RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 KIF3BO15066 747 aa11.12□□□□□ -0.63
CDKL5-202ENST00000379996 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
CDKL5-202ENST00000379996 NPATQ14207 1427 aa11.11□□□□□ -0.63
CDKL5-202ENST00000379996 C3P01024 1663 aa11.11□□□□□ -0.63
CDKL5-202ENST00000379996 SYNMO15061 1565 aa11.11□□□□□ -0.63
CDKL5-202ENST00000379996 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
CDKL5-202ENST00000379996 CLTCL1P53675 1640 aa11.1□□□□□ -0.63
CDKL5-202ENST00000379996 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
CDKL5-202ENST00000379996 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
CDKL5-202ENST00000379996 MADDQ8WXG6 1647 aa11.09□□□□□ -0.63
CDKL5-202ENST00000379996 BCANQ96GW7 911 aa11.09□□□□□ -0.63
CDKL5-202ENST00000379996 ERVK-7P63135 1459 aa11.09□□□□□ -0.63
CDKL5-202ENST00000379996 KIF1BO60333 1816 aa11.08□□□□□ -0.64
CDKL5-202ENST00000379996 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
CDKL5-202ENST00000379996 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
CDKL5-202ENST00000379996 POLR1AO95602 1720 aaPredicted RBP11.07□□□□□ -0.64
CDKL5-202ENST00000379996 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
CDKL5-202ENST00000379996 RIMS1Q86UR5 1692 aaKnown RBP11.06□□□□□ -0.64
CDKL5-202ENST00000379996 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
CDKL5-202ENST00000379996 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
CDKL5-202ENST00000379996 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
CDKL5-202ENST00000379996 TMEM131LA2VDJ0 1609 aa11.04□□□□□ -0.64
CDKL5-202ENST00000379996 RGL2O15211 777 aa11.04□□□□□ -0.64
CDKL5-202ENST00000379996 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
CDKL5-202ENST00000379996 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
CDKL5-202ENST00000379996 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
CDKL5-202ENST00000379996 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
CDKL5-202ENST00000379996 MYO3AQ8NEV4 1616 aa11.03□□□□□ -0.64
CDKL5-202ENST00000379996 GGT6Q6P531 493 aa11.02□□□□□ -0.64
CDKL5-202ENST00000379996 PPLO60437 1756 aa11.02□□□□□ -0.64
CDKL5-202ENST00000379996 PPP1R15AO75807 674 aaPredicted RBP11.02□□□□□ -0.65
CDKL5-202ENST00000379996 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
CDKL5-202ENST00000379996 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
CDKL5-202ENST00000379996 MYOM2P54296 1465 aa11.01□□□□□ -0.65
CDKL5-202ENST00000379996 NRXN1Q9ULB1 1477 aa11□□□□□ -0.65
CDKL5-202ENST00000379996 UHRF1BP1Q6BDS2 1440 aa11□□□□□ -0.65
CDKL5-202ENST00000379996 STAC3Q96MF2 364 aa11□□□□□ -0.65
CDKL5-202ENST00000379996 YTHDC1Q96MU7 727 aaKnown RBP11□□□□□ -0.65
CDKL5-202ENST00000379996 SIN3AQ96ST3 1273 aa11□□□□□ -0.65
CDKL5-202ENST00000379996 LAMC1P11047 1609 aa10.99□□□□□ -0.65
CDKL5-202ENST00000379996 SLC52A1Q9NWF4 448 aa10.99□□□□□ -0.65
CDKL5-202ENST00000379996 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
CDKL5-202ENST00000379996 ZFYVE9O95405 1425 aa10.98□□□□□ -0.65
CDKL5-202ENST00000379996 UGGT1Q9NYU2 1555 aa10.98□□□□□ -0.65
CDKL5-202ENST00000379996 NEXMIFQ5QGS0 1516 aa10.98□□□□□ -0.65
CDKL5-202ENST00000379996 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
CDKL5-202ENST00000379996 PTPRMP28827 1452 aa10.97□□□□□ -0.65
CDKL5-202ENST00000379996 MYO5BQ9ULV0 1848 aa10.97□□□□□ -0.65
CDKL5-202ENST00000379996 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
CDKL5-202ENST00000379996 ARID4BQ4LE39 1312 aaPredicted RBP10.97□□□□□ -0.65
CDKL5-202ENST00000379996 SLIT1O75093 1534 aa10.96□□□□□ -0.65
CDKL5-202ENST00000379996 A2ML1A8K2U0 1454 aa10.96□□□□□ -0.66
CDKL5-202ENST00000379996 TNRQ92752 1358 aa10.96□□□□□ -0.66
CDKL5-202ENST00000379996 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
CDKL5-202ENST00000379996 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
CDKL5-202ENST00000379996 TRPM1Q7Z4N2 1603 aa10.95□□□□□ -0.66
CDKL5-202ENST00000379996 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
CDKL5-202ENST00000379996 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
CDKL5-202ENST00000379996 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
CDKL5-202ENST00000379996 CFAP65Q6ZU64 1925 aaKnown RBP10.93□□□□□ -0.66
CDKL5-202ENST00000379996 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
CDKL5-202ENST00000379996 SETBP1Q9Y6X0 1596 aa10.93□□□□□ -0.66
CDKL5-202ENST00000379996 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
CDKL5-202ENST00000379996 SETD1AO15047 1707 aaKnown RBP10.92□□□□□ -0.66
CDKL5-202ENST00000379996 RALGAPBQ86X10 1494 aa10.92□□□□□ -0.66
CDKL5-202ENST00000379996 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
CDKL5-202ENST00000379996 SUPT16HQ9Y5B9 1047 aaKnown RBP10.91□□□□□ -0.66
CDKL5-202ENST00000379996 MLECQ14165 292 aa10.9□□□□□ -0.66
CDKL5-202ENST00000379996 PIK3C2GO75747 1445 aa10.9□□□□□ -0.67
CDKL5-202ENST00000379996 DIP2AQ14689 1571 aa10.89□□□□□ -0.67
CDKL5-202ENST00000379996 NRXN3Q9Y4C0 1643 aa10.89□□□□□ -0.67
CDKL5-202ENST00000379996 FBXO31Q5XUX0 539 aaPredicted RBP10.89□□□□□ -0.67
CDKL5-202ENST00000379996 IDI1Q13907 227 aa10.89□□□□□ -0.67
CDKL5-202ENST00000379996 GPRASP1Q5JY77 1395 aa10.88□□□□□ -0.67
CDKL5-202ENST00000379996 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
CDKL5-202ENST00000379996 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
CDKL5-202ENST00000379996 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
CDKL5-202ENST00000379996 CCER2I3L3R5 266 aa10.86□□□□□ -0.67
CDKL5-202ENST00000379996 MED14O60244 1454 aa10.86□□□□□ -0.67
CDKL5-202ENST00000379996 TMEM2Q9UHN6 1383 aa10.86□□□□□ -0.67
CDKL5-202ENST00000379996 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
CDKL5-202ENST00000379996 ADGRB1O14514 1584 aa10.85□□□□□ -0.67
CDKL5-202ENST00000379996 RIMS2Q9UQ26 1411 aa10.85□□□□□ -0.67
CDKL5-202ENST00000379996 PROM2Q8N271 834 aa10.84□□□□□ -0.67
CDKL5-202ENST00000379996 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-202ENST00000379996 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
CDKL5-202ENST00000379996 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDKL5-202ENST00000379996 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
CDKL5-202ENST00000379996 ALKQ9UM73 1620 aa10.82□□□□□ -0.68
CDKL5-202ENST00000379996 DLC1Q96QB1 1528 aa10.82□□□□□ -0.68
CDKL5-202ENST00000379996 LMTK3Q96Q04 1460 aa10.82□□□□□ -0.68
CDKL5-202ENST00000379996 SCAF11Q99590 1463 aaKnown RBP10.82□□□□□ -0.68
CDKL5-202ENST00000379996 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
CDKL5-202ENST00000379996 ASXL1Q8IXJ9 1541 aa10.81□□□□□ -0.68
CDKL5-202ENST00000379996 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-202ENST00000379996 CEBPAP49715 358 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-202ENST00000379996 DDX10Q13206 875 aaKnown RBP10.81□□□□□ -0.68
CDKL5-202ENST00000379996 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
CDKL5-202ENST00000379996 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
CDKL5-202ENST00000379996 NBPF8Q3BBV2 869 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms