RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 SPHKAPQ2M3C7 1700 aa18.23■□□□□ 0.51
SF1-205ENST00000377394 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
SF1-205ENST00000377394 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
SF1-205ENST00000377394 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
SF1-205ENST00000377394 TCERG1O14776 1098 aaKnown RBP18.22■□□□□ 0.51
SF1-205ENST00000377394 PDE4AP27815 886 aa18.22■□□□□ 0.51
SF1-205ENST00000377394 CEP152O94986 1710 aa18.22■□□□□ 0.51
SF1-205ENST00000377394 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
SF1-205ENST00000377394 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
SF1-205ENST00000377394 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
SF1-205ENST00000377394 CLTCL1P53675 1640 aa18.22■□□□□ 0.51
SF1-205ENST00000377394 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
SF1-205ENST00000377394 PLIN1O60240 522 aa18.21■□□□□ 0.51
SF1-205ENST00000377394 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
SF1-205ENST00000377394 STAC3Q96MF2 364 aa18.21■□□□□ 0.51
SF1-205ENST00000377394 KNSTRNQ9Y448 316 aa18.2■□□□□ 0.5
SF1-205ENST00000377394 SYNMO15061 1565 aa18.2■□□□□ 0.5
SF1-205ENST00000377394 GSE1Q14687 1217 aa18.19■□□□□ 0.5
SF1-205ENST00000377394 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
SF1-205ENST00000377394 TET3O43151 1660 aa18.17■□□□□ 0.5
SF1-205ENST00000377394 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
SF1-205ENST00000377394 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
SF1-205ENST00000377394 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
SF1-205ENST00000377394 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
SF1-205ENST00000377394 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
SF1-205ENST00000377394 MS4A1P11836 297 aa18.16■□□□□ 0.5
SF1-205ENST00000377394 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
SF1-205ENST00000377394 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
SF1-205ENST00000377394 MYOM1P52179 1685 aa18.15■□□□□ 0.5
SF1-205ENST00000377394 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
SF1-205ENST00000377394 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
SF1-205ENST00000377394 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
SF1-205ENST00000377394 SLC4A3P48751 1232 aa18.14■□□□□ 0.49
SF1-205ENST00000377394 NPC1L1Q9UHC9 1359 aa18.14■□□□□ 0.49
SF1-205ENST00000377394 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
SF1-205ENST00000377394 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
SF1-205ENST00000377394 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
SF1-205ENST00000377394 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
SF1-205ENST00000377394 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
SF1-205ENST00000377394 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
SF1-205ENST00000377394 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
SF1-205ENST00000377394 C20orf194Q5TEA3 1177 aa18.12■□□□□ 0.49
SF1-205ENST00000377394 ABCA9Q8IUA7 1624 aa18.11■□□□□ 0.49
SF1-205ENST00000377394 KANK1Q14678 1352 aa18.11■□□□□ 0.49
SF1-205ENST00000377394 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SF1-205ENST00000377394 FANCAO15360 1455 aa18.1■□□□□ 0.49
SF1-205ENST00000377394 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
SF1-205ENST00000377394 KIF3BO15066 747 aa18.09■□□□□ 0.49
SF1-205ENST00000377394 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
SF1-205ENST00000377394 GOLGA2Q08379 1002 aa18.08■□□□□ 0.48
SF1-205ENST00000377394 MYOM2P54296 1465 aa18.07■□□□□ 0.48
SF1-205ENST00000377394 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
SF1-205ENST00000377394 UGGT1Q9NYU2 1555 aa18.07■□□□□ 0.48
SF1-205ENST00000377394 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
SF1-205ENST00000377394 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
SF1-205ENST00000377394 ERVK-7P63135 1459 aa18.06■□□□□ 0.48
SF1-205ENST00000377394 ABCA6Q8N139 1617 aa18.06■□□□□ 0.48
SF1-205ENST00000377394 ADGRF5Q8IZF2 1346 aa18.05■□□□□ 0.48
SF1-205ENST00000377394 SLFN5Q08AF3 891 aa18.05■□□□□ 0.48
SF1-205ENST00000377394 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
SF1-205ENST00000377394 ADGRL1O94910 1474 aa18.04■□□□□ 0.48
SF1-205ENST00000377394 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
SF1-205ENST00000377394 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.48
SF1-205ENST00000377394 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
SF1-205ENST00000377394 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.48
SF1-205ENST00000377394 PKNOX2Q96KN3 472 aa18.02■□□□□ 0.48
SF1-205ENST00000377394 IFT172Q9UG01 1749 aa18.02■□□□□ 0.47
SF1-205ENST00000377394 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
SF1-205ENST00000377394 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
SF1-205ENST00000377394 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
SF1-205ENST00000377394 KIF1BO60333 1816 aa18■□□□□ 0.47
SF1-205ENST00000377394 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
SF1-205ENST00000377394 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
SF1-205ENST00000377394 APAF1O14727 1248 aa17.99■□□□□ 0.47
SF1-205ENST00000377394 DDRGK1Q96HY6 314 aa17.99■□□□□ 0.47
SF1-205ENST00000377394 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
SF1-205ENST00000377394 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
SF1-205ENST00000377394 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.98■□□□□ 0.47
SF1-205ENST00000377394 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
SF1-205ENST00000377394 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
SF1-205ENST00000377394 FRAT2O75474 233 aaPredicted RBP17.97■□□□□ 0.47
SF1-205ENST00000377394 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
SF1-205ENST00000377394 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
SF1-205ENST00000377394 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
SF1-205ENST00000377394 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
SF1-205ENST00000377394 ADGRB3O60242 1522 aa17.95■□□□□ 0.46
SF1-205ENST00000377394 NOS1P29475 1434 aa17.94■□□□□ 0.46
SF1-205ENST00000377394 E9PSI1 815 aa17.93■□□□□ 0.46
SF1-205ENST00000377394 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
SF1-205ENST00000377394 SETBP1Q9Y6X0 1596 aa17.93■□□□□ 0.46
SF1-205ENST00000377394 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
SF1-205ENST00000377394 NGEFQ8N5V2 710 aa17.92■□□□□ 0.46
SF1-205ENST00000377394 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
SF1-205ENST00000377394 BCAR3O75815 825 aa17.92■□□□□ 0.46
SF1-205ENST00000377394 CENPJQ9HC77 1338 aaPredicted RBP17.91■□□□□ 0.46
SF1-205ENST00000377394 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
SF1-205ENST00000377394 C8orf34Q49A92 452 aa17.89■□□□□ 0.45
SF1-205ENST00000377394 NPATQ14207 1427 aa17.88■□□□□ 0.45
SF1-205ENST00000377394 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
SF1-205ENST00000377394 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms