RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 ATP10BO94823 1461 aa16.75■□□□□ 0.27
CUL4A-203ENST00000375441 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
CUL4A-203ENST00000375441 SLFN5Q08AF3 891 aa16.75■□□□□ 0.27
CUL4A-203ENST00000375441 TESK2Q96S53 571 aa16.75■□□□□ 0.27
CUL4A-203ENST00000375441 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
CUL4A-203ENST00000375441 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
CUL4A-203ENST00000375441 STK26Q9P289 416 aa16.74■□□□□ 0.27
CUL4A-203ENST00000375441 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
CUL4A-203ENST00000375441 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
CUL4A-203ENST00000375441 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
CUL4A-203ENST00000375441 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
CUL4A-203ENST00000375441 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
CUL4A-203ENST00000375441 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
CUL4A-203ENST00000375441 NGEFQ8N5V2 710 aa16.73■□□□□ 0.27
CUL4A-203ENST00000375441 GZF1Q9H116 711 aaPredicted RBP16.73■□□□□ 0.27
CUL4A-203ENST00000375441 POGKQ9P215 609 aa16.73■□□□□ 0.27
CUL4A-203ENST00000375441 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
CUL4A-203ENST00000375441 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
CUL4A-203ENST00000375441 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
CUL4A-203ENST00000375441 MLECQ14165 292 aa16.72■□□□□ 0.27
CUL4A-203ENST00000375441 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.27
CUL4A-203ENST00000375441 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
CUL4A-203ENST00000375441 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
CUL4A-203ENST00000375441 HSCBQ8IWL3 235 aa16.7■□□□□ 0.26
CUL4A-203ENST00000375441 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
CUL4A-203ENST00000375441 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
CUL4A-203ENST00000375441 TCP11L2Q8N4U5 519 aa16.68■□□□□ 0.26
CUL4A-203ENST00000375441 FAM135AQ9P2D6 1515 aa16.68■□□□□ 0.26
CUL4A-203ENST00000375441 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
CUL4A-203ENST00000375441 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
CUL4A-203ENST00000375441 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
CUL4A-203ENST00000375441 KDM5CP41229 1560 aa16.66■□□□□ 0.26
CUL4A-203ENST00000375441 MTHFSP49914 203 aa16.66■□□□□ 0.26
CUL4A-203ENST00000375441 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
CUL4A-203ENST00000375441 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
CUL4A-203ENST00000375441 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
CUL4A-203ENST00000375441 SLC12A5Q9H2X9 1139 aa16.65■□□□□ 0.26
CUL4A-203ENST00000375441 SHANK2Q9UPX8 1470 aa16.65■□□□□ 0.26
CUL4A-203ENST00000375441 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
CUL4A-203ENST00000375441 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
CUL4A-203ENST00000375441 MBD5Q9P267 1494 aa16.64■□□□□ 0.25
CUL4A-203ENST00000375441 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
CUL4A-203ENST00000375441 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
CUL4A-203ENST00000375441 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
CUL4A-203ENST00000375441 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
CUL4A-203ENST00000375441 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
CUL4A-203ENST00000375441 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
CUL4A-203ENST00000375441 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
CUL4A-203ENST00000375441 NAP1L5Q96NT1 182 aaPredicted RBP16.61■□□□□ 0.25
CUL4A-203ENST00000375441 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
CUL4A-203ENST00000375441 COL17A1Q9UMD9 1497 aaPredicted RBP16.6■□□□□ 0.25
CUL4A-203ENST00000375441 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
CUL4A-203ENST00000375441 A2MP01023 1474 aa16.59■□□□□ 0.25
CUL4A-203ENST00000375441 IGHDP01880 384 aa16.59■□□□□ 0.25
CUL4A-203ENST00000375441 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
CUL4A-203ENST00000375441 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
CUL4A-203ENST00000375441 NCLP19338 710 aaKnown RBP16.59■□□□□ 0.25
CUL4A-203ENST00000375441 C8orf34Q49A92 452 aa16.59■□□□□ 0.25
CUL4A-203ENST00000375441 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.25
CUL4A-203ENST00000375441 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
CUL4A-203ENST00000375441 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.24
CUL4A-203ENST00000375441 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
CUL4A-203ENST00000375441 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
CUL4A-203ENST00000375441 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
CUL4A-203ENST00000375441 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
CUL4A-203ENST00000375441 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
CUL4A-203ENST00000375441 SCAPERQ9BY12 1400 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 AAMPQ13685 434 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 GPRASP1Q5JY77 1395 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 GGNBP2Q9H3C7 697 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
CUL4A-203ENST00000375441 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
CUL4A-203ENST00000375441 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
CUL4A-203ENST00000375441 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CUL4A-203ENST00000375441 NUP160Q12769 1436 aa16.54■□□□□ 0.24
CUL4A-203ENST00000375441 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
CUL4A-203ENST00000375441 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
CUL4A-203ENST00000375441 RARSP54136 660 aaKnown RBP16.54■□□□□ 0.24
CUL4A-203ENST00000375441 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
CUL4A-203ENST00000375441 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
CUL4A-203ENST00000375441 RIPK4P57078 832 aa16.53■□□□□ 0.24
CUL4A-203ENST00000375441 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
CUL4A-203ENST00000375441 WDR63Q8IWG1 891 aa16.53■□□□□ 0.24
CUL4A-203ENST00000375441 MINK1Q8N4C8 1332 aaPredicted RBP16.52■□□□□ 0.24
CUL4A-203ENST00000375441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
CUL4A-203ENST00000375441 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
CUL4A-203ENST00000375441 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.23
CUL4A-203ENST00000375441 NSD3Q9BZ95 1437 aa16.52■□□□□ 0.23
CUL4A-203ENST00000375441 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
CUL4A-203ENST00000375441 CHMP5Q9NZZ3 219 aa16.51■□□□□ 0.23
CUL4A-203ENST00000375441 ANKRD45Q5TZF3 282 aa16.51■□□□□ 0.23
CUL4A-203ENST00000375441 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
CUL4A-203ENST00000375441 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
CUL4A-203ENST00000375441 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
CUL4A-203ENST00000375441 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
CUL4A-203ENST00000375441 APBB1O00213 710 aa16.5■□□□□ 0.23
CUL4A-203ENST00000375441 GLIPR1L2Q4G1C9 344 aa16.5■□□□□ 0.23
CUL4A-203ENST00000375441 MVPQ14764 893 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms