RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 UQCRHLA0A096LP55 91 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 UQCRHP07919 91 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 RSPH4AQ5TD94 716 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 RNF214Q8ND24 703 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 FGD1P98174 961 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 DIAPH3Q9NSV4 1193 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 CFTRP13569 1480 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 HMMRO75330 724 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 REC8O95072 547 aa11.14□□□□□ -0.63
CRNKL1-201ENST00000377327 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
CRNKL1-201ENST00000377327 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 KANK1Q14678 1352 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 NINLQ9Y2I6 1382 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 MBD3O95983 291 aa11.12□□□□□ -0.63
CRNKL1-201ENST00000377327 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-201ENST00000377327 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-201ENST00000377327 SAFB2Q14151 953 aaKnown RBP eCLIP11.11□□□□□ -0.63
CRNKL1-201ENST00000377327 C8orf34Q49A92 452 aa11.1□□□□□ -0.63
CRNKL1-201ENST00000377327 ANKRD30BQ9BXX2 1392 aa11.1□□□□□ -0.63
CRNKL1-201ENST00000377327 PANK2Q9BZ23 570 aa11.1□□□□□ -0.63
CRNKL1-201ENST00000377327 RRAGDQ9NQL2 400 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-201ENST00000377327 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
CRNKL1-201ENST00000377327 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 K7ELQ4 463 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 CDC45O75419 566 aa11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 TCP11L2Q8N4U5 519 aa11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 ANKRD50Q9ULJ7 1429 aa11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 INTS3Q68E01 1043 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-201ENST00000377327 ELL2O00472 640 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-201ENST00000377327 RABEP1Q15276 862 aa11.08□□□□□ -0.64
CRNKL1-201ENST00000377327 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
CRNKL1-201ENST00000377327 DUSP27Q5VZP5 1158 aa11.07□□□□□ -0.64
CRNKL1-201ENST00000377327 HDGFL2Q7Z4V5 671 aaPredicted RBP11.07□□□□□ -0.64
CRNKL1-201ENST00000377327 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
CRNKL1-201ENST00000377327 HMGXB3Q12766 1538 aa11.07□□□□□ -0.64
CRNKL1-201ENST00000377327 TSPY26PQ9H489 355 aa11.07□□□□□ -0.64
CRNKL1-201ENST00000377327 NAP1L2Q9ULW6 460 aaPredicted RBP11.07□□□□□ -0.64
CRNKL1-201ENST00000377327 CWC22Q9HCG8 908 aaKnown RBP11.06□□□□□ -0.64
CRNKL1-201ENST00000377327 MVPQ14764 893 aaKnown RBP11.06□□□□□ -0.64
CRNKL1-201ENST00000377327 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
CRNKL1-201ENST00000377327 CCDC66A2RUB6 948 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 TPM3P06753 285 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 GOLGA6L19H0YKK7 550 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 RILPL2Q969X0 211 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 TRAK1Q9UPV9 953 aa11.05□□□□□ -0.64
CRNKL1-201ENST00000377327 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 IGHDP01880 384 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 SASS6Q6UVJ0 657 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 RIPK4P57078 832 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 PRDM10Q9NQV6 1147 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 TPM4P67936 248 aa11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 API5Q9BZZ5 524 aaKnown RBP11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
CRNKL1-201ENST00000377327 STK26Q9P289 416 aa11.03□□□□□ -0.64
CRNKL1-201ENST00000377327 NCAPD3P42695 1498 aa11.03□□□□□ -0.64
CRNKL1-201ENST00000377327 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
CRNKL1-201ENST00000377327 RPRD2Q5VT52 1461 aaKnown RBP11.03□□□□□ -0.64
CRNKL1-201ENST00000377327 BECN2A8MW95 431 aa11.03□□□□□ -0.64
CRNKL1-201ENST00000377327 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
CRNKL1-201ENST00000377327 TEX35Q5T0J7 233 aa11.02□□□□□ -0.64
CRNKL1-201ENST00000377327 WDR63Q8IWG1 891 aa11.02□□□□□ -0.64
CRNKL1-201ENST00000377327 STAC3Q96MF2 364 aa11.02□□□□□ -0.64
CRNKL1-201ENST00000377327 GCC1Q96CN9 775 aa11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 DYNC1I1O14576 645 aa11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 MPNDQ8N594 471 aa11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 ANO2Q9NQ90 1003 aa11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
CRNKL1-201ENST00000377327 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 STK31Q9BXU1 1019 aa11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 MCM5P33992 734 aa11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 MCM2P49736 904 aa11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 MTHFSP49914 203 aa11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 NEK4P51957 841 aa11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 ZHX1Q9UKY1 873 aaPredicted RBP11.01□□□□□ -0.65
CRNKL1-201ENST00000377327 CT47B1P0C2W7 299 aaPredicted RBP11□□□□□ -0.65
CRNKL1-201ENST00000377327 ATF7IPQ6VMQ6 1270 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 CHD1LQ86WJ1 897 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 NKTRP30414 1462 aaKnown RBP11□□□□□ -0.65
CRNKL1-201ENST00000377327 PDCL2Q8N4E4 241 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 CHMP3Q9Y3E7 222 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms