RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 TCOF1Q13428 1488 aaKnown RBP15.93■□□□□ 0.14
DDR1-224ENST00000376567 DEKP35659 375 aaKnown RBP15.93■□□□□ 0.14
DDR1-224ENST00000376567 CGNL1Q0VF96 1302 aa15.93■□□□□ 0.14
DDR1-224ENST00000376567 PZPP20742 1482 aa15.92■□□□□ 0.14
DDR1-224ENST00000376567 TPRNQ4KMQ1 711 aa15.92■□□□□ 0.14
DDR1-224ENST00000376567 IPO9Q96P70 1041 aaKnown RBP15.92■□□□□ 0.14
DDR1-224ENST00000376567 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
DDR1-224ENST00000376567 FBLN1P23142 703 aa15.92■□□□□ 0.14
DDR1-224ENST00000376567 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
DDR1-224ENST00000376567 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
DDR1-224ENST00000376567 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
DDR1-224ENST00000376567 MYH16Q9H6N6 1097 aa15.91■□□□□ 0.14
DDR1-224ENST00000376567 A0A0G2JS52 829 aa15.9■□□□□ 0.14
DDR1-224ENST00000376567 SYCP2Q9BX26 1530 aa15.9■□□□□ 0.14
DDR1-224ENST00000376567 MSH5O43196 834 aa15.9■□□□□ 0.14
DDR1-224ENST00000376567 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
DDR1-224ENST00000376567 DDRGK1Q96HY6 314 aa15.88■□□□□ 0.13
DDR1-224ENST00000376567 NUTM2GQ5VZR2 741 aa15.87■□□□□ 0.13
DDR1-224ENST00000376567 E9PSI1 815 aa15.87■□□□□ 0.13
DDR1-224ENST00000376567 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
DDR1-224ENST00000376567 RIPK4P57078 832 aa15.86■□□□□ 0.13
DDR1-224ENST00000376567 TESK2Q96S53 571 aa15.86■□□□□ 0.13
DDR1-224ENST00000376567 WAPLQ7Z5K2 1190 aa15.85■□□□□ 0.13
DDR1-224ENST00000376567 CABP1Q9NZU7 370 aa15.85■□□□□ 0.13
DDR1-224ENST00000376567 IDI1Q13907 227 aa15.85■□□□□ 0.13
DDR1-224ENST00000376567 NGDNQ8NEJ9 315 aaKnown RBP15.84■□□□□ 0.13
DDR1-224ENST00000376567 MFAP1P55081 439 aaKnown RBP15.84■□□□□ 0.13
DDR1-224ENST00000376567 NECTIN2Q92692 538 aa15.83■□□□□ 0.12
DDR1-224ENST00000376567 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
DDR1-224ENST00000376567 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
DDR1-224ENST00000376567 SLC4A10Q6U841 1118 aa15.82■□□□□ 0.12
DDR1-224ENST00000376567 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
DDR1-224ENST00000376567 BECN1Q14457 450 aa15.81■□□□□ 0.12
DDR1-224ENST00000376567 DHX29Q7Z478 1369 aaKnown RBP15.81■□□□□ 0.12
DDR1-224ENST00000376567 TEX14Q8IWB6 1497 aa15.81■□□□□ 0.12
DDR1-224ENST00000376567 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
DDR1-224ENST00000376567 SLC26A8Q96RN1 970 aa15.8■□□□□ 0.12
DDR1-224ENST00000376567 FANCAO15360 1455 aa15.8■□□□□ 0.12
DDR1-224ENST00000376567 CD109Q6YHK3 1445 aa15.8■□□□□ 0.12
DDR1-224ENST00000376567 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
DDR1-224ENST00000376567 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
DDR1-224ENST00000376567 THUMPD2Q9BTF0 503 aaKnown RBP15.8■□□□□ 0.12
DDR1-224ENST00000376567 EIF5BO60841 1220 aaKnown RBP15.79■□□□□ 0.12
DDR1-224ENST00000376567 CENPQQ7L2Z9 268 aaPredicted RBP15.79■□□□□ 0.12
DDR1-224ENST00000376567 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
DDR1-224ENST00000376567 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
DDR1-224ENST00000376567 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
DDR1-224ENST00000376567 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
DDR1-224ENST00000376567 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
DDR1-224ENST00000376567 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
DDR1-224ENST00000376567 RBM33Q96EV2 1170 aaKnown RBP15.78■□□□□ 0.12
DDR1-224ENST00000376567 CDK19Q9BWU1 502 aa15.78■□□□□ 0.12
DDR1-224ENST00000376567 DNMT1P26358 1616 aaKnown RBP15.78■□□□□ 0.12
DDR1-224ENST00000376567 GZF1Q9H116 711 aaPredicted RBP15.77■□□□□ 0.12
DDR1-224ENST00000376567 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.11
DDR1-224ENST00000376567 NOS1P29475 1434 aa15.77■□□□□ 0.11
DDR1-224ENST00000376567 NSD3Q9BZ95 1437 aa15.77■□□□□ 0.11
DDR1-224ENST00000376567 COG3Q96JB2 828 aa15.76■□□□□ 0.11
DDR1-224ENST00000376567 AMPHP49418 695 aa15.76■□□□□ 0.11
DDR1-224ENST00000376567 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
DDR1-224ENST00000376567 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
DDR1-224ENST00000376567 PLCH2O75038 1416 aa15.76■□□□□ 0.11
DDR1-224ENST00000376567 CHD1O14646 1710 aa15.76■□□□□ 0.11
DDR1-224ENST00000376567 PRKAR2BP31323 418 aa15.75■□□□□ 0.11
DDR1-224ENST00000376567 ZNF428Q96B54 188 aa15.75■□□□□ 0.11
DDR1-224ENST00000376567 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
DDR1-224ENST00000376567 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
DDR1-224ENST00000376567 ZKSCAN2Q63HK3 967 aa15.75■□□□□ 0.11
DDR1-224ENST00000376567 CFAP65Q6ZU64 1925 aaKnown RBP15.75■□□□□ 0.11
DDR1-224ENST00000376567 DENND4BO75064 1496 aaPredicted RBP15.74■□□□□ 0.11
DDR1-224ENST00000376567 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
DDR1-224ENST00000376567 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
DDR1-224ENST00000376567 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
DDR1-224ENST00000376567 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
DDR1-224ENST00000376567 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
DDR1-224ENST00000376567 C1orf115Q9H7X2 142 aa15.74■□□□□ 0.11
DDR1-224ENST00000376567 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
DDR1-224ENST00000376567 NCLP19338 710 aaKnown RBP15.73■□□□□ 0.11
DDR1-224ENST00000376567 RALGAPBQ86X10 1494 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 EID1Q9Y6B2 187 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 SLFN5Q08AF3 891 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
DDR1-224ENST00000376567 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 ANKRD45Q5TZF3 282 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 STAC3Q96MF2 364 aa15.72■□□□□ 0.11
DDR1-224ENST00000376567 ASXL2Q76L83 1435 aa15.71■□□□□ 0.11
DDR1-224ENST00000376567 MS4A1P11836 297 aa15.71■□□□□ 0.11
DDR1-224ENST00000376567 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
DDR1-224ENST00000376567 TNNQ9UQP3 1299 aa15.71■□□□□ 0.1
DDR1-224ENST00000376567 SPATA31E1Q6ZUB1 1445 aa15.7■□□□□ 0.1
DDR1-224ENST00000376567 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
DDR1-224ENST00000376567 HSP90AB1P08238 724 aaKnown RBP15.69■□□□□ 0.1
DDR1-224ENST00000376567 A2MP01023 1474 aa15.69■□□□□ 0.1
DDR1-224ENST00000376567 ITSN2Q9NZM3 1697 aa15.69■□□□□ 0.1
DDR1-224ENST00000376567 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
DDR1-224ENST00000376567 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
DDR1-224ENST00000376567 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
DDR1-224ENST00000376567 ERCC6L2Q5T890 1561 aa15.67■□□□□ 0.1
DDR1-224ENST00000376567 MBD5Q9P267 1494 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms