RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
ACTN1-202ENST00000376839 SYNMO15061 1565 aa17.39■□□□□ 0.37
ACTN1-202ENST00000376839 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
ACTN1-202ENST00000376839 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
ACTN1-202ENST00000376839 CLTCL1P53675 1640 aa17.39■□□□□ 0.37
ACTN1-202ENST00000376839 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
ACTN1-202ENST00000376839 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
ACTN1-202ENST00000376839 CEP152O94986 1710 aa17.37■□□□□ 0.37
ACTN1-202ENST00000376839 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
ACTN1-202ENST00000376839 PTPRTO14522 1441 aa17.37■□□□□ 0.37
ACTN1-202ENST00000376839 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
ACTN1-202ENST00000376839 MYOM1P52179 1685 aa17.36■□□□□ 0.37
ACTN1-202ENST00000376839 ZFYVE16Q7Z3T8 1539 aa17.36■□□□□ 0.37
ACTN1-202ENST00000376839 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
ACTN1-202ENST00000376839 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
ACTN1-202ENST00000376839 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
ACTN1-202ENST00000376839 PIK3C2GO75747 1445 aa17.35■□□□□ 0.37
ACTN1-202ENST00000376839 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
ACTN1-202ENST00000376839 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
ACTN1-202ENST00000376839 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
ACTN1-202ENST00000376839 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-202ENST00000376839 NEFMP07197 916 aa17.31■□□□□ 0.36
ACTN1-202ENST00000376839 DEPDC5O75140 1603 aa17.31■□□□□ 0.36
ACTN1-202ENST00000376839 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
ACTN1-202ENST00000376839 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
ACTN1-202ENST00000376839 TET3O43151 1660 aa17.3■□□□□ 0.36
ACTN1-202ENST00000376839 NPC1L1Q9UHC9 1359 aa17.3■□□□□ 0.36
ACTN1-202ENST00000376839 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
ACTN1-202ENST00000376839 APAF1O14727 1248 aa17.29■□□□□ 0.36
ACTN1-202ENST00000376839 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
ACTN1-202ENST00000376839 CFAP70Q5T0N1 1121 aa17.29■□□□□ 0.36
ACTN1-202ENST00000376839 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
ACTN1-202ENST00000376839 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
ACTN1-202ENST00000376839 TRMT2AQ8IZ69 625 aaKnown RBP17.28■□□□□ 0.36
ACTN1-202ENST00000376839 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-202ENST00000376839 KIF3BO15066 747 aa17.27■□□□□ 0.35
ACTN1-202ENST00000376839 ERVK-7P63135 1459 aa17.27■□□□□ 0.35
ACTN1-202ENST00000376839 ADGRF5Q8IZF2 1346 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 VWDEQ8N2E2 1590 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
ACTN1-202ENST00000376839 KANK1Q14678 1352 aa17.25■□□□□ 0.35
ACTN1-202ENST00000376839 BCAR3O75815 825 aa17.25■□□□□ 0.35
ACTN1-202ENST00000376839 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
ACTN1-202ENST00000376839 ARAP3Q8WWN8 1544 aa17.25■□□□□ 0.35
ACTN1-202ENST00000376839 SLC4A3P48751 1232 aa17.25■□□□□ 0.35
ACTN1-202ENST00000376839 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
ACTN1-202ENST00000376839 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
ACTN1-202ENST00000376839 INO80Q9ULG1 1556 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-202ENST00000376839 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-202ENST00000376839 MAP3K4Q9Y6R4 1608 aa17.23■□□□□ 0.35
ACTN1-202ENST00000376839 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
ACTN1-202ENST00000376839 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
ACTN1-202ENST00000376839 RGS3P49796 1198 aa17.22■□□□□ 0.35
ACTN1-202ENST00000376839 FANCAO15360 1455 aa17.22■□□□□ 0.35
ACTN1-202ENST00000376839 MROH1Q8NDA8 1641 aa17.21■□□□□ 0.35
ACTN1-202ENST00000376839 MYOM2P54296 1465 aa17.21■□□□□ 0.35
ACTN1-202ENST00000376839 E9PSI1 815 aa17.2■□□□□ 0.34
ACTN1-202ENST00000376839 NEURL4Q96JN8 1562 aa17.2■□□□□ 0.34
ACTN1-202ENST00000376839 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
ACTN1-202ENST00000376839 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
ACTN1-202ENST00000376839 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
ACTN1-202ENST00000376839 KIF1BO60333 1816 aa17.16■□□□□ 0.34
ACTN1-202ENST00000376839 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
ACTN1-202ENST00000376839 IGHDP01880 384 aa17.16■□□□□ 0.34
ACTN1-202ENST00000376839 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
ACTN1-202ENST00000376839 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
ACTN1-202ENST00000376839 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-202ENST00000376839 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
ACTN1-202ENST00000376839 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
ACTN1-202ENST00000376839 PPRC1Q5VV67 1664 aaKnown RBP17.14■□□□□ 0.33
ACTN1-202ENST00000376839 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
ACTN1-202ENST00000376839 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
ACTN1-202ENST00000376839 MYO3AQ8NEV4 1616 aa17.14■□□□□ 0.33
ACTN1-202ENST00000376839 NOS1P29475 1434 aa17.13■□□□□ 0.33
ACTN1-202ENST00000376839 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-202ENST00000376839 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
ACTN1-202ENST00000376839 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-202ENST00000376839 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
ACTN1-202ENST00000376839 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
ACTN1-202ENST00000376839 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-202ENST00000376839 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
ACTN1-202ENST00000376839 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
ACTN1-202ENST00000376839 COG6Q9Y2V7 657 aa17.11■□□□□ 0.33
ACTN1-202ENST00000376839 RRP7AQ9Y3A4 280 aaKnown RBP17.11■□□□□ 0.33
ACTN1-202ENST00000376839 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
ACTN1-202ENST00000376839 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
ACTN1-202ENST00000376839 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
ACTN1-202ENST00000376839 SHPRHQ149N8 1683 aa17.11■□□□□ 0.33
ACTN1-202ENST00000376839 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
ACTN1-202ENST00000376839 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
ACTN1-202ENST00000376839 MORC1Q86VD1 984 aa17.1■□□□□ 0.33
ACTN1-202ENST00000376839 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
ACTN1-202ENST00000376839 KIDINS220Q9ULH0 1771 aa17.09■□□□□ 0.33
ACTN1-202ENST00000376839 ADGRB3O60242 1522 aa17.09■□□□□ 0.33
ACTN1-202ENST00000376839 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
ACTN1-202ENST00000376839 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms