RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 CHD1O14646 1710 aa25.4■■□□□ 1.66
FOXC1-201ENST00000380874 CDC42BPBQ9Y5S2 1711 aa25.39■■□□□ 1.66
FOXC1-201ENST00000380874 GPRASP1Q5JY77 1395 aa25.38■■□□□ 1.65
FOXC1-201ENST00000380874 DEKP35659 375 aaKnown RBP25.38■■□□□ 1.65
FOXC1-201ENST00000380874 CFAP53Q96M91 514 aa25.38■■□□□ 1.65
FOXC1-201ENST00000380874 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
FOXC1-201ENST00000380874 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
FOXC1-201ENST00000380874 AMER1Q5JTC6 1135 aaPredicted RBP25.37■■□□□ 1.65
FOXC1-201ENST00000380874 SLC12A5Q9H2X9 1139 aa25.37■■□□□ 1.65
FOXC1-201ENST00000380874 FANCAO15360 1455 aa25.37■■□□□ 1.65
FOXC1-201ENST00000380874 SRPK2P78362 688 aaKnown RBP25.37■■□□□ 1.65
FOXC1-201ENST00000380874 U2SURPO15042 1029 aaKnown RBP25.36■■□□□ 1.65
FOXC1-201ENST00000380874 ADGRL1O94910 1474 aa25.34■■□□□ 1.65
FOXC1-201ENST00000380874 BCL11AQ9H165 835 aa25.34■■□□□ 1.65
FOXC1-201ENST00000380874 POGKQ9P215 609 aa25.32■■□□□ 1.64
FOXC1-201ENST00000380874 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
FOXC1-201ENST00000380874 U2AF1L5P0DN76 240 aaPredicted RBP25.32■■□□□ 1.64
FOXC1-201ENST00000380874 U2AF1Q01081 240 aaKnown RBP eCLIP25.32■■□□□ 1.64
FOXC1-201ENST00000380874 RAPGEF3O95398 923 aa25.32■■□□□ 1.64
FOXC1-201ENST00000380874 BCL2L13Q9BXK5 485 aa25.31■■□□□ 1.64
FOXC1-201ENST00000380874 SCAF11Q99590 1463 aaKnown RBP25.31■■□□□ 1.64
FOXC1-201ENST00000380874 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
FOXC1-201ENST00000380874 MYO5CQ9NQX4 1742 aa25.3■■□□□ 1.64
FOXC1-201ENST00000380874 BCAR3O75815 825 aa25.3■■□□□ 1.64
FOXC1-201ENST00000380874 NEFMP07197 916 aa25.3■■□□□ 1.64
FOXC1-201ENST00000380874 SLC4A3P48751 1232 aa25.28■■□□□ 1.64
FOXC1-201ENST00000380874 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
FOXC1-201ENST00000380874 CLUAP1Q96AJ1 413 aa25.27■■□□□ 1.64
FOXC1-201ENST00000380874 DUSP27Q5VZP5 1158 aa25.27■■□□□ 1.64
FOXC1-201ENST00000380874 MLECQ14165 292 aa25.26■■□□□ 1.63
FOXC1-201ENST00000380874 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
FOXC1-201ENST00000380874 E9PSI1 815 aa25.26■■□□□ 1.63
FOXC1-201ENST00000380874 COG6Q9Y2V7 657 aa25.25■■□□□ 1.63
FOXC1-201ENST00000380874 PLEKHH1Q9ULM0 1364 aa25.25■■□□□ 1.63
FOXC1-201ENST00000380874 CABP2Q9NPB3 220 aa25.24■■□□□ 1.63
FOXC1-201ENST00000380874 DDRGK1Q96HY6 314 aa25.24■■□□□ 1.63
FOXC1-201ENST00000380874 CENPQQ7L2Z9 268 aaPredicted RBP25.23■■□□□ 1.63
FOXC1-201ENST00000380874 BACH2Q9BYV9 841 aa25.23■■□□□ 1.63
FOXC1-201ENST00000380874 MS4A1P11836 297 aa25.23■■□□□ 1.63
FOXC1-201ENST00000380874 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
FOXC1-201ENST00000380874 MTHFSP49914 203 aa25.22■■□□□ 1.63
FOXC1-201ENST00000380874 SLFN5Q08AF3 891 aa25.22■■□□□ 1.63
FOXC1-201ENST00000380874 TRPM1Q7Z4N2 1603 aa25.22■■□□□ 1.63
FOXC1-201ENST00000380874 MAGI2Q86UL8 1455 aa25.22■■□□□ 1.63
FOXC1-201ENST00000380874 CARD14Q9BXL6 1004 aa25.21■■□□□ 1.63
FOXC1-201ENST00000380874 WDR7Q9Y4E6 1490 aa25.21■■□□□ 1.63
FOXC1-201ENST00000380874 PANK1Q8TE04 598 aa25.2■■□□□ 1.62
FOXC1-201ENST00000380874 NOS1P29475 1434 aa25.2■■□□□ 1.62
FOXC1-201ENST00000380874 VGFO15240 615 aaPredicted RBP25.19■■□□□ 1.62
FOXC1-201ENST00000380874 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
FOXC1-201ENST00000380874 ATP10AO60312 1499 aa25.19■■□□□ 1.62
FOXC1-201ENST00000380874 ASXL2Q76L83 1435 aa25.18■■□□□ 1.62
FOXC1-201ENST00000380874 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
FOXC1-201ENST00000380874 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
FOXC1-201ENST00000380874 TCP11L2Q8N4U5 519 aa25.17■■□□□ 1.62
FOXC1-201ENST00000380874 SPINK5Q9NQ38 1064 aaPredicted RBP25.17■■□□□ 1.62
FOXC1-201ENST00000380874 FTSJ3Q8IY81 847 aaKnown RBP25.17■■□□□ 1.62
FOXC1-201ENST00000380874 EVC2Q86UK5 1308 aa25.17■■□□□ 1.62
FOXC1-201ENST00000380874 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
FOXC1-201ENST00000380874 ZCCHC11Q5TAX3 1644 aaKnown RBP25.16■■□□□ 1.62
FOXC1-201ENST00000380874 ABCC1P33527 1531 aa25.16■■□□□ 1.62
FOXC1-201ENST00000380874 PRDM15P57071 1507 aaPredicted RBP25.16■■□□□ 1.62
FOXC1-201ENST00000380874 UNC13BO14795 1591 aa25.16■■□□□ 1.62
FOXC1-201ENST00000380874 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
FOXC1-201ENST00000380874 NSD3Q9BZ95 1437 aa25.15■■□□□ 1.62
FOXC1-201ENST00000380874 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
FOXC1-201ENST00000380874 IQGAP3Q86VI3 1631 aa25.14■■□□□ 1.62
FOXC1-201ENST00000380874 CD109Q6YHK3 1445 aa25.13■■□□□ 1.61
FOXC1-201ENST00000380874 ASXL1Q8IXJ9 1541 aa25.13■■□□□ 1.61
FOXC1-201ENST00000380874 UGGT1Q9NYU2 1555 aa25.12■■□□□ 1.61
FOXC1-201ENST00000380874 RUNDC1Q96C34 613 aa25.12■■□□□ 1.61
FOXC1-201ENST00000380874 PLXNC1O60486 1568 aa25.11■■□□□ 1.61
FOXC1-201ENST00000380874 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
FOXC1-201ENST00000380874 ATP7AQ04656 1500 aa25.11■■□□□ 1.61
FOXC1-201ENST00000380874 FAM161AQ3B820 660 aa25.1■■□□□ 1.61
FOXC1-201ENST00000380874 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
FOXC1-201ENST00000380874 WWC1Q8IX03 1113 aa25.1■■□□□ 1.61
FOXC1-201ENST00000380874 DMRT2Q9Y5R5 561 aa25.09■■□□□ 1.61
FOXC1-201ENST00000380874 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.08■■□□□ 1.61
FOXC1-201ENST00000380874 UPF2Q9HAU5 1272 aaKnown RBP25.08■■□□□ 1.61
FOXC1-201ENST00000380874 C14orf93Q9H972 538 aaKnown RBP25.06■■□□□ 1.6
FOXC1-201ENST00000380874 MYH16Q9H6N6 1097 aa25.05■■□□□ 1.6
FOXC1-201ENST00000380874 UHRF1BP1LA0JNW5 1464 aa25.04■■□□□ 1.6
FOXC1-201ENST00000380874 IDI1Q13907 227 aa25.03■■□□□ 1.6
FOXC1-201ENST00000380874 SMC4Q9NTJ3 1288 aa25.03■■□□□ 1.6
FOXC1-201ENST00000380874 TERF2IPQ9NYB0 399 aa25.03■■□□□ 1.6
FOXC1-201ENST00000380874 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
FOXC1-201ENST00000380874 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
FOXC1-201ENST00000380874 ZFYVE16Q7Z3T8 1539 aa25.01■■□□□ 1.59
FOXC1-201ENST00000380874 PRAM1Q96QH2 718 aa25.01■■□□□ 1.59
FOXC1-201ENST00000380874 TRPM2O94759 1503 aa25.01■■□□□ 1.59
FOXC1-201ENST00000380874 PTPRTO14522 1441 aa25■■□□□ 1.59
FOXC1-201ENST00000380874 TSR2Q969E8 191 aaKnown RBP25■■□□□ 1.59
FOXC1-201ENST00000380874 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
FOXC1-201ENST00000380874 NGEFQ8N5V2 710 aa24.98■■□□□ 1.59
FOXC1-201ENST00000380874 NKTRP30414 1462 aaKnown RBP24.98■■□□□ 1.59
FOXC1-201ENST00000380874 ITPRIPQ8IWB1 547 aa24.98■■□□□ 1.59
FOXC1-201ENST00000380874 CLTCL1P53675 1640 aa24.97■■□□□ 1.59
FOXC1-201ENST00000380874 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
FOXC1-201ENST00000380874 E9PCH4 1651 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms