RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 GRPEL1Q9HAV7 217 aa20.33■□□□□ 0.85
ATXN2-201ENST00000377617 TSPYL1Q9H0U9 437 aa20.32■□□□□ 0.84
ATXN2-201ENST00000377617 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
ATXN2-201ENST00000377617 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
ATXN2-201ENST00000377617 CCP110O43303 1012 aa20.32■□□□□ 0.84
ATXN2-201ENST00000377617 UQCRHP07919 91 aa20.32■□□□□ 0.84
ATXN2-201ENST00000377617 NPHP1O15259 732 aa20.32■□□□□ 0.84
ATXN2-201ENST00000377617 CAVIN1Q6NZI2 390 aaKnown RBP20.32■□□□□ 0.84
ATXN2-201ENST00000377617 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
ATXN2-201ENST00000377617 SOGA1O94964 1423 aa20.31■□□□□ 0.84
ATXN2-201ENST00000377617 CCDC73Q6ZRK6 1079 aa20.31■□□□□ 0.84
ATXN2-201ENST00000377617 NAT10Q9H0A0 1025 aaKnown RBP20.31■□□□□ 0.84
ATXN2-201ENST00000377617 PDCL3Q9H2J4 239 aa20.31■□□□□ 0.84
ATXN2-201ENST00000377617 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
ATXN2-201ENST00000377617 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
ATXN2-201ENST00000377617 BACH2Q9BYV9 841 aa20.29■□□□□ 0.84
ATXN2-201ENST00000377617 TSPY26PQ9H489 355 aa20.29■□□□□ 0.84
ATXN2-201ENST00000377617 DEF6Q9H4E7 631 aa20.29■□□□□ 0.84
ATXN2-201ENST00000377617 DZIP1LQ8IYY4 767 aaKnown RBP20.29■□□□□ 0.84
ATXN2-201ENST00000377617 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
ATXN2-201ENST00000377617 PDE4CQ08493 712 aa20.28■□□□□ 0.84
ATXN2-201ENST00000377617 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
ATXN2-201ENST00000377617 CCDC112Q8NEF3 446 aa20.28■□□□□ 0.84
ATXN2-201ENST00000377617 TRIM5Q9C035 493 aa20.28■□□□□ 0.84
ATXN2-201ENST00000377617 VPS37CA5D8V6 355 aaPredicted RBP20.27■□□□□ 0.84
ATXN2-201ENST00000377617 ZSCAN30Q86W11 494 aa20.27■□□□□ 0.84
ATXN2-201ENST00000377617 NUP155O75694 1391 aa20.27■□□□□ 0.83
ATXN2-201ENST00000377617 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
ATXN2-201ENST00000377617 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
ATXN2-201ENST00000377617 HDGFP51858 240 aaKnown RBP20.24■□□□□ 0.83
ATXN2-201ENST00000377617 CCDC47Q96A33 483 aaKnown RBP20.24■□□□□ 0.83
ATXN2-201ENST00000377617 ANO2Q9NQ90 1003 aa20.24■□□□□ 0.83
ATXN2-201ENST00000377617 SOX12O15370 315 aa20.24■□□□□ 0.83
ATXN2-201ENST00000377617 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
ATXN2-201ENST00000377617 MCM2P49736 904 aa20.23■□□□□ 0.83
ATXN2-201ENST00000377617 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
ATXN2-201ENST00000377617 PANK3Q9H999 370 aa20.23■□□□□ 0.83
ATXN2-201ENST00000377617 APAF1O14727 1248 aa20.22■□□□□ 0.83
ATXN2-201ENST00000377617 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
ATXN2-201ENST00000377617 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
ATXN2-201ENST00000377617 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
ATXN2-201ENST00000377617 HSP90AB3PQ58FF7 597 aa20.22■□□□□ 0.83
ATXN2-201ENST00000377617 PCMTD1Q96MG8 357 aaPredicted RBP20.21■□□□□ 0.83
ATXN2-201ENST00000377617 CDC45O75419 566 aa20.21■□□□□ 0.83
ATXN2-201ENST00000377617 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
ATXN2-201ENST00000377617 TRIM29Q14134 588 aa20.21■□□□□ 0.83
ATXN2-201ENST00000377617 RRP7AQ9Y3A4 280 aaKnown RBP20.21■□□□□ 0.83
ATXN2-201ENST00000377617 LRRFIP1Q32MZ4 808 aaKnown RBP20.2■□□□□ 0.82
ATXN2-201ENST00000377617 ZMYND15Q9H091 742 aa20.2■□□□□ 0.82
ATXN2-201ENST00000377617 ANKRD30AQ9BXX3 1397 aa20.2■□□□□ 0.82
ATXN2-201ENST00000377617 KIAA0754O94854 1291 aa20.2■□□□□ 0.82
ATXN2-201ENST00000377617 CIZ1Q9ULV3 898 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-201ENST00000377617 MCM4P33991 863 aa20.2■□□□□ 0.82
ATXN2-201ENST00000377617 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-201ENST00000377617 EIF3JO75822 258 aaKnown RBP20.19■□□□□ 0.82
ATXN2-201ENST00000377617 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
ATXN2-201ENST00000377617 PRPF40AO75400 957 aaKnown RBP20.19■□□□□ 0.82
ATXN2-201ENST00000377617 TOMM22Q9NS69 142 aa20.19■□□□□ 0.82
ATXN2-201ENST00000377617 SYNE3Q6ZMZ3 975 aa20.18■□□□□ 0.82
ATXN2-201ENST00000377617 ROCK1Q13464 1354 aa20.18■□□□□ 0.82
ATXN2-201ENST00000377617 CPLX1O14810 134 aa20.18■□□□□ 0.82
ATXN2-201ENST00000377617 RABEP1Q15276 862 aa20.18■□□□□ 0.82
ATXN2-201ENST00000377617 SDF4Q9BRK5 362 aa20.18■□□□□ 0.82
ATXN2-201ENST00000377617 LNPKQ9C0E8 428 aa20.18■□□□□ 0.82
ATXN2-201ENST00000377617 CWC22Q9HCG8 908 aaKnown RBP20.18■□□□□ 0.82
ATXN2-201ENST00000377617 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
ATXN2-201ENST00000377617 CALCOCO1Q9P1Z2 691 aa20.17■□□□□ 0.82
ATXN2-201ENST00000377617 MARCH6O60337 910 aa20.17■□□□□ 0.82
ATXN2-201ENST00000377617 ERLIN1O75477 346 aa20.17■□□□□ 0.82
ATXN2-201ENST00000377617 CT47B1P0C2W7 299 aaPredicted RBP20.15■□□□□ 0.82
ATXN2-201ENST00000377617 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
ATXN2-201ENST00000377617 GOLGA6L7A0A1B0GV03 622 aa20.14■□□□□ 0.81
ATXN2-201ENST00000377617 PDCP20941 246 aa20.14■□□□□ 0.81
ATXN2-201ENST00000377617 USP47Q96K76 1375 aa20.13■□□□□ 0.81
ATXN2-201ENST00000377617 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
ATXN2-201ENST00000377617 CAGE1Q8TC20 777 aa20.13■□□□□ 0.81
ATXN2-201ENST00000377617 CCDC192P0DO97 292 aa20.12■□□□□ 0.81
ATXN2-201ENST00000377617 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
ATXN2-201ENST00000377617 MYO6Q9UM54 1294 aa20.12■□□□□ 0.81
ATXN2-201ENST00000377617 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
ATXN2-201ENST00000377617 STK26Q9P289 416 aa20.11■□□□□ 0.81
ATXN2-201ENST00000377617 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
ATXN2-201ENST00000377617 KINO60870 393 aaKnown RBP20.11■□□□□ 0.81
ATXN2-201ENST00000377617 PDILTQ8N807 584 aa20.1■□□□□ 0.81
ATXN2-201ENST00000377617 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
ATXN2-201ENST00000377617 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
ATXN2-201ENST00000377617 CCDC7Q96M83 1385 aa20.09■□□□□ 0.81
ATXN2-201ENST00000377617 MSH5O43196 834 aa20.09■□□□□ 0.81
ATXN2-201ENST00000377617 NAP1L1P55209 391 aaKnown RBP20.09■□□□□ 0.81
ATXN2-201ENST00000377617 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.81
ATXN2-201ENST00000377617 SPC24Q8NBT2 197 aa20.07■□□□□ 0.8
ATXN2-201ENST00000377617 SMARCE1Q969G3 411 aa20.07■□□□□ 0.8
ATXN2-201ENST00000377617 KIF2AO00139 706 aaPredicted RBP20.07■□□□□ 0.8
ATXN2-201ENST00000377617 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
ATXN2-201ENST00000377617 PRM3Q9NNZ6 103 aa20.07■□□□□ 0.8
ATXN2-201ENST00000377617 ERICH4A6NGS2 130 aa20.07■□□□□ 0.8
ATXN2-201ENST00000377617 SMC2O95347 1197 aa20.07■□□□□ 0.8
ATXN2-201ENST00000377617 HSP90AB4PQ58FF6 505 aa20.06■□□□□ 0.8
ATXN2-201ENST00000377617 SAFBQ15424 915 aaKnown RBP eCLIP20.06■□□□□ 0.8
ATXN2-201ENST00000377617 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms