEK4-202ENST00000383721 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
NEK4-202ENST00000383721 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
NEK4-202ENST00000383721 PLIN1O60240 522 aa18.32■□□□□ 0.52
NEK4-202ENST00000383721 ADGRF5Q8IZF2 1346 aa18.32■□□□□ 0.52
NEK4-202ENST00000383721 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms