RNA–Protein interactions for RNA: ENST00000378707.7

DMD-211, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-211ENST00000378707 HSP90AB4PQ58FF6 505 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 IFT57Q9NWB7 429 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 BICD2Q8TD16 824 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 DDX49Q9Y6V7 483 aaKnown RBP8.31□□□□□ -1.08
DMD-211ENST00000378707 RALBP1Q15311 655 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 RWDD1Q9H446 243 aaPredicted RBP8.31□□□□□ -1.08
DMD-211ENST00000378707 TAF3Q5VWG9 929 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 PLCD3Q8N3E9 789 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 PDCL3Q9H2J4 239 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 CPLX1O14810 134 aa8.31□□□□□ -1.08
DMD-211ENST00000378707 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
DMD-211ENST00000378707 GBP2P32456 591 aaPredicted RBP8.3□□□□□ -1.08
DMD-211ENST00000378707 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
DMD-211ENST00000378707 ERLIN2O94905 339 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 GGT6Q6P531 493 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 SOGA3Q5TF21 947 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 KIAA0754O94854 1291 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 LEKR1Q6ZMV7 388 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 TTC16Q8NEE8 873 aa8.3□□□□□ -1.08
DMD-211ENST00000378707 ZNF526Q8TF50 670 aaPredicted RBP8.3□□□□□ -1.08
DMD-211ENST00000378707 ERICH2A1L162 156 aa8.29□□□□□ -1.08
DMD-211ENST00000378707 CCDC112Q8NEF3 446 aa8.29□□□□□ -1.08
DMD-211ENST00000378707 CCDC175P0C221 793 aa8.29□□□□□ -1.08
DMD-211ENST00000378707 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
DMD-211ENST00000378707 EVA1CP58658 441 aa8.29□□□□□ -1.08
DMD-211ENST00000378707 PMFBP1Q8TBY8 1022 aa8.29□□□□□ -1.08
DMD-211ENST00000378707 ERCC4Q92889 916 aaPredicted RBP8.29□□□□□ -1.08
DMD-211ENST00000378707 ZWINTO95229 277 aa8.28□□□□□ -1.08
DMD-211ENST00000378707 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
DMD-211ENST00000378707 TICAM2Q86XR7 235 aa8.28□□□□□ -1.08
DMD-211ENST00000378707 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
DMD-211ENST00000378707 BBXQ8WY36 941 aaPredicted RBP8.28□□□□□ -1.08
DMD-211ENST00000378707 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
DMD-211ENST00000378707 HDGFP51858 240 aaKnown RBP8.28□□□□□ -1.08
DMD-211ENST00000378707 SASS6Q6UVJ0 657 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 ATP6V1DQ9Y5K8 247 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
DMD-211ENST00000378707 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.09
DMD-211ENST00000378707 PPM1EQ8WY54 764 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 STAMBPO95630 424 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 SMC4Q9NTJ3 1288 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
DMD-211ENST00000378707 TRDNQ13061 729 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
DMD-211ENST00000378707 FAM193AP78312 1265 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
DMD-211ENST00000378707 TMEM87AQ8NBN3 555 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 DNAJC2Q99543 621 aaKnown RBP8.26□□□□□ -1.09
DMD-211ENST00000378707 DDX11L8A8MPP1 907 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 CCDC27Q2M243 656 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
DMD-211ENST00000378707 COMMD10Q9Y6G5 202 aa8.26□□□□□ -1.09
DMD-211ENST00000378707 OLFM4Q6UX06 510 aa8.25□□□□□ -1.09
DMD-211ENST00000378707 CFDP1Q9UEE9 299 aaPredicted RBP8.25□□□□□ -1.09
DMD-211ENST00000378707 EIF3JO75822 258 aaKnown RBP8.25□□□□□ -1.09
DMD-211ENST00000378707 CLUAP1Q96AJ1 413 aa8.25□□□□□ -1.09
DMD-211ENST00000378707 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
DMD-211ENST00000378707 KRT18P05783 430 aaKnown RBP8.25□□□□□ -1.09
DMD-211ENST00000378707 SSR1P43307 286 aaKnown RBP8.25□□□□□ -1.09
DMD-211ENST00000378707 CDK5RAP3Q96JB5 506 aa8.25□□□□□ -1.09
DMD-211ENST00000378707 CFAP57Q96MR6 1250 aa8.25□□□□□ -1.09
DMD-211ENST00000378707 SAFBQ15424 915 aaKnown RBP eCLIP8.24□□□□□ -1.09
DMD-211ENST00000378707 ANAPC15P60006 121 aa8.24□□□□□ -1.09
DMD-211ENST00000378707 RBM19Q9Y4C8 960 aaKnown RBP8.24□□□□□ -1.09
DMD-211ENST00000378707 CHMP4BP1P59074 171 aa8.24□□□□□ -1.09
DMD-211ENST00000378707 DIAPH3Q9NSV4 1193 aa8.24□□□□□ -1.09
DMD-211ENST00000378707 CCDC181Q5TID7 509 aa8.24□□□□□ -1.09
DMD-211ENST00000378707 SMC1AQ14683 1233 aaKnown RBP8.24□□□□□ -1.09
DMD-211ENST00000378707 LRRFIP1Q32MZ4 808 aaKnown RBP8.24□□□□□ -1.09
DMD-211ENST00000378707 ZHX3Q9H4I2 956 aa8.24□□□□□ -1.09
DMD-211ENST00000378707 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 MAGEC2Q9UBF1 373 aaPredicted RBP8.23□□□□□ -1.09
DMD-211ENST00000378707 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 TMF1P82094 1093 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 CCDC91Q7Z6B0 441 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 VPS37CA5D8V6 355 aaPredicted RBP8.23□□□□□ -1.09
DMD-211ENST00000378707 BMS1Q14692 1282 aaKnown RBP8.23□□□□□ -1.09
DMD-211ENST00000378707 HOMER2Q9NSB8 354 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 NGDNQ8NEJ9 315 aaKnown RBP8.23□□□□□ -1.09
DMD-211ENST00000378707 CFAP45Q9UL16 551 aa8.23□□□□□ -1.09
DMD-211ENST00000378707 MYCNP04198 464 aaPredicted RBP8.22□□□□□ -1.09
DMD-211ENST00000378707 BRMS1Q9HCU9 246 aa8.22□□□□□ -1.09
DMD-211ENST00000378707 ATP2B2Q01814 1243 aa8.22□□□□□ -1.09
DMD-211ENST00000378707 AMPHP49418 695 aa8.22□□□□□ -1.09
DMD-211ENST00000378707 WDR78Q5VTH9 848 aa8.22□□□□□ -1.09
DMD-211ENST00000378707 DESP17661 470 aa8.21□□□□□ -1.09
DMD-211ENST00000378707 MAP2K1Q02750 393 aaPredicted RBP8.21□□□□□ -1.09
DMD-211ENST00000378707 MPHOSPH10O00566 681 aaKnown RBP8.21□□□□□ -1.1
DMD-211ENST00000378707 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
DMD-211ENST00000378707 SMC2O95347 1197 aa8.21□□□□□ -1.1
DMD-211ENST00000378707 DEF6Q9H4E7 631 aa8.21□□□□□ -1.1
DMD-211ENST00000378707 SMARCE1Q969G3 411 aa8.2□□□□□ -1.1
DMD-211ENST00000378707 CCDC113Q9H0I3 377 aa8.2□□□□□ -1.1
DMD-211ENST00000378707 KIF3BO15066 747 aa8.2□□□□□ -1.1
DMD-211ENST00000378707 UBE4AQ14139 1066 aa8.2□□□□□ -1.1
DMD-211ENST00000378707 CCDC73Q6ZRK6 1079 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms