RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 EIF3AQ14152 1382 aaKnown RBP24.12■■□□□ 1.45
TDP2-202ENST00000378198 KIF1BO60333 1816 aa24.12■■□□□ 1.45
TDP2-202ENST00000378198 KDM5AP29375 1690 aaKnown RBP24.12■■□□□ 1.45
TDP2-202ENST00000378198 ASXL1Q8IXJ9 1541 aa24.1■■□□□ 1.45
TDP2-202ENST00000378198 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
TDP2-202ENST00000378198 NOP58Q9Y2X3 529 aaKnown RBP24.09■■□□□ 1.45
TDP2-202ENST00000378198 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.45
TDP2-202ENST00000378198 MAP3K4Q9Y6R4 1608 aa24.08■■□□□ 1.45
TDP2-202ENST00000378198 AMER1Q5JTC6 1135 aaPredicted RBP24.08■■□□□ 1.45
TDP2-202ENST00000378198 ADAMTS8Q9UP79 889 aa24.07■■□□□ 1.44
TDP2-202ENST00000378198 NPC1L1Q9UHC9 1359 aa24.07■■□□□ 1.44
TDP2-202ENST00000378198 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
TDP2-202ENST00000378198 SLC24A1O60721 1099 aa24.07■■□□□ 1.44
TDP2-202ENST00000378198 ANP32AP39687 249 aaKnown RBP24.07■■□□□ 1.44
TDP2-202ENST00000378198 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
TDP2-202ENST00000378198 MYOM2P54296 1465 aa24.07■■□□□ 1.44
TDP2-202ENST00000378198 TCERG1O14776 1098 aaKnown RBP24.06■■□□□ 1.44
TDP2-202ENST00000378198 KIF3BO15066 747 aa24.06■■□□□ 1.44
TDP2-202ENST00000378198 MYT1LQ9UL68 1186 aa24.05■■□□□ 1.44
TDP2-202ENST00000378198 PIK3C2GO75747 1445 aa24.05■■□□□ 1.44
TDP2-202ENST00000378198 WDR43Q15061 677 aaKnown RBP eCLIP24.04■■□□□ 1.44
TDP2-202ENST00000378198 ABCA6Q8N139 1617 aa24.04■■□□□ 1.44
TDP2-202ENST00000378198 IPO9Q96P70 1041 aaKnown RBP24.02■■□□□ 1.44
TDP2-202ENST00000378198 EFCAB6Q5THR3 1501 aa24.02■■□□□ 1.44
TDP2-202ENST00000378198 KIDINS220Q9ULH0 1771 aa24.01■■□□□ 1.43
TDP2-202ENST00000378198 MS4A1P11836 297 aa23.98■■□□□ 1.43
TDP2-202ENST00000378198 MYO3AQ8NEV4 1616 aa23.98■■□□□ 1.43
TDP2-202ENST00000378198 MROH2AA6NES4 1674 aa23.98■■□□□ 1.43
TDP2-202ENST00000378198 UGGT1Q9NYU2 1555 aa23.97■■□□□ 1.43
TDP2-202ENST00000378198 LMTK2Q8IWU2 1503 aa23.97■■□□□ 1.43
TDP2-202ENST00000378198 PPRC1Q5VV67 1664 aaKnown RBP23.97■■□□□ 1.43
TDP2-202ENST00000378198 PLIN1O60240 522 aa23.96■■□□□ 1.43
TDP2-202ENST00000378198 ERVK-7P63135 1459 aa23.96■■□□□ 1.43
TDP2-202ENST00000378198 PLEKHH1Q9ULM0 1364 aa23.96■■□□□ 1.43
TDP2-202ENST00000378198 ASXL2Q76L83 1435 aa23.95■■□□□ 1.43
TDP2-202ENST00000378198 ZNF521Q96K83 1311 aa23.95■■□□□ 1.42
TDP2-202ENST00000378198 CRBNQ96SW2 442 aa23.95■■□□□ 1.42
TDP2-202ENST00000378198 PAK3O75914 559 aaPredicted RBP23.94■■□□□ 1.42
TDP2-202ENST00000378198 CFAP70Q5T0N1 1121 aa23.94■■□□□ 1.42
TDP2-202ENST00000378198 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
TDP2-202ENST00000378198 GOLGA2Q08379 1002 aa23.93■■□□□ 1.42
TDP2-202ENST00000378198 DUSP27Q5VZP5 1158 aa23.93■■□□□ 1.42
TDP2-202ENST00000378198 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
TDP2-202ENST00000378198 ZBTB47Q9UFB7 747 aaPredicted RBP23.92■■□□□ 1.42
TDP2-202ENST00000378198 ZNF518AQ6AHZ1 1483 aa23.91■■□□□ 1.42
TDP2-202ENST00000378198 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
TDP2-202ENST00000378198 PDE4AP27815 886 aa23.91■■□□□ 1.42
TDP2-202ENST00000378198 SBNO2Q9Y2G9 1366 aa23.9■■□□□ 1.42
TDP2-202ENST00000378198 BACH2Q9BYV9 841 aa23.89■■□□□ 1.41
TDP2-202ENST00000378198 ADGRB3O60242 1522 aa23.89■■□□□ 1.41
TDP2-202ENST00000378198 CFAP74Q9C0B2 1584 aa23.89■■□□□ 1.41
TDP2-202ENST00000378198 PPLO60437 1756 aa23.87■■□□□ 1.41
TDP2-202ENST00000378198 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.87■■□□□ 1.41
TDP2-202ENST00000378198 SLFN5Q08AF3 891 aa23.86■■□□□ 1.41
TDP2-202ENST00000378198 ZC3H13Q5T200 1668 aaKnown RBP23.85■■□□□ 1.41
TDP2-202ENST00000378198 TRMT2AQ8IZ69 625 aaKnown RBP23.83■■□□□ 1.41
TDP2-202ENST00000378198 NGEFQ8N5V2 710 aa23.83■■□□□ 1.41
TDP2-202ENST00000378198 C20orf194Q5TEA3 1177 aa23.83■■□□□ 1.41
TDP2-202ENST00000378198 NOS1P29475 1434 aa23.82■■□□□ 1.4
TDP2-202ENST00000378198 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
TDP2-202ENST00000378198 CFAP65Q6ZU64 1925 aaKnown RBP23.8■■□□□ 1.4
TDP2-202ENST00000378198 QRICH2Q9H0J4 1663 aa23.8■■□□□ 1.4
TDP2-202ENST00000378198 KDM2BQ8NHM5 1336 aa23.8■■□□□ 1.4
TDP2-202ENST00000378198 CENPJQ9HC77 1338 aaPredicted RBP23.8■■□□□ 1.4
TDP2-202ENST00000378198 CCDC146Q8IYE0 955 aa23.8■■□□□ 1.4
TDP2-202ENST00000378198 MLH3Q9UHC1 1453 aa23.79■■□□□ 1.4
TDP2-202ENST00000378198 CENPQQ7L2Z9 268 aaPredicted RBP23.79■■□□□ 1.4
TDP2-202ENST00000378198 NKTRP30414 1462 aaKnown RBP23.78■■□□□ 1.4
TDP2-202ENST00000378198 HECW2Q9P2P5 1572 aa23.78■■□□□ 1.4
TDP2-202ENST00000378198 APAF1O14727 1248 aa23.78■■□□□ 1.4
TDP2-202ENST00000378198 POLR3AO14802 1390 aaPredicted RBP23.78■■□□□ 1.4
TDP2-202ENST00000378198 NPM2Q86SE8 214 aaKnown RBP23.77■■□□□ 1.4
TDP2-202ENST00000378198 POGZQ7Z3K3 1410 aa23.77■■□□□ 1.4
TDP2-202ENST00000378198 FRMPD1Q5SYB0 1578 aa23.77■■□□□ 1.4
TDP2-202ENST00000378198 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
TDP2-202ENST00000378198 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
TDP2-202ENST00000378198 NPATQ14207 1427 aa23.77■■□□□ 1.4
TDP2-202ENST00000378198 NBR1Q14596 966 aa23.75■■□□□ 1.39
TDP2-202ENST00000378198 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
TDP2-202ENST00000378198 RPGRIP1LQ68CZ1 1315 aa23.75■■□□□ 1.39
TDP2-202ENST00000378198 E9PSI1 815 aa23.75■■□□□ 1.39
TDP2-202ENST00000378198 CHGAP10645 457 aaKnown RBP23.74■■□□□ 1.39
TDP2-202ENST00000378198 ADGRB1O14514 1584 aa23.74■■□□□ 1.39
TDP2-202ENST00000378198 CD109Q6YHK3 1445 aa23.74■■□□□ 1.39
TDP2-202ENST00000378198 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
TDP2-202ENST00000378198 SHPRHQ149N8 1683 aa23.73■■□□□ 1.39
TDP2-202ENST00000378198 DEKP35659 375 aaKnown RBP23.71■■□□□ 1.39
TDP2-202ENST00000378198 CAMSAP1Q5T5Y3 1602 aa23.71■■□□□ 1.39
TDP2-202ENST00000378198 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
TDP2-202ENST00000378198 SPINK5Q9NQ38 1064 aaPredicted RBP23.7■■□□□ 1.38
TDP2-202ENST00000378198 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
TDP2-202ENST00000378198 ABCC3O15438 1527 aa23.7■■□□□ 1.38
TDP2-202ENST00000378198 GGT6Q6P531 493 aa23.69■■□□□ 1.38
TDP2-202ENST00000378198 RTL5Q5HYW3 569 aaPredicted RBP23.67■■□□□ 1.38
TDP2-202ENST00000378198 MORC1Q86VD1 984 aa23.67■■□□□ 1.38
TDP2-202ENST00000378198 DDRGK1Q96HY6 314 aa23.67■■□□□ 1.38
TDP2-202ENST00000378198 PIK3C2BO00750 1634 aa23.67■■□□□ 1.38
TDP2-202ENST00000378198 SKAP1Q86WV1 359 aa23.66■■□□□ 1.38
TDP2-202ENST00000378198 SIGLEC1Q9BZZ2 1709 aa23.66■■□□□ 1.38
TDP2-202ENST00000378198 GLI2P10070 1586 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms