RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 NINLQ9Y2I6 1382 aa12.72□□□□□ -0.37
RNF38-206ENST00000377885 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
RNF38-206ENST00000377885 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
RNF38-206ENST00000377885 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.37
RNF38-206ENST00000377885 GZF1Q9H116 711 aaPredicted RBP12.71□□□□□ -0.37
RNF38-206ENST00000377885 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
RNF38-206ENST00000377885 BCAR3O75815 825 aa12.7□□□□□ -0.38
RNF38-206ENST00000377885 PLB1Q6P1J6 1458 aa12.7□□□□□ -0.38
RNF38-206ENST00000377885 COL17A1Q9UMD9 1497 aaPredicted RBP12.69□□□□□ -0.38
RNF38-206ENST00000377885 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
RNF38-206ENST00000377885 PBRM1Q86U86 1689 aa12.69□□□□□ -0.38
RNF38-206ENST00000377885 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
RNF38-206ENST00000377885 POGKQ9P215 609 aa12.68□□□□□ -0.38
RNF38-206ENST00000377885 GOLGA6L22H0YM25 854 aa12.68□□□□□ -0.38
RNF38-206ENST00000377885 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
RNF38-206ENST00000377885 PANK1Q8TE04 598 aa12.68□□□□□ -0.38
RNF38-206ENST00000377885 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
RNF38-206ENST00000377885 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
RNF38-206ENST00000377885 TESK2Q96S53 571 aa12.67□□□□□ -0.38
RNF38-206ENST00000377885 CHMP5Q9NZZ3 219 aa12.67□□□□□ -0.38
RNF38-206ENST00000377885 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
RNF38-206ENST00000377885 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
RNF38-206ENST00000377885 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
RNF38-206ENST00000377885 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
RNF38-206ENST00000377885 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
RNF38-206ENST00000377885 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
RNF38-206ENST00000377885 PTMSP20962 102 aa12.66□□□□□ -0.38
RNF38-206ENST00000377885 TNNT2P45379 298 aaPredicted RBP12.66□□□□□ -0.38
RNF38-206ENST00000377885 GBP4Q96PP9 640 aa12.65□□□□□ -0.38
RNF38-206ENST00000377885 FAM135AQ9P2D6 1515 aa12.65□□□□□ -0.39
RNF38-206ENST00000377885 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
RNF38-206ENST00000377885 NUP160Q12769 1436 aa12.64□□□□□ -0.39
RNF38-206ENST00000377885 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
RNF38-206ENST00000377885 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNF38-206ENST00000377885 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
RNF38-206ENST00000377885 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
RNF38-206ENST00000377885 MRE11P49959 708 aa12.63□□□□□ -0.39
RNF38-206ENST00000377885 KANK1Q14678 1352 aa12.63□□□□□ -0.39
RNF38-206ENST00000377885 IGHDP01880 384 aa12.62□□□□□ -0.39
RNF38-206ENST00000377885 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
RNF38-206ENST00000377885 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
RNF38-206ENST00000377885 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
RNF38-206ENST00000377885 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
RNF38-206ENST00000377885 C22orf23Q9BZE7 217 aa12.61□□□□□ -0.39
RNF38-206ENST00000377885 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
RNF38-206ENST00000377885 PTPRGP23470 1445 aa12.61□□□□□ -0.39
RNF38-206ENST00000377885 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
RNF38-206ENST00000377885 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
RNF38-206ENST00000377885 TRAK2O60296 914 aa12.6□□□□□ -0.39
RNF38-206ENST00000377885 MCM4P33991 863 aa12.6□□□□□ -0.39
RNF38-206ENST00000377885 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
RNF38-206ENST00000377885 KDM5DQ9BY66 1539 aa12.6□□□□□ -0.39
RNF38-206ENST00000377885 EFCAB2Q5VUJ9 269 aa12.59□□□□□ -0.39
RNF38-206ENST00000377885 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
RNF38-206ENST00000377885 PIK3C2GO75747 1445 aa12.59□□□□□ -0.39
RNF38-206ENST00000377885 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
RNF38-206ENST00000377885 A2MP01023 1474 aa12.59□□□□□ -0.39
RNF38-206ENST00000377885 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
RNF38-206ENST00000377885 SKOR2Q2VWA4 1001 aaPredicted RBP12.59□□□□□ -0.39
RNF38-206ENST00000377885 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
RNF38-206ENST00000377885 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
RNF38-206ENST00000377885 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
RNF38-206ENST00000377885 WWC1Q8IX03 1113 aa12.58□□□□□ -0.4
RNF38-206ENST00000377885 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
RNF38-206ENST00000377885 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
RNF38-206ENST00000377885 CROCC2H7BZ55 1655 aa12.57□□□□□ -0.4
RNF38-206ENST00000377885 IPO8O15397 1037 aaKnown RBP12.57□□□□□ -0.4
RNF38-206ENST00000377885 U2AF1L5P0DN76 240 aaPredicted RBP12.57□□□□□ -0.4
RNF38-206ENST00000377885 U2AF1Q01081 240 aaKnown RBP eCLIP12.57□□□□□ -0.4
RNF38-206ENST00000377885 DZIP1LQ8IYY4 767 aaKnown RBP12.57□□□□□ -0.4
RNF38-206ENST00000377885 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
RNF38-206ENST00000377885 SCAF11Q99590 1463 aaKnown RBP12.56□□□□□ -0.4
RNF38-206ENST00000377885 MSNP26038 577 aaKnown RBP12.56□□□□□ -0.4
RNF38-206ENST00000377885 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
RNF38-206ENST00000377885 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
RNF38-206ENST00000377885 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
RNF38-206ENST00000377885 E9PCH4 1651 aa12.55□□□□□ -0.4
RNF38-206ENST00000377885 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
RNF38-206ENST00000377885 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
RNF38-206ENST00000377885 ATP10BO94823 1461 aa12.54□□□□□ -0.4
RNF38-206ENST00000377885 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
RNF38-206ENST00000377885 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
RNF38-206ENST00000377885 SEC24BO95487 1268 aa12.54□□□□□ -0.4
RNF38-206ENST00000377885 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
RNF38-206ENST00000377885 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
RNF38-206ENST00000377885 PRDM15P57071 1507 aaPredicted RBP12.54□□□□□ -0.4
RNF38-206ENST00000377885 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
RNF38-206ENST00000377885 ADCY10Q96PN6 1610 aa12.54□□□□□ -0.4
RNF38-206ENST00000377885 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
RNF38-206ENST00000377885 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
RNF38-206ENST00000377885 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
RNF38-206ENST00000377885 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.4
RNF38-206ENST00000377885 MVPQ14764 893 aaKnown RBP12.52□□□□□ -0.4
RNF38-206ENST00000377885 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.4
RNF38-206ENST00000377885 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.41
RNF38-206ENST00000377885 CLCN1P35523 988 aa12.52□□□□□ -0.41
RNF38-206ENST00000377885 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
RNF38-206ENST00000377885 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
RNF38-206ENST00000377885 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
RNF38-206ENST00000377885 CT47B1P0C2W7 299 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms