RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 NUTM2GQ5VZR2 741 aa14.35□□□□□ -0.11
HDAC6-203ENST00000376619 CENPJQ9HC77 1338 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-203ENST00000376619 TEX14Q8IWB6 1497 aa14.34□□□□□ -0.11
HDAC6-203ENST00000376619 ABCC10Q5T3U5 1492 aa14.34□□□□□ -0.11
HDAC6-203ENST00000376619 SMC4Q9NTJ3 1288 aa14.34□□□□□ -0.11
HDAC6-203ENST00000376619 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-203ENST00000376619 CEBPAP49715 358 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-203ENST00000376619 HDGFL2Q7Z4V5 671 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-203ENST00000376619 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
HDAC6-203ENST00000376619 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-203ENST00000376619 PDE4AP27815 886 aa14.32□□□□□ -0.12
HDAC6-203ENST00000376619 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
HDAC6-203ENST00000376619 DENND4BO75064 1496 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-203ENST00000376619 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
HDAC6-203ENST00000376619 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
HDAC6-203ENST00000376619 RPRD2Q5VT52 1461 aaKnown RBP14.31□□□□□ -0.12
HDAC6-203ENST00000376619 ABCA8O94911 1581 aa14.31□□□□□ -0.12
HDAC6-203ENST00000376619 ZNF428Q96B54 188 aa14.31□□□□□ -0.12
HDAC6-203ENST00000376619 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
HDAC6-203ENST00000376619 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
HDAC6-203ENST00000376619 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
HDAC6-203ENST00000376619 NECTIN2Q92692 538 aa14.3□□□□□ -0.12
HDAC6-203ENST00000376619 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
HDAC6-203ENST00000376619 KIF14Q15058 1648 aa14.29□□□□□ -0.12
HDAC6-203ENST00000376619 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
HDAC6-203ENST00000376619 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
HDAC6-203ENST00000376619 TXNDC2Q86VQ3 553 aa14.29□□□□□ -0.12
HDAC6-203ENST00000376619 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
HDAC6-203ENST00000376619 DEKP35659 375 aaKnown RBP14.28□□□□□ -0.12
HDAC6-203ENST00000376619 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
HDAC6-203ENST00000376619 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.12
HDAC6-203ENST00000376619 PLCH2O75038 1416 aa14.27□□□□□ -0.12
HDAC6-203ENST00000376619 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
HDAC6-203ENST00000376619 MSH5O43196 834 aa14.26□□□□□ -0.13
HDAC6-203ENST00000376619 PDE3BQ13370 1112 aa14.26□□□□□ -0.13
HDAC6-203ENST00000376619 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
HDAC6-203ENST00000376619 NGDNQ8NEJ9 315 aaKnown RBP14.26□□□□□ -0.13
HDAC6-203ENST00000376619 CGNL1Q0VF96 1302 aa14.26□□□□□ -0.13
HDAC6-203ENST00000376619 EVC2Q86UK5 1308 aa14.26□□□□□ -0.13
HDAC6-203ENST00000376619 SLC4A10Q6U841 1118 aa14.25□□□□□ -0.13
HDAC6-203ENST00000376619 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
HDAC6-203ENST00000376619 CABP1Q9NZU7 370 aa14.25□□□□□ -0.13
HDAC6-203ENST00000376619 KDM6BO15054 1643 aa14.25□□□□□ -0.13
HDAC6-203ENST00000376619 EIF5BO60841 1220 aaKnown RBP14.25□□□□□ -0.13
HDAC6-203ENST00000376619 RIPK4P57078 832 aa14.24□□□□□ -0.13
HDAC6-203ENST00000376619 IPO9Q96P70 1041 aaKnown RBP14.24□□□□□ -0.13
HDAC6-203ENST00000376619 PMFBP1Q8TBY8 1022 aa14.24□□□□□ -0.13
HDAC6-203ENST00000376619 THUMPD2Q9BTF0 503 aaKnown RBP14.24□□□□□ -0.13
HDAC6-203ENST00000376619 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
HDAC6-203ENST00000376619 CCDC141Q6ZP82 1450 aa14.24□□□□□ -0.13
HDAC6-203ENST00000376619 MFAP1P55081 439 aaKnown RBP14.23□□□□□ -0.13
HDAC6-203ENST00000376619 IDI1Q13907 227 aa14.23□□□□□ -0.13
HDAC6-203ENST00000376619 ERICH6BQ5W0A0 696 aa14.23□□□□□ -0.13
HDAC6-203ENST00000376619 BRD4O60885 1362 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-203ENST00000376619 ERBINQ96RT1 1412 aa14.22□□□□□ -0.13
HDAC6-203ENST00000376619 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
HDAC6-203ENST00000376619 GZF1Q9H116 711 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-203ENST00000376619 POGZQ7Z3K3 1410 aa14.2□□□□□ -0.14
HDAC6-203ENST00000376619 E9PSI1 815 aa14.19□□□□□ -0.14
HDAC6-203ENST00000376619 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
HDAC6-203ENST00000376619 TESK2Q96S53 571 aa14.19□□□□□ -0.14
HDAC6-203ENST00000376619 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-203ENST00000376619 HSPA2P54652 639 aa14.18□□□□□ -0.14
HDAC6-203ENST00000376619 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
HDAC6-203ENST00000376619 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
HDAC6-203ENST00000376619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDAC6-203ENST00000376619 DDRGK1Q96HY6 314 aa14.17□□□□□ -0.14
HDAC6-203ENST00000376619 AMPHP49418 695 aa14.17□□□□□ -0.14
HDAC6-203ENST00000376619 SYCP2Q9BX26 1530 aa14.17□□□□□ -0.14
HDAC6-203ENST00000376619 PZPP20742 1482 aa14.17□□□□□ -0.14
HDAC6-203ENST00000376619 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
HDAC6-203ENST00000376619 EXOSC9Q06265 439 aaKnown RBP14.16□□□□□ -0.14
HDAC6-203ENST00000376619 CDK19Q9BWU1 502 aa14.16□□□□□ -0.14
HDAC6-203ENST00000376619 RTF1Q92541 710 aaKnown RBP14.16□□□□□ -0.14
HDAC6-203ENST00000376619 CFAP43Q8NDM7 1665 aa14.15□□□□□ -0.14
HDAC6-203ENST00000376619 RUNDC1Q96C34 613 aa14.15□□□□□ -0.14
HDAC6-203ENST00000376619 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
HDAC6-203ENST00000376619 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
HDAC6-203ENST00000376619 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
HDAC6-203ENST00000376619 BECN1Q14457 450 aa14.14□□□□□ -0.15
HDAC6-203ENST00000376619 COG3Q96JB2 828 aa14.14□□□□□ -0.15
HDAC6-203ENST00000376619 LNPKQ9C0E8 428 aa14.14□□□□□ -0.15
HDAC6-203ENST00000376619 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-203ENST00000376619 TNNQ9UQP3 1299 aa14.14□□□□□ -0.15
HDAC6-203ENST00000376619 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
HDAC6-203ENST00000376619 NOL8Q76FK4 1167 aaKnown RBP14.13□□□□□ -0.15
HDAC6-203ENST00000376619 ZNF330Q9Y3S2 320 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-203ENST00000376619 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
HDAC6-203ENST00000376619 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-203ENST00000376619 ANKRD45Q5TZF3 282 aa14.12□□□□□ -0.15
HDAC6-203ENST00000376619 PER1O15534 1290 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-203ENST00000376619 TTC37Q6PGP7 1564 aa14.12□□□□□ -0.15
HDAC6-203ENST00000376619 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
HDAC6-203ENST00000376619 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
HDAC6-203ENST00000376619 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
HDAC6-203ENST00000376619 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
HDAC6-203ENST00000376619 XPCQ01831 940 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-203ENST00000376619 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
HDAC6-203ENST00000376619 EID1Q9Y6B2 187 aa14.11□□□□□ -0.15
HDAC6-203ENST00000376619 CENPQQ7L2Z9 268 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms