RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CD109Q6YHK3 1445 aa10.83□□□□□ -0.68
PDLIM5-204ENST00000380176 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
PDLIM5-204ENST00000380176 IQGAP1P46940 1657 aa10.82□□□□□ -0.68
PDLIM5-204ENST00000380176 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-204ENST00000380176 MYBBP1AQ9BQG0 1328 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-204ENST00000380176 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-204ENST00000380176 PPRC1Q5VV67 1664 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-204ENST00000380176 RALBP1Q15311 655 aa10.81□□□□□ -0.68
PDLIM5-204ENST00000380176 EFCAB6Q5THR3 1501 aa10.8□□□□□ -0.68
PDLIM5-204ENST00000380176 TMF1P82094 1093 aa10.8□□□□□ -0.68
PDLIM5-204ENST00000380176 PANK3Q9H999 370 aa10.8□□□□□ -0.68
PDLIM5-204ENST00000380176 BRD4O60885 1362 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-204ENST00000380176 PARD3Q8TEW0 1356 aa10.8□□□□□ -0.68
PDLIM5-204ENST00000380176 POGZQ7Z3K3 1410 aa10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 FRMPD1Q5SYB0 1578 aa10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 KIF1BO60333 1816 aa10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 CC2D1BQ5T0F9 858 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
PDLIM5-204ENST00000380176 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
PDLIM5-204ENST00000380176 ADGRF5Q8IZF2 1346 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 ABCA6Q8N139 1617 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 GGT6Q6P531 493 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 HECW2Q9P2P5 1572 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 SCAF11Q99590 1463 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 MLH3Q9UHC1 1453 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 MAP3K4Q9Y6R4 1608 aa10.77□□□□□ -0.69
PDLIM5-204ENST00000380176 IFT172Q9UG01 1749 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 CFAP70Q5T0N1 1121 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 NLRP13Q86W25 1043 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 DMRT2Q9Y5R5 561 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 SMG6Q86US8 1419 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 NEURL4Q96JN8 1562 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 LMTK2Q8IWU2 1503 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 STAC3Q96MF2 364 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 PODXL2Q9NZ53 605 aa10.76□□□□□ -0.69
PDLIM5-204ENST00000380176 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
PDLIM5-204ENST00000380176 NUDCQ9Y266 331 aa10.74□□□□□ -0.69
PDLIM5-204ENST00000380176 NPATQ14207 1427 aa10.74□□□□□ -0.69
PDLIM5-204ENST00000380176 WASHC2CQ9Y4E1 1318 aa10.73□□□□□ -0.69
PDLIM5-204ENST00000380176 MYOM1P52179 1685 aa10.73□□□□□ -0.69
PDLIM5-204ENST00000380176 MYOM2P54296 1465 aa10.73□□□□□ -0.69
PDLIM5-204ENST00000380176 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-204ENST00000380176 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-204ENST00000380176 SIGLEC1Q9BZZ2 1709 aa10.72□□□□□ -0.69
PDLIM5-204ENST00000380176 ADGRB3O60242 1522 aa10.72□□□□□ -0.69
PDLIM5-204ENST00000380176 CYB5RLQ6IPT4 315 aa10.71□□□□□ -0.69
PDLIM5-204ENST00000380176 NEO1Q92859 1461 aa10.71□□□□□ -0.69
PDLIM5-204ENST00000380176 RICTORQ6R327 1708 aa10.71□□□□□ -0.69
PDLIM5-204ENST00000380176 NOS1P29475 1434 aa10.71□□□□□ -0.69
PDLIM5-204ENST00000380176 ERICH6BQ5W0A0 696 aa10.71□□□□□ -0.69
PDLIM5-204ENST00000380176 PPP4R2Q9NY27 417 aa10.71□□□□□ -0.69
PDLIM5-204ENST00000380176 ABCC3O15438 1527 aa10.71□□□□□ -0.7
PDLIM5-204ENST00000380176 SYNMO15061 1565 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 DIP2CQ9Y2E4 1556 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 NRXN1Q9ULB1 1477 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 PPLO60437 1756 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 CAMSAP1Q5T5Y3 1602 aa10.7□□□□□ -0.7
PDLIM5-204ENST00000380176 KNSTRNQ9Y448 316 aa10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 EIF3AQ14152 1382 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 EIF5BO60841 1220 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 HOXD11P31277 338 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 KLHL34Q8N239 644 aa10.69□□□□□ -0.7
PDLIM5-204ENST00000380176 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
PDLIM5-204ENST00000380176 CDCA8Q53HL2 280 aa10.68□□□□□ -0.7
PDLIM5-204ENST00000380176 YEATS2Q9ULM3 1422 aa10.68□□□□□ -0.7
PDLIM5-204ENST00000380176 RBM19Q9Y4C8 960 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-204ENST00000380176 PPP2R1AP30153 589 aa10.67□□□□□ -0.7
PDLIM5-204ENST00000380176 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-204ENST00000380176 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
PDLIM5-204ENST00000380176 TMEM132EQ6IEE7 984 aa10.66□□□□□ -0.7
PDLIM5-204ENST00000380176 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
PDLIM5-204ENST00000380176 ASXL1Q8IXJ9 1541 aa10.66□□□□□ -0.7
PDLIM5-204ENST00000380176 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
PDLIM5-204ENST00000380176 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 TRAK1Q9UPV9 953 aa10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 ATF5Q9Y2D1 282 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 PIK3C2BO00750 1634 aa10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 RIMBP3CA6NJZ7 1639 aa10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 RIMBP3BA6NNM3 1639 aa10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 RIMBP3Q9UFD9 1639 aa10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
PDLIM5-204ENST00000380176 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.71
PDLIM5-204ENST00000380176 TSPOAP1O95153 1857 aa10.64□□□□□ -0.71
PDLIM5-204ENST00000380176 ADGRB1O14514 1584 aa10.64□□□□□ -0.71
PDLIM5-204ENST00000380176 CARD14Q9BXL6 1004 aa10.64□□□□□ -0.71
PDLIM5-204ENST00000380176 MYO5BQ9ULV0 1848 aa10.63□□□□□ -0.71
PDLIM5-204ENST00000380176 GLI2P10070 1586 aa10.63□□□□□ -0.71
PDLIM5-204ENST00000380176 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-204ENST00000380176 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
PDLIM5-204ENST00000380176 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-204ENST00000380176 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
PDLIM5-204ENST00000380176 IDI1Q13907 227 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms