RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 KIF3BO15066 747 aa15.66■□□□□ 0.1
TNFRSF9-201ENST00000377507 SLC24A1O60721 1099 aa15.65■□□□□ 0.1
TNFRSF9-201ENST00000377507 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
TNFRSF9-201ENST00000377507 EIF3AQ14152 1382 aaKnown RBP15.65■□□□□ 0.1
TNFRSF9-201ENST00000377507 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.09
TNFRSF9-201ENST00000377507 LMTK2Q8IWU2 1503 aa15.64■□□□□ 0.09
TNFRSF9-201ENST00000377507 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
TNFRSF9-201ENST00000377507 CDCA7LQ96GN5 454 aa15.64■□□□□ 0.09
TNFRSF9-201ENST00000377507 EFCAB6Q5THR3 1501 aa15.63■□□□□ 0.09
TNFRSF9-201ENST00000377507 MAP3K4Q9Y6R4 1608 aa15.63■□□□□ 0.09
TNFRSF9-201ENST00000377507 ASXL1Q8IXJ9 1541 aa15.63■□□□□ 0.09
TNFRSF9-201ENST00000377507 NRXN1Q9ULB1 1477 aa15.62■□□□□ 0.09
TNFRSF9-201ENST00000377507 MYOM1P52179 1685 aa15.62■□□□□ 0.09
TNFRSF9-201ENST00000377507 PIK3C2GO75747 1445 aa15.62■□□□□ 0.09
TNFRSF9-201ENST00000377507 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
TNFRSF9-201ENST00000377507 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF9-201ENST00000377507 EXOC6Q8TAG9 804 aa15.61■□□□□ 0.09
TNFRSF9-201ENST00000377507 ADAMTS8Q9UP79 889 aa15.61■□□□□ 0.09
TNFRSF9-201ENST00000377507 IFT172Q9UG01 1749 aa15.6■□□□□ 0.09
TNFRSF9-201ENST00000377507 ZNF518AQ6AHZ1 1483 aa15.6■□□□□ 0.09
TNFRSF9-201ENST00000377507 ABCA6Q8N139 1617 aa15.59■□□□□ 0.09
TNFRSF9-201ENST00000377507 UGGT1Q9NYU2 1555 aa15.59■□□□□ 0.09
TNFRSF9-201ENST00000377507 KDM5AP29375 1690 aaKnown RBP15.58■□□□□ 0.09
TNFRSF9-201ENST00000377507 PPRC1Q5VV67 1664 aaKnown RBP15.58■□□□□ 0.09
TNFRSF9-201ENST00000377507 ZNF521Q96K83 1311 aa15.58■□□□□ 0.09
TNFRSF9-201ENST00000377507 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
TNFRSF9-201ENST00000377507 KIF1BO60333 1816 aa15.58■□□□□ 0.08
TNFRSF9-201ENST00000377507 ERVK-7P63135 1459 aa15.58■□□□□ 0.08
TNFRSF9-201ENST00000377507 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
TNFRSF9-201ENST00000377507 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
TNFRSF9-201ENST00000377507 MYO3AQ8NEV4 1616 aa15.56■□□□□ 0.08
TNFRSF9-201ENST00000377507 ADGRB3O60242 1522 aa15.56■□□□□ 0.08
TNFRSF9-201ENST00000377507 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
TNFRSF9-201ENST00000377507 SETBP1Q9Y6X0 1596 aa15.55■□□□□ 0.08
TNFRSF9-201ENST00000377507 MYT1LQ9UL68 1186 aa15.55■□□□□ 0.08
TNFRSF9-201ENST00000377507 PLEKHH1Q9ULM0 1364 aa15.54■□□□□ 0.08
TNFRSF9-201ENST00000377507 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
TNFRSF9-201ENST00000377507 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
TNFRSF9-201ENST00000377507 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
TNFRSF9-201ENST00000377507 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
TNFRSF9-201ENST00000377507 POGZQ7Z3K3 1410 aa15.53■□□□□ 0.08
TNFRSF9-201ENST00000377507 DUSP27Q5VZP5 1158 aa15.53■□□□□ 0.08
TNFRSF9-201ENST00000377507 FRMPD1Q5SYB0 1578 aa15.52■□□□□ 0.08
TNFRSF9-201ENST00000377507 CFAP74Q9C0B2 1584 aa15.52■□□□□ 0.08
TNFRSF9-201ENST00000377507 NPATQ14207 1427 aa15.51■□□□□ 0.07
TNFRSF9-201ENST00000377507 MS4A1P11836 297 aa15.51■□□□□ 0.07
TNFRSF9-201ENST00000377507 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
TNFRSF9-201ENST00000377507 CARD14Q9BXL6 1004 aa15.51■□□□□ 0.07
TNFRSF9-201ENST00000377507 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
TNFRSF9-201ENST00000377507 PLIN1O60240 522 aa15.49■□□□□ 0.07
TNFRSF9-201ENST00000377507 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
TNFRSF9-201ENST00000377507 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
TNFRSF9-201ENST00000377507 NOS1P29475 1434 aa15.49■□□□□ 0.07
TNFRSF9-201ENST00000377507 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
TNFRSF9-201ENST00000377507 C14orf93Q9H972 538 aaKnown RBP15.49■□□□□ 0.07
TNFRSF9-201ENST00000377507 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
TNFRSF9-201ENST00000377507 SLFN5Q08AF3 891 aa15.48■□□□□ 0.07
TNFRSF9-201ENST00000377507 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
TNFRSF9-201ENST00000377507 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
TNFRSF9-201ENST00000377507 CRBNQ96SW2 442 aa15.48■□□□□ 0.07
TNFRSF9-201ENST00000377507 ADGRB1O14514 1584 aa15.47■□□□□ 0.07
TNFRSF9-201ENST00000377507 HECW2Q9P2P5 1572 aa15.47■□□□□ 0.07
TNFRSF9-201ENST00000377507 PPLO60437 1756 aa15.47■□□□□ 0.07
TNFRSF9-201ENST00000377507 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
TNFRSF9-201ENST00000377507 CENPJQ9HC77 1338 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF9-201ENST00000377507 POLR3AO14802 1390 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF9-201ENST00000377507 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
TNFRSF9-201ENST00000377507 ABCC3O15438 1527 aa15.45■□□□□ 0.06
TNFRSF9-201ENST00000377507 BACH2Q9BYV9 841 aa15.44■□□□□ 0.06
TNFRSF9-201ENST00000377507 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
TNFRSF9-201ENST00000377507 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF9-201ENST00000377507 PDE4AP27815 886 aa15.43■□□□□ 0.06
TNFRSF9-201ENST00000377507 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
TNFRSF9-201ENST00000377507 KDM2BQ8NHM5 1336 aa15.43■□□□□ 0.06
TNFRSF9-201ENST00000377507 NEO1Q92859 1461 aa15.43■□□□□ 0.06
TNFRSF9-201ENST00000377507 PUS7Q96PZ0 661 aaKnown RBP15.43■□□□□ 0.06
TNFRSF9-201ENST00000377507 APAF1O14727 1248 aa15.41■□□□□ 0.06
TNFRSF9-201ENST00000377507 PIK3C2BO00750 1634 aa15.41■□□□□ 0.06
TNFRSF9-201ENST00000377507 GGT6Q6P531 493 aa15.41■□□□□ 0.06
TNFRSF9-201ENST00000377507 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF9-201ENST00000377507 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
TNFRSF9-201ENST00000377507 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
TNFRSF9-201ENST00000377507 CAMSAP1Q5T5Y3 1602 aa15.4■□□□□ 0.06
TNFRSF9-201ENST00000377507 USP32Q8NFA0 1604 aa15.4■□□□□ 0.06
TNFRSF9-201ENST00000377507 QRICH2Q9H0J4 1663 aa15.4■□□□□ 0.06
TNFRSF9-201ENST00000377507 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
TNFRSF9-201ENST00000377507 E9PSI1 815 aa15.39■□□□□ 0.05
TNFRSF9-201ENST00000377507 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF9-201ENST00000377507 TRAK1Q9UPV9 953 aa15.39■□□□□ 0.05
TNFRSF9-201ENST00000377507 CHGAP10645 457 aaKnown RBP15.38■□□□□ 0.05
TNFRSF9-201ENST00000377507 ZBTB47Q9UFB7 747 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF9-201ENST00000377507 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
TNFRSF9-201ENST00000377507 SIGLEC1Q9BZZ2 1709 aa15.38■□□□□ 0.05
TNFRSF9-201ENST00000377507 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF9-201ENST00000377507 SLC12A5Q9H2X9 1139 aa15.37■□□□□ 0.05
TNFRSF9-201ENST00000377507 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
TNFRSF9-201ENST00000377507 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
TNFRSF9-201ENST00000377507 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
TNFRSF9-201ENST00000377507 DIP2CQ9Y2E4 1556 aa15.36■□□□□ 0.05
TNFRSF9-201ENST00000377507 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms