RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SYNMO15061 1565 aa21.55■■□□□ 1.04
VPS16-203ENST00000380469 PAK3O75914 559 aaPredicted RBP21.55■■□□□ 1.04
VPS16-203ENST00000380469 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
VPS16-203ENST00000380469 ZBTB47Q9UFB7 747 aaPredicted RBP21.54■■□□□ 1.04
VPS16-203ENST00000380469 PLIN1O60240 522 aa21.54■■□□□ 1.04
VPS16-203ENST00000380469 MS4A1P11836 297 aa21.52■■□□□ 1.04
VPS16-203ENST00000380469 SLC24A1O60721 1099 aa21.51■■□□□ 1.03
VPS16-203ENST00000380469 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
VPS16-203ENST00000380469 ASXL1Q8IXJ9 1541 aa21.51■■□□□ 1.03
VPS16-203ENST00000380469 KIF3BO15066 747 aa21.5■■□□□ 1.03
VPS16-203ENST00000380469 CRBNQ96SW2 442 aa21.5■■□□□ 1.03
VPS16-203ENST00000380469 FANCAO15360 1455 aa21.5■■□□□ 1.03
VPS16-203ENST00000380469 KIAA1210Q9ULL0 1709 aa21.49■■□□□ 1.03
VPS16-203ENST00000380469 PDE4AP27815 886 aa21.49■■□□□ 1.03
VPS16-203ENST00000380469 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
VPS16-203ENST00000380469 NPC1L1Q9UHC9 1359 aa21.48■■□□□ 1.03
VPS16-203ENST00000380469 VWDEQ8N2E2 1590 aa21.48■■□□□ 1.03
VPS16-203ENST00000380469 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
VPS16-203ENST00000380469 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
VPS16-203ENST00000380469 NEURL4Q96JN8 1562 aa21.46■■□□□ 1.03
VPS16-203ENST00000380469 ABCA9Q8IUA7 1624 aa21.46■■□□□ 1.03
VPS16-203ENST00000380469 GOLGA2Q08379 1002 aa21.45■■□□□ 1.02
VPS16-203ENST00000380469 PLEKHH1Q9ULM0 1364 aa21.45■■□□□ 1.02
VPS16-203ENST00000380469 BACH2Q9BYV9 841 aa21.45■■□□□ 1.02
VPS16-203ENST00000380469 KDM5AP29375 1690 aaKnown RBP21.44■■□□□ 1.02
VPS16-203ENST00000380469 NBR1Q14596 966 aa21.44■■□□□ 1.02
VPS16-203ENST00000380469 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
VPS16-203ENST00000380469 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
VPS16-203ENST00000380469 ADGRL1O94910 1474 aa21.43■■□□□ 1.02
VPS16-203ENST00000380469 MYOM1P52179 1685 aa21.43■■□□□ 1.02
VPS16-203ENST00000380469 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
VPS16-203ENST00000380469 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.42■■□□□ 1.02
VPS16-203ENST00000380469 ZNF521Q96K83 1311 aa21.42■■□□□ 1.02
VPS16-203ENST00000380469 MYOM2P54296 1465 aa21.41■■□□□ 1.02
VPS16-203ENST00000380469 MAP3K4Q9Y6R4 1608 aa21.41■■□□□ 1.02
VPS16-203ENST00000380469 C20orf194Q5TEA3 1177 aa21.39■■□□□ 1.02
VPS16-203ENST00000380469 DEKP35659 375 aaKnown RBP21.39■■□□□ 1.01
VPS16-203ENST00000380469 KIF1BO60333 1816 aa21.39■■□□□ 1.01
VPS16-203ENST00000380469 ADGRF5Q8IZF2 1346 aa21.38■■□□□ 1.01
VPS16-203ENST00000380469 SLFN5Q08AF3 891 aa21.38■■□□□ 1.01
VPS16-203ENST00000380469 ABCA6Q8N139 1617 aa21.36■■□□□ 1.01
VPS16-203ENST00000380469 MROH1Q8NDA8 1641 aa21.36■■□□□ 1.01
VPS16-203ENST00000380469 ERVK-7P63135 1459 aa21.36■■□□□ 1.01
VPS16-203ENST00000380469 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
VPS16-203ENST00000380469 UGGT1Q9NYU2 1555 aa21.35■■□□□ 1.01
VPS16-203ENST00000380469 RTL5Q5HYW3 569 aaPredicted RBP21.35■■□□□ 1.01
VPS16-203ENST00000380469 EFCAB6Q5THR3 1501 aa21.35■■□□□ 1.01
VPS16-203ENST00000380469 CENPQQ7L2Z9 268 aaPredicted RBP21.34■■□□□ 1.01
VPS16-203ENST00000380469 APAF1O14727 1248 aa21.33■■□□□ 1
VPS16-203ENST00000380469 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1
VPS16-203ENST00000380469 KDM2BQ8NHM5 1336 aa21.32■■□□□ 1
VPS16-203ENST00000380469 NGEFQ8N5V2 710 aa21.32■■□□□ 1
VPS16-203ENST00000380469 CARD14Q9BXL6 1004 aa21.31■■□□□ 1
VPS16-203ENST00000380469 ASXL2Q76L83 1435 aa21.31■■□□□ 1
VPS16-203ENST00000380469 IFT172Q9UG01 1749 aa21.31■■□□□ 1
VPS16-203ENST00000380469 NRXN1Q9ULB1 1477 aa21.29■■□□□ 1
VPS16-203ENST00000380469 LMTK2Q8IWU2 1503 aa21.29■■□□□ 1
VPS16-203ENST00000380469 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
VPS16-203ENST00000380469 PPRC1Q5VV67 1664 aaKnown RBP21.29■■□□□ 1
VPS16-203ENST00000380469 E9PSI1 815 aa21.29■■□□□ 1
VPS16-203ENST00000380469 KIDINS220Q9ULH0 1771 aa21.29■■□□□ 1
VPS16-203ENST00000380469 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
VPS16-203ENST00000380469 CHGAP10645 457 aaKnown RBP21.28■■□□□ 1
VPS16-203ENST00000380469 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
VPS16-203ENST00000380469 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
VPS16-203ENST00000380469 MYO3AQ8NEV4 1616 aa21.27■■□□□ 1
VPS16-203ENST00000380469 MROH2AA6NES4 1674 aa21.27■■□□□ 1
VPS16-203ENST00000380469 SKAP1Q86WV1 359 aa21.27■■□□□ 1
VPS16-203ENST00000380469 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
VPS16-203ENST00000380469 NOS1P29475 1434 aa21.26■□□□□ 0.99
VPS16-203ENST00000380469 SETBP1Q9Y6X0 1596 aa21.25■□□□□ 0.99
VPS16-203ENST00000380469 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
VPS16-203ENST00000380469 ADGRB3O60242 1522 aa21.24■□□□□ 0.99
VPS16-203ENST00000380469 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
VPS16-203ENST00000380469 NPM1P06748 294 aaKnown RBP eCLIP21.22■□□□□ 0.99
VPS16-203ENST00000380469 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
VPS16-203ENST00000380469 TRAK1Q9UPV9 953 aa21.22■□□□□ 0.99
VPS16-203ENST00000380469 C14orf93Q9H972 538 aaKnown RBP21.21■□□□□ 0.99
VPS16-203ENST00000380469 BCAR3O75815 825 aa21.2■□□□□ 0.98
VPS16-203ENST00000380469 FAM161AQ3B820 660 aa21.2■□□□□ 0.98
VPS16-203ENST00000380469 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
VPS16-203ENST00000380469 RPGRIP1LQ68CZ1 1315 aa21.19■□□□□ 0.98
VPS16-203ENST00000380469 NSD3Q9BZ95 1437 aa21.19■□□□□ 0.98
VPS16-203ENST00000380469 GGT6Q6P531 493 aa21.18■□□□□ 0.98
VPS16-203ENST00000380469 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
VPS16-203ENST00000380469 NPATQ14207 1427 aa21.17■□□□□ 0.98
VPS16-203ENST00000380469 WWC1Q8IX03 1113 aa21.17■□□□□ 0.98
VPS16-203ENST00000380469 USP35Q9P2H5 1018 aa21.17■□□□□ 0.98
VPS16-203ENST00000380469 PPLO60437 1756 aa21.16■□□□□ 0.98
VPS16-203ENST00000380469 CFAP74Q9C0B2 1584 aa21.16■□□□□ 0.98
VPS16-203ENST00000380469 SLC12A5Q9H2X9 1139 aa21.16■□□□□ 0.98
VPS16-203ENST00000380469 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
VPS16-203ENST00000380469 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
VPS16-203ENST00000380469 QRICH2Q9H0J4 1663 aa21.15■□□□□ 0.98
VPS16-203ENST00000380469 CD109Q6YHK3 1445 aa21.15■□□□□ 0.98
VPS16-203ENST00000380469 POGZQ7Z3K3 1410 aa21.15■□□□□ 0.98
VPS16-203ENST00000380469 NINLQ9Y2I6 1382 aa21.14■□□□□ 0.98
VPS16-203ENST00000380469 CFAP65Q6ZU64 1925 aaKnown RBP21.14■□□□□ 0.98
VPS16-203ENST00000380469 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.97
VPS16-203ENST00000380469 NEFMP07197 916 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms