RNA–Protein interactions for RNA: ENST00000382518.5

CD9-203, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CD9, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-203ENST00000382518 ADGRF5Q8IZF2 1346 aa23.54■■□□□ 1.36
CD9-203ENST00000382518 CCDC7Q96M83 1385 aa23.53■■□□□ 1.36
CD9-203ENST00000382518 C11orf95C9JLR9 678 aaPredicted RBP23.52■■□□□ 1.36
CD9-203ENST00000382518 ST20-MTHFSA0A0A6YYL1 179 aa23.51■■□□□ 1.35
CD9-203ENST00000382518 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
CD9-203ENST00000382518 TMEM131LA2VDJ0 1609 aa23.49■■□□□ 1.35
CD9-203ENST00000382518 PPLO60437 1756 aa23.49■■□□□ 1.35
CD9-203ENST00000382518 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
CD9-203ENST00000382518 KIF7Q2M1P5 1343 aa23.48■■□□□ 1.35
CD9-203ENST00000382518 VGFO15240 615 aaPredicted RBP23.48■■□□□ 1.35
CD9-203ENST00000382518 PIK3C2GO75747 1445 aa23.46■■□□□ 1.35
CD9-203ENST00000382518 CFAP70Q5T0N1 1121 aa23.46■■□□□ 1.35
CD9-203ENST00000382518 ZFYVE9O95405 1425 aa23.45■■□□□ 1.35
CD9-203ENST00000382518 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.34
CD9-203ENST00000382518 TNRQ92752 1358 aa23.44■■□□□ 1.34
CD9-203ENST00000382518 SCAF11Q99590 1463 aaKnown RBP23.43■■□□□ 1.34
CD9-203ENST00000382518 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
CD9-203ENST00000382518 POLR1AO95602 1720 aaPredicted RBP23.42■■□□□ 1.34
CD9-203ENST00000382518 A2ML1A8K2U0 1454 aa23.41■■□□□ 1.34
CD9-203ENST00000382518 IQGAP1P46940 1657 aa23.4■■□□□ 1.34
CD9-203ENST00000382518 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
CD9-203ENST00000382518 NUTM2DQ5VT03 806 aaPredicted RBP23.38■■□□□ 1.33
CD9-203ENST00000382518 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
CD9-203ENST00000382518 TESK2Q96S53 571 aa23.37■■□□□ 1.33
CD9-203ENST00000382518 MYO5BQ9ULV0 1848 aa23.37■■□□□ 1.33
CD9-203ENST00000382518 FER1L4A9Z1Z3 1794 aa23.36■■□□□ 1.33
CD9-203ENST00000382518 CEBPAP49715 358 aaPredicted RBP23.35■■□□□ 1.33
CD9-203ENST00000382518 ANP32CO43423 234 aa23.33■■□□□ 1.33
CD9-203ENST00000382518 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
CD9-203ENST00000382518 NLRP1Q9C000 1473 aa23.33■■□□□ 1.33
CD9-203ENST00000382518 C3P01024 1663 aa23.32■■□□□ 1.32
CD9-203ENST00000382518 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
CD9-203ENST00000382518 POLR3GLQ9BT43 218 aa23.32■■□□□ 1.32
CD9-203ENST00000382518 TMF1P82094 1093 aa23.31■■□□□ 1.32
CD9-203ENST00000382518 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
CD9-203ENST00000382518 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.3■■□□□ 1.32
CD9-203ENST00000382518 DISP3Q9P2K9 1392 aa23.28■■□□□ 1.32
CD9-203ENST00000382518 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
CD9-203ENST00000382518 HDGFP51858 240 aaKnown RBP23.27■■□□□ 1.32
CD9-203ENST00000382518 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
CD9-203ENST00000382518 TMEM2Q9UHN6 1383 aa23.24■■□□□ 1.31
CD9-203ENST00000382518 UBR1Q8IWV7 1749 aa23.24■■□□□ 1.31
CD9-203ENST00000382518 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
CD9-203ENST00000382518 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
CD9-203ENST00000382518 ADAMTSL3P82987 1691 aa23.23■■□□□ 1.31
CD9-203ENST00000382518 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
CD9-203ENST00000382518 MYO3AQ8NEV4 1616 aa23.22■■□□□ 1.31
CD9-203ENST00000382518 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
CD9-203ENST00000382518 SBNO2Q9Y2G9 1366 aa23.22■■□□□ 1.31
CD9-203ENST00000382518 ALKQ9UM73 1620 aa23.22■■□□□ 1.31
CD9-203ENST00000382518 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
CD9-203ENST00000382518 ASXL1Q8IXJ9 1541 aa23.2■■□□□ 1.3
CD9-203ENST00000382518 CCER2I3L3R5 266 aa23.2■■□□□ 1.3
CD9-203ENST00000382518 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
CD9-203ENST00000382518 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
CD9-203ENST00000382518 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.3
CD9-203ENST00000382518 PTPRMP28827 1452 aa23.14■■□□□ 1.3
CD9-203ENST00000382518 PRKRIP1Q9H875 184 aaPredicted RBP23.13■■□□□ 1.29
CD9-203ENST00000382518 STK26Q9P289 416 aa23.13■■□□□ 1.29
CD9-203ENST00000382518 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
CD9-203ENST00000382518 SLIT1O75093 1534 aa23.13■■□□□ 1.29
CD9-203ENST00000382518 EID1Q9Y6B2 187 aa23.12■■□□□ 1.29
CD9-203ENST00000382518 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
CD9-203ENST00000382518 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
CD9-203ENST00000382518 PLEKHG1Q9ULL1 1385 aa23.11■■□□□ 1.29
CD9-203ENST00000382518 LTKP29376 864 aa23.1■■□□□ 1.29
CD9-203ENST00000382518 TXNDC2Q86VQ3 553 aa23.1■■□□□ 1.29
CD9-203ENST00000382518 LRPPRCP42704 1394 aaKnown RBP23.1■■□□□ 1.29
CD9-203ENST00000382518 SETD1AO15047 1707 aaKnown RBP23.1■■□□□ 1.29
CD9-203ENST00000382518 QRICH2Q9H0J4 1663 aa23.1■■□□□ 1.29
CD9-203ENST00000382518 CEP170BQ9Y4F5 1589 aaPredicted RBP23.08■■□□□ 1.29
CD9-203ENST00000382518 BCANQ96GW7 911 aa23.07■■□□□ 1.28
CD9-203ENST00000382518 PANK3Q9H999 370 aa23.07■■□□□ 1.28
CD9-203ENST00000382518 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
CD9-203ENST00000382518 ABCC11Q96J66 1382 aa23.06■■□□□ 1.28
CD9-203ENST00000382518 DLC1Q96QB1 1528 aa23.06■■□□□ 1.28
CD9-203ENST00000382518 PER1O15534 1290 aaPredicted RBP23.06■■□□□ 1.28
CD9-203ENST00000382518 METP08581 1390 aa23.05■■□□□ 1.28
CD9-203ENST00000382518 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
CD9-203ENST00000382518 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
CD9-203ENST00000382518 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
CD9-203ENST00000382518 ADAMTS13Q76LX8 1427 aa23.04■■□□□ 1.28
CD9-203ENST00000382518 POGKQ9P215 609 aa23.04■■□□□ 1.28
CD9-203ENST00000382518 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
CD9-203ENST00000382518 SAFB2Q14151 953 aaKnown RBP eCLIP23.01■■□□□ 1.27
CD9-203ENST00000382518 MED14O60244 1454 aa23■■□□□ 1.27
CD9-203ENST00000382518 SIRT1Q96EB6 747 aa23■■□□□ 1.27
CD9-203ENST00000382518 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
CD9-203ENST00000382518 TULP4Q9NRJ4 1543 aa22.99■■□□□ 1.27
CD9-203ENST00000382518 TECPR2O15040 1411 aa22.99■■□□□ 1.27
CD9-203ENST00000382518 MYOM1P52179 1685 aa22.98■■□□□ 1.27
CD9-203ENST00000382518 RALBP1Q15311 655 aa22.98■■□□□ 1.27
CD9-203ENST00000382518 CENPBP07199 599 aaPredicted RBP22.97■■□□□ 1.27
CD9-203ENST00000382518 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
CD9-203ENST00000382518 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
CD9-203ENST00000382518 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
CD9-203ENST00000382518 MINK1Q8N4C8 1332 aaPredicted RBP22.96■■□□□ 1.27
CD9-203ENST00000382518 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.27
CD9-203ENST00000382518 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
CD9-203ENST00000382518 KNDC1Q76NI1 1749 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms