RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 RUSC2Q8N2Y8 1516 aa14.78□□□□□ -0.04
PCDHA9-201ENST00000378122 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
PCDHA9-201ENST00000378122 TERF2IPQ9NYB0 399 aa14.78□□□□□ -0.04
PCDHA9-201ENST00000378122 SKOR2Q2VWA4 1001 aaPredicted RBP14.78□□□□□ -0.04
PCDHA9-201ENST00000378122 COG6Q9Y2V7 657 aa14.77□□□□□ -0.04
PCDHA9-201ENST00000378122 TRAK1Q9UPV9 953 aa14.77□□□□□ -0.05
PCDHA9-201ENST00000378122 MTMR7Q9Y216 660 aa14.76□□□□□ -0.05
PCDHA9-201ENST00000378122 PES1O00541 588 aaKnown RBP14.75□□□□□ -0.05
PCDHA9-201ENST00000378122 VPS37DQ86XT2 251 aa14.75□□□□□ -0.05
PCDHA9-201ENST00000378122 USP47Q96K76 1375 aa14.75□□□□□ -0.05
PCDHA9-201ENST00000378122 E9PSI1 815 aa14.75□□□□□ -0.05
PCDHA9-201ENST00000378122 TTC5Q8N0Z6 440 aa14.74□□□□□ -0.05
PCDHA9-201ENST00000378122 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-201ENST00000378122 ELL2O00472 640 aaPredicted RBP14.74□□□□□ -0.05
PCDHA9-201ENST00000378122 LMOD3Q0VAK6 560 aa14.74□□□□□ -0.05
PCDHA9-201ENST00000378122 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
PCDHA9-201ENST00000378122 NOL10Q9BSC4 688 aaKnown RBP14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 A0A0U1RQG5 324 aaPredicted RBP14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 KDM4AO75164 1064 aa14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 H3BQV1 296 aa14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 IFFO2Q5TF58 517 aa14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 JPH4Q96JJ6 628 aa14.73□□□□□ -0.05
PCDHA9-201ENST00000378122 PROSER2Q86WR7 435 aaPredicted RBP14.72□□□□□ -0.05
PCDHA9-201ENST00000378122 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
PCDHA9-201ENST00000378122 CCDC144AA2RUR9 1427 aa14.72□□□□□ -0.05
PCDHA9-201ENST00000378122 GRM1Q13255 1194 aa14.71□□□□□ -0.05
PCDHA9-201ENST00000378122 FAM13BQ9NYF5 915 aa14.71□□□□□ -0.05
PCDHA9-201ENST00000378122 FYB1O15117 783 aa14.71□□□□□ -0.06
PCDHA9-201ENST00000378122 SF3A1Q15459 793 aaKnown RBP14.71□□□□□ -0.06
PCDHA9-201ENST00000378122 ZNF592Q92610 1267 aa14.69□□□□□ -0.06
PCDHA9-201ENST00000378122 MINK1Q8N4C8 1332 aaPredicted RBP14.68□□□□□ -0.06
PCDHA9-201ENST00000378122 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-201ENST00000378122 APAF1O14727 1248 aa14.68□□□□□ -0.06
PCDHA9-201ENST00000378122 GOLGA6L19H0YKK7 550 aa14.68□□□□□ -0.06
PCDHA9-201ENST00000378122 CCDC34Q96HJ3 373 aa14.68□□□□□ -0.06
PCDHA9-201ENST00000378122 DHX16O60231 1041 aaKnown RBP14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 FAM184AQ8NB25 1140 aa14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 TPM3P06753 285 aa14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 NLRP2Q9NX02 1062 aa14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 ESCO1Q5FWF5 840 aa14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 CCAR2Q8N163 923 aaKnown RBP14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
PCDHA9-201ENST00000378122 NFKBIBQ15653 356 aa14.66□□□□□ -0.06
PCDHA9-201ENST00000378122 SETQ01105 290 aaPredicted RBP14.66□□□□□ -0.06
PCDHA9-201ENST00000378122 HDAC5Q9UQL6 1122 aa14.65□□□□□ -0.06
PCDHA9-201ENST00000378122 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.65□□□□□ -0.06
PCDHA9-201ENST00000378122 TPD52L1Q16890 204 aaPredicted RBP14.65□□□□□ -0.06
PCDHA9-201ENST00000378122 CHMP5Q9NZZ3 219 aa14.65□□□□□ -0.06
PCDHA9-201ENST00000378122 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
PCDHA9-201ENST00000378122 MCTP1Q6DN14 999 aa14.64□□□□□ -0.07
PCDHA9-201ENST00000378122 CHMP4AQ9BY43 222 aa14.64□□□□□ -0.07
PCDHA9-201ENST00000378122 PATL2C9JE40 543 aaKnown RBP14.64□□□□□ -0.07
PCDHA9-201ENST00000378122 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
PCDHA9-201ENST00000378122 ANO2Q9NQ90 1003 aa14.64□□□□□ -0.07
PCDHA9-201ENST00000378122 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
PCDHA9-201ENST00000378122 BECN2A8MW95 431 aa14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 KIF3AQ9Y496 699 aa14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 DDX19BQ9UMR2 479 aa14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 ATP6V1DQ9Y5K8 247 aa14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 ADAMTS2O95450 1211 aa14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 TEFQ10587 303 aa14.63□□□□□ -0.07
PCDHA9-201ENST00000378122 FOSBP53539 338 aa14.62□□□□□ -0.07
PCDHA9-201ENST00000378122 AMOTL1Q8IY63 956 aa14.62□□□□□ -0.07
PCDHA9-201ENST00000378122 CCDC7Q96M83 1385 aa14.62□□□□□ -0.07
PCDHA9-201ENST00000378122 DZIP1LQ8IYY4 767 aaKnown RBP14.62□□□□□ -0.07
PCDHA9-201ENST00000378122 DIAPH3Q9NSV4 1193 aa14.61□□□□□ -0.07
PCDHA9-201ENST00000378122 UACAQ9BZF9 1416 aa14.61□□□□□ -0.07
PCDHA9-201ENST00000378122 COG3Q96JB2 828 aa14.6□□□□□ -0.07
PCDHA9-201ENST00000378122 KIF7Q2M1P5 1343 aa14.6□□□□□ -0.07
PCDHA9-201ENST00000378122 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 CEP89Q96ST8 783 aa14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 BRPF3Q9ULD4 1205 aa14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 RIPK4P57078 832 aa14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 C22orf23Q9BZE7 217 aa14.59□□□□□ -0.07
PCDHA9-201ENST00000378122 REC8O95072 547 aa14.58□□□□□ -0.07
PCDHA9-201ENST00000378122 PANK1Q8TE04 598 aa14.58□□□□□ -0.07
PCDHA9-201ENST00000378122 R3HCC1Q9Y3T6 440 aaKnown RBP14.58□□□□□ -0.07
PCDHA9-201ENST00000378122 RSPH4AQ5TD94 716 aa14.58□□□□□ -0.08
PCDHA9-201ENST00000378122 CHMP4CQ96CF2 233 aa14.58□□□□□ -0.08
PCDHA9-201ENST00000378122 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
PCDHA9-201ENST00000378122 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
PCDHA9-201ENST00000378122 IL27Q8NEV9 243 aa14.57□□□□□ -0.08
PCDHA9-201ENST00000378122 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
PCDHA9-201ENST00000378122 GPS2Q13227 327 aa14.57□□□□□ -0.08
PCDHA9-201ENST00000378122 IKQ13123 557 aaPredicted RBP14.57□□□□□ -0.08
PCDHA9-201ENST00000378122 APPP05067 770 aa14.57□□□□□ -0.08
PCDHA9-201ENST00000378122 STK11IPQ8N1F8 1099 aa14.57□□□□□ -0.08
PCDHA9-201ENST00000378122 CHMP4BP1P59074 171 aa14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 TSR1Q2NL82 804 aaKnown RBP14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 CCDC27Q2M243 656 aa14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 RUNDC1Q96C34 613 aa14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 LNPKQ9C0E8 428 aa14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 TEX35Q5T0J7 233 aa14.56□□□□□ -0.08
PCDHA9-201ENST00000378122 RBM5P52756 815 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHA9-201ENST00000378122 BICD2Q8TD16 824 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms