RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 GGT6Q6P531 493 aa26.47■■□□□ 1.83
GMDS-201ENST00000380805 SYNMO15061 1565 aa26.46■■□□□ 1.83
GMDS-201ENST00000380805 WASHC2CQ9Y4E1 1318 aa26.45■■□□□ 1.82
GMDS-201ENST00000380805 AGLP35573 1532 aa26.44■■□□□ 1.82
GMDS-201ENST00000380805 MLECQ14165 292 aa26.44■■□□□ 1.82
GMDS-201ENST00000380805 DISP3Q9P2K9 1392 aa26.43■■□□□ 1.82
GMDS-201ENST00000380805 SETBP1Q9Y6X0 1596 aa26.43■■□□□ 1.82
GMDS-201ENST00000380805 CFAP65Q6ZU64 1925 aaKnown RBP26.43■■□□□ 1.82
GMDS-201ENST00000380805 CCDC184Q52MB2 194 aa26.42■■□□□ 1.82
GMDS-201ENST00000380805 MYO3AQ8NEV4 1616 aa26.4■■□□□ 1.82
GMDS-201ENST00000380805 POLR3GLQ9BT43 218 aa26.4■■□□□ 1.82
GMDS-201ENST00000380805 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
GMDS-201ENST00000380805 TMF1P82094 1093 aa26.38■■□□□ 1.81
GMDS-201ENST00000380805 EIF3AQ14152 1382 aaKnown RBP26.37■■□□□ 1.81
GMDS-201ENST00000380805 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
GMDS-201ENST00000380805 RPGRIP1LQ68CZ1 1315 aa26.37■■□□□ 1.81
GMDS-201ENST00000380805 PIK3C2GO75747 1445 aa26.35■■□□□ 1.81
GMDS-201ENST00000380805 ADGRF5Q8IZF2 1346 aa26.35■■□□□ 1.81
GMDS-201ENST00000380805 NEXMIFQ5QGS0 1516 aa26.32■■□□□ 1.8
GMDS-201ENST00000380805 PER1O15534 1290 aaPredicted RBP26.31■■□□□ 1.8
GMDS-201ENST00000380805 RALBP1Q15311 655 aa26.31■■□□□ 1.8
GMDS-201ENST00000380805 PARD3Q8TEW0 1356 aa26.3■■□□□ 1.8
GMDS-201ENST00000380805 MYOM1P52179 1685 aa26.3■■□□□ 1.8
GMDS-201ENST00000380805 HNRNPUQ00839 825 aaKnown RBP eCLIP26.3■■□□□ 1.8
GMDS-201ENST00000380805 ADGRB1O14514 1584 aa26.3■■□□□ 1.8
GMDS-201ENST00000380805 KDM5AP29375 1690 aaKnown RBP26.29■■□□□ 1.8
GMDS-201ENST00000380805 SBNO2Q9Y2G9 1366 aa26.28■■□□□ 1.8
GMDS-201ENST00000380805 PPP6R1Q9UPN7 881 aa26.28■■□□□ 1.8
GMDS-201ENST00000380805 SLC24A1O60721 1099 aa26.28■■□□□ 1.8
GMDS-201ENST00000380805 BRD4O60885 1362 aaPredicted RBP26.27■■□□□ 1.8
GMDS-201ENST00000380805 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
GMDS-201ENST00000380805 CDCA8Q53HL2 280 aa26.26■■□□□ 1.79
GMDS-201ENST00000380805 TMEM131LA2VDJ0 1609 aa26.26■■□□□ 1.79
GMDS-201ENST00000380805 MYBBP1AQ9BQG0 1328 aaKnown RBP26.26■■□□□ 1.79
GMDS-201ENST00000380805 ZFYVE9O95405 1425 aa26.25■■□□□ 1.79
GMDS-201ENST00000380805 SLC52A1Q9NWF4 448 aa26.25■■□□□ 1.79
GMDS-201ENST00000380805 ADAMTSL3P82987 1691 aa26.24■■□□□ 1.79
GMDS-201ENST00000380805 MYO5BQ9ULV0 1848 aa26.23■■□□□ 1.79
GMDS-201ENST00000380805 C14orf93Q9H972 538 aaKnown RBP26.22■■□□□ 1.79
GMDS-201ENST00000380805 ERVK-7P63135 1459 aa26.22■■□□□ 1.79
GMDS-201ENST00000380805 KDM4FA0A1W2PPD8 638 aa26.22■■□□□ 1.79
GMDS-201ENST00000380805 SUPT16HQ9Y5B9 1047 aaKnown RBP26.22■■□□□ 1.79
GMDS-201ENST00000380805 ZBED9Q6R2W3 1325 aa26.22■■□□□ 1.79
GMDS-201ENST00000380805 FAM9BQ8IZU0 186 aa26.21■■□□□ 1.79
GMDS-201ENST00000380805 CLTCQ00610 1675 aaKnown RBP26.2■■□□□ 1.78
GMDS-201ENST00000380805 FER1L4A9Z1Z3 1794 aa26.2■■□□□ 1.78
GMDS-201ENST00000380805 LRPPRCP42704 1394 aaKnown RBP26.19■■□□□ 1.78
GMDS-201ENST00000380805 ESF1Q9H501 851 aaKnown RBP26.19■■□□□ 1.78
GMDS-201ENST00000380805 SPATA31D1Q6ZQQ2 1576 aa26.18■■□□□ 1.78
GMDS-201ENST00000380805 CHGAP10645 457 aaKnown RBP26.18■■□□□ 1.78
GMDS-201ENST00000380805 PANK3Q9H999 370 aa26.18■■□□□ 1.78
GMDS-201ENST00000380805 PNISRQ8TF01 805 aaKnown RBP26.17■■□□□ 1.78
GMDS-201ENST00000380805 QRICH2Q9H0J4 1663 aa26.17■■□□□ 1.78
GMDS-201ENST00000380805 IDI1Q13907 227 aa26.16■■□□□ 1.78
GMDS-201ENST00000380805 RIMS1Q86UR5 1692 aaKnown RBP26.15■■□□□ 1.78
GMDS-201ENST00000380805 ARHGEF28Q8N1W1 1705 aaKnown RBP26.14■■□□□ 1.78
GMDS-201ENST00000380805 VGFO15240 615 aaPredicted RBP26.14■■□□□ 1.77
GMDS-201ENST00000380805 NLRP13Q86W25 1043 aa26.14■■□□□ 1.77
GMDS-201ENST00000380805 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
GMDS-201ENST00000380805 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
GMDS-201ENST00000380805 TMC1Q8TDI8 760 aa26.12■■□□□ 1.77
GMDS-201ENST00000380805 NPC1L1Q9UHC9 1359 aa26.12■■□□□ 1.77
GMDS-201ENST00000380805 PLPPR3Q6T4P5 718 aa26.11■■□□□ 1.77
GMDS-201ENST00000380805 INSRP06213 1382 aa26.1■■□□□ 1.77
GMDS-201ENST00000380805 ASXL1Q8IXJ9 1541 aa26.1■■□□□ 1.77
GMDS-201ENST00000380805 CENPJQ9HC77 1338 aaPredicted RBP26.09■■□□□ 1.77
GMDS-201ENST00000380805 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
GMDS-201ENST00000380805 C3P01024 1663 aa26.06■■□□□ 1.76
GMDS-201ENST00000380805 PTPRMP28827 1452 aa26.05■■□□□ 1.76
GMDS-201ENST00000380805 CNGB1Q14028 1251 aaPredicted RBP26.05■■□□□ 1.76
GMDS-201ENST00000380805 AMER1Q5JTC6 1135 aaPredicted RBP26.03■■□□□ 1.76
GMDS-201ENST00000380805 KNSTRNQ9Y448 316 aa26■■□□□ 1.75
GMDS-201ENST00000380805 A2ML1A8K2U0 1454 aa26■■□□□ 1.75
GMDS-201ENST00000380805 CC2D1BQ5T0F9 858 aaKnown RBP26■■□□□ 1.75
GMDS-201ENST00000380805 NEFLP07196 543 aa25.99■■□□□ 1.75
GMDS-201ENST00000380805 PUS7Q96PZ0 661 aaKnown RBP25.99■■□□□ 1.75
GMDS-201ENST00000380805 SMG6Q86US8 1419 aaKnown RBP25.98■■□□□ 1.75
GMDS-201ENST00000380805 TRAK1Q9UPV9 953 aa25.97■■□□□ 1.75
GMDS-201ENST00000380805 USP32Q8NFA0 1604 aa25.97■■□□□ 1.75
GMDS-201ENST00000380805 FKBP8Q14318 412 aa25.97■■□□□ 1.75
GMDS-201ENST00000380805 TMEM132EQ6IEE7 984 aa25.96■■□□□ 1.75
GMDS-201ENST00000380805 ALKQ9UM73 1620 aa25.96■■□□□ 1.75
GMDS-201ENST00000380805 SETD1AO15047 1707 aaKnown RBP25.96■■□□□ 1.75
GMDS-201ENST00000380805 TULP4Q9NRJ4 1543 aa25.95■■□□□ 1.75
GMDS-201ENST00000380805 BLMP54132 1417 aaPredicted RBP25.94■■□□□ 1.74
GMDS-201ENST00000380805 NUTM2DQ5VT03 806 aaPredicted RBP25.9■■□□□ 1.74
GMDS-201ENST00000380805 PPP2R1AP30153 589 aa25.88■■□□□ 1.73
GMDS-201ENST00000380805 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
GMDS-201ENST00000380805 TNRQ92752 1358 aa25.88■■□□□ 1.73
GMDS-201ENST00000380805 DLC1Q96QB1 1528 aa25.87■■□□□ 1.73
GMDS-201ENST00000380805 RIMS2Q9UQ26 1411 aa25.86■■□□□ 1.73
GMDS-201ENST00000380805 CARD14Q9BXL6 1004 aa25.86■■□□□ 1.73
GMDS-201ENST00000380805 NRXN3Q9Y4C0 1643 aa25.86■■□□□ 1.73
GMDS-201ENST00000380805 EVC2Q86UK5 1308 aa25.85■■□□□ 1.73
GMDS-201ENST00000380805 ERICH6BQ5W0A0 696 aa25.85■■□□□ 1.73
GMDS-201ENST00000380805 NUDCQ9Y266 331 aa25.85■■□□□ 1.73
GMDS-201ENST00000380805 SETD1BQ9UPS6 1966 aaKnown RBP25.83■■□□□ 1.73
GMDS-201ENST00000380805 NINLQ9Y2I6 1382 aa25.82■■□□□ 1.72
GMDS-201ENST00000380805 UBR1Q8IWV7 1749 aa25.82■■□□□ 1.72
GMDS-201ENST00000380805 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms