RNA–Protein interactions for RNA: ENST00000377060.7

CNNM3-202, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 2 BASIC

Gene CNNM3, Length 3,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-202ENST00000377060 MORC1Q86VD1 984 aa24.17■■□□□ 1.46
CNNM3-202ENST00000377060 SLC12A5Q9H2X9 1139 aa24.17■■□□□ 1.46
CNNM3-202ENST00000377060 FRAT2O75474 233 aaPredicted RBP24.17■■□□□ 1.46
CNNM3-202ENST00000377060 IGHDP01880 384 aa24.17■■□□□ 1.46
CNNM3-202ENST00000377060 ARHGEF12Q9NZN5 1544 aa24.16■■□□□ 1.46
CNNM3-202ENST00000377060 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
CNNM3-202ENST00000377060 SLFN5Q08AF3 891 aa24.16■■□□□ 1.46
CNNM3-202ENST00000377060 NUP160Q12769 1436 aa24.15■■□□□ 1.46
CNNM3-202ENST00000377060 ADGRF5Q8IZF2 1346 aa24.15■■□□□ 1.46
CNNM3-202ENST00000377060 MAGI2Q86UL8 1455 aa24.14■■□□□ 1.46
CNNM3-202ENST00000377060 COL17A1Q9UMD9 1497 aaPredicted RBP24.13■■□□□ 1.45
CNNM3-202ENST00000377060 STK26Q9P289 416 aa24.13■■□□□ 1.45
CNNM3-202ENST00000377060 CARD14Q9BXL6 1004 aa24.12■■□□□ 1.45
CNNM3-202ENST00000377060 KDM5DQ9BY66 1539 aa24.12■■□□□ 1.45
CNNM3-202ENST00000377060 TRAPPC8Q9Y2L5 1435 aa24.11■■□□□ 1.45
CNNM3-202ENST00000377060 WASHC2CQ9Y4E1 1318 aa24.1■■□□□ 1.45
CNNM3-202ENST00000377060 U2SURPO15042 1029 aaKnown RBP24.1■■□□□ 1.45
CNNM3-202ENST00000377060 C8orf34Q49A92 452 aa24.1■■□□□ 1.45
CNNM3-202ENST00000377060 SAMD9LQ8IVG5 1584 aa24.09■■□□□ 1.45
CNNM3-202ENST00000377060 SEC24BO95487 1268 aa24.09■■□□□ 1.45
CNNM3-202ENST00000377060 CENPJQ9HC77 1338 aaPredicted RBP24.09■■□□□ 1.45
CNNM3-202ENST00000377060 SHANK2Q9UPX8 1470 aa24.09■■□□□ 1.45
CNNM3-202ENST00000377060 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
CNNM3-202ENST00000377060 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
CNNM3-202ENST00000377060 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.442e-8■□□□□ 10.9
CNNM3-202ENST00000377060 ABCA8O94911 1581 aa24.06■■□□□ 1.44
CNNM3-202ENST00000377060 GSE1Q14687 1217 aa24.06■■□□□ 1.44
CNNM3-202ENST00000377060 KDM2BQ8NHM5 1336 aa24.04■■□□□ 1.44
CNNM3-202ENST00000377060 CROCC2H7BZ55 1655 aa24.03■■□□□ 1.44
CNNM3-202ENST00000377060 E9PSI1 815 aa24.03■■□□□ 1.44
CNNM3-202ENST00000377060 TCP11L2Q8N4U5 519 aa24.03■■□□□ 1.44
CNNM3-202ENST00000377060 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
CNNM3-202ENST00000377060 GPRASP1Q5JY77 1395 aa24.03■■□□□ 1.44
CNNM3-202ENST00000377060 MTHFSP49914 203 aa24.02■■□□□ 1.44
CNNM3-202ENST00000377060 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
CNNM3-202ENST00000377060 WWC1Q8IX03 1113 aa24.01■■□□□ 1.43
CNNM3-202ENST00000377060 TSR2Q969E8 191 aaKnown RBP24■■□□□ 1.43
CNNM3-202ENST00000377060 GZF1Q9H116 711 aaPredicted RBP23.98■■□□□ 1.43
CNNM3-202ENST00000377060 TTC37Q6PGP7 1564 aa23.98■■□□□ 1.43
CNNM3-202ENST00000377060 RLBP1P12271 317 aa23.97■■□□□ 1.43
CNNM3-202ENST00000377060 CABP2Q9NPB3 220 aa23.97■■□□□ 1.43
CNNM3-202ENST00000377060 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
CNNM3-202ENST00000377060 KANK1Q14678 1352 aa23.97■■□□□ 1.43
CNNM3-202ENST00000377060 FTSJ3Q8IY81 847 aaKnown RBP23.97■■□□□ 1.43
CNNM3-202ENST00000377060 USP35Q9P2H5 1018 aa23.96■■□□□ 1.43
CNNM3-202ENST00000377060 WDR7Q9Y4E6 1490 aa23.96■■□□□ 1.43
CNNM3-202ENST00000377060 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.42
CNNM3-202ENST00000377060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.421e-6■■■■□ 22
CNNM3-202ENST00000377060 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
CNNM3-202ENST00000377060 SRPK2P78362 688 aaKnown RBP23.93■■□□□ 1.42
CNNM3-202ENST00000377060 GGNBP2Q9H3C7 697 aa23.93■■□□□ 1.42
CNNM3-202ENST00000377060 PCDHB15Q9Y5E8 787 aa23.93■■□□□ 1.42
CNNM3-202ENST00000377060 ZMYM4Q5VZL5 1548 aa23.93■■□□□ 1.42
CNNM3-202ENST00000377060 ZNF521Q96K83 1311 aa23.93■■□□□ 1.42
CNNM3-202ENST00000377060 FBLN1P23142 703 aa23.92■■□□□ 1.42
CNNM3-202ENST00000377060 EIF3AQ14152 1382 aaKnown RBP23.92■■□□□ 1.42
CNNM3-202ENST00000377060 MFAP1P55081 439 aaKnown RBP23.91■■□□□ 1.42
CNNM3-202ENST00000377060 UPF2Q9HAU5 1272 aaKnown RBP23.9■■□□□ 1.42
CNNM3-202ENST00000377060 CDC42BPBQ9Y5S2 1711 aa23.9■■□□□ 1.42
CNNM3-202ENST00000377060 POGKQ9P215 609 aa23.89■■□□□ 1.42
CNNM3-202ENST00000377060 UGGT1Q9NYU2 1555 aa23.89■■□□□ 1.41
CNNM3-202ENST00000377060 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.41
CNNM3-202ENST00000377060 SCAF11Q99590 1463 aaKnown RBP23.89■■□□□ 1.41
CNNM3-202ENST00000377060 ITPRIPQ8IWB1 547 aa23.88■■□□□ 1.41
CNNM3-202ENST00000377060 CFAP53Q96M91 514 aa23.88■■□□□ 1.41
CNNM3-202ENST00000377060 ELL2O00472 640 aaPredicted RBP23.87■■□□□ 1.41
CNNM3-202ENST00000377060 NSD3Q9BZ95 1437 aa23.87■■□□□ 1.41
CNNM3-202ENST00000377060 SMC4Q9NTJ3 1288 aa23.87■■□□□ 1.41
CNNM3-202ENST00000377060 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
CNNM3-202ENST00000377060 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
CNNM3-202ENST00000377060 PRDM15P57071 1507 aaPredicted RBP23.86■■□□□ 1.41
CNNM3-202ENST00000377060 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
CNNM3-202ENST00000377060 CGNL1Q0VF96 1302 aa23.86■■□□□ 1.41
CNNM3-202ENST00000377060 RUNDC1Q96C34 613 aa23.85■■□□□ 1.41
CNNM3-202ENST00000377060 PLCH2O75038 1416 aa23.84■■□□□ 1.41
CNNM3-202ENST00000377060 MINK1Q8N4C8 1332 aaPredicted RBP23.84■■□□□ 1.41
CNNM3-202ENST00000377060 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
CNNM3-202ENST00000377060 BECN1Q14457 450 aa23.83■■□□□ 1.41
CNNM3-202ENST00000377060 FOXD4L1Q9NU39 408 aa23.82■■□□□ 1.4
CNNM3-202ENST00000377060 DUOX2Q9NRD8 1548 aa23.81■■□□□ 1.4
CNNM3-202ENST00000377060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
CNNM3-202ENST00000377060 EXOSC9Q06265 439 aaKnown RBP23.81■■□□□ 1.4
CNNM3-202ENST00000377060 CFAP65Q6ZU64 1925 aaKnown RBP23.8■■□□□ 1.4
CNNM3-202ENST00000377060 E9PCH4 1651 aa23.79■■□□□ 1.4
CNNM3-202ENST00000377060 NOS1P29475 1434 aa23.79■■□□□ 1.4
CNNM3-202ENST00000377060 NPM1P06748 294 aaKnown RBP eCLIP23.79■■□□□ 1.4
CNNM3-202ENST00000377060 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
CNNM3-202ENST00000377060 ATP10AO60312 1499 aa23.78■■□□□ 1.4
CNNM3-202ENST00000377060 RAPGEF3O95398 923 aa23.78■■□□□ 1.4
CNNM3-202ENST00000377060 PDE3AQ14432 1141 aa23.78■■□□□ 1.4
CNNM3-202ENST00000377060 TRMT2AQ8IZ69 625 aaKnown RBP23.77■■□□□ 1.4
CNNM3-202ENST00000377060 UBE2Q2Q8WVN8 375 aa23.77■■□□□ 1.4
CNNM3-202ENST00000377060 MAPK8IP3Q9UPT6 1336 aa23.77■■□□□ 1.4
CNNM3-202ENST00000377060 STAG3Q9UJ98 1225 aa23.76■■□□□ 1.39
CNNM3-202ENST00000377060 RWDD1Q9H446 243 aaPredicted RBP23.75■■□□□ 1.39
CNNM3-202ENST00000377060 PMFBP1Q8TBY8 1022 aa23.74■■□□□ 1.39
CNNM3-202ENST00000377060 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
CNNM3-202ENST00000377060 C1orf115Q9H7X2 142 aa23.74■■□□□ 1.39
CNNM3-202ENST00000377060 DZIP1LQ8IYY4 767 aaKnown RBP23.73■■□□□ 1.39
CNNM3-202ENST00000377060 MAST1Q9Y2H9 1570 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms