RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SASS6Q6UVJ0 657 aa10.15□□□□□ -0.79
HSPG2-203ENST00000374695 CARMIL2Q6F5E8 1435 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 LEKR1Q6ZMV7 388 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 CPLX1O14810 134 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 SOX12O15370 315 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 NOL8Q76FK4 1167 aaKnown RBP10.14□□□□□ -0.79
HSPG2-203ENST00000374695 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
HSPG2-203ENST00000374695 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
HSPG2-203ENST00000374695 NAP1L1P55209 391 aaKnown RBP10.14□□□□□ -0.79
HSPG2-203ENST00000374695 OLFM4Q6UX06 510 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 CCDC73Q6ZRK6 1079 aa10.14□□□□□ -0.79
HSPG2-203ENST00000374695 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 IFT57Q9NWB7 429 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 SAFBQ15424 915 aaKnown RBP eCLIP10.13□□□□□ -0.79
HSPG2-203ENST00000374695 ZBED9Q6R2W3 1325 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 NGEFQ8N5V2 710 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 CNKSR2Q8WXI2 1034 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 LETM1O95202 739 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-203ENST00000374695 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.13□□□□□ -0.798e-7■■■■■ 97.2
HSPG2-203ENST00000374695 ERLIN2O94905 339 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 TRDNQ13061 729 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 FOXD4L1Q9NU39 408 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 TXLNBQ8N3L3 684 aa10.13□□□□□ -0.79
HSPG2-203ENST00000374695 ANKRD18AQ8IVF6 992 aa10.12□□□□□ -0.79
HSPG2-203ENST00000374695 SLC4A10Q6U841 1118 aa10.12□□□□□ -0.79
HSPG2-203ENST00000374695 GOLGA6L10A6NI86 522 aa10.12□□□□□ -0.79
HSPG2-203ENST00000374695 NINLQ9Y2I6 1382 aa10.12□□□□□ -0.79
HSPG2-203ENST00000374695 USP8P40818 1118 aa10.11□□□□□ -0.79
HSPG2-203ENST00000374695 ZKSCAN2Q63HK3 967 aa10.11□□□□□ -0.79
HSPG2-203ENST00000374695 RILPL2Q969X0 211 aa10.11□□□□□ -0.79
HSPG2-203ENST00000374695 MYBBP1AQ9BQG0 1328 aaKnown RBP10.11□□□□□ -0.79
HSPG2-203ENST00000374695 NASPP49321 788 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-203ENST00000374695 CTDP1Q9Y5B0 961 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-203ENST00000374695 BICD2Q8TD16 824 aa10.11□□□□□ -0.79
HSPG2-203ENST00000374695 MRE11P49959 708 aa10.11□□□□□ -0.79
HSPG2-203ENST00000374695 CHMP5Q9NZZ3 219 aa10.11□□□□□ -0.79
HSPG2-203ENST00000374695 E9PSI1 815 aa10.1□□□□□ -0.79
HSPG2-203ENST00000374695 BRMS1Q9HCU9 246 aa10.1□□□□□ -0.79
HSPG2-203ENST00000374695 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-203ENST00000374695 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-203ENST00000374695 SMARCE1Q969G3 411 aa10.1□□□□□ -0.79
HSPG2-203ENST00000374695 GTF2E1P29083 439 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-203ENST00000374695 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-203ENST00000374695 HSP90AB2PQ58FF8 381 aa10.1□□□□□ -0.79
HSPG2-203ENST00000374695 ERICH2A1L162 156 aa10.1□□□□□ -0.79
HSPG2-203ENST00000374695 CAVIN1Q6NZI2 390 aaKnown RBP10.09□□□□□ -0.79
HSPG2-203ENST00000374695 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 RAB3GAP2Q9H2M9 1393 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 OFD1O75665 1012 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 IQCEQ6IPM2 695 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 ANO2Q9NQ90 1003 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 DDX19BQ9UMR2 479 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 KIAA0754O94854 1291 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 LUC7LQ9NQ29 371 aaKnown RBP10.09□□□□□ -0.79
HSPG2-203ENST00000374695 MBD3O95983 291 aa10.09□□□□□ -0.79
HSPG2-203ENST00000374695 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
HSPG2-203ENST00000374695 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
HSPG2-203ENST00000374695 RABEP1Q15276 862 aa10.08□□□□□ -0.8
HSPG2-203ENST00000374695 SMARCA2P51531 1590 aa10.08□□□□□ -0.8
HSPG2-203ENST00000374695 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
HSPG2-203ENST00000374695 XBP1P17861 261 aa10.08□□□□□ -0.8
HSPG2-203ENST00000374695 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-203ENST00000374695 R3HCC1Q9Y3T6 440 aaKnown RBP10.07□□□□□ -0.8
HSPG2-203ENST00000374695 PDE4AP27815 886 aa10.07□□□□□ -0.8
HSPG2-203ENST00000374695 SAFB2Q14151 953 aaKnown RBP eCLIP10.07□□□□□ -0.8
HSPG2-203ENST00000374695 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
HSPG2-203ENST00000374695 PKD2Q13563 968 aa10.07□□□□□ -0.8
HSPG2-203ENST00000374695 NFXL1Q6ZNB6 911 aa10.07□□□□□ -0.8
HSPG2-203ENST00000374695 STK26Q9P289 416 aa10.07□□□□□ -0.8
HSPG2-203ENST00000374695 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 CUX2O14529 1486 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 EZRP15311 586 aaKnown RBP10.06□□□□□ -0.8
HSPG2-203ENST00000374695 CUX1P39880 1505 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 NUP155O75694 1391 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 ERC2O15083 957 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 EID1Q9Y6B2 187 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 RRP1P56182 461 aaKnown RBP10.06□□□□□ -0.8
HSPG2-203ENST00000374695 CARMIL1Q5VZK9 1371 aa10.06□□□□□ -0.8
HSPG2-203ENST00000374695 AMPHP49418 695 aa10.05□□□□□ -0.8
HSPG2-203ENST00000374695 SEPT7Q16181 437 aaKnown RBP10.05□□□□□ -0.8
HSPG2-203ENST00000374695 PDCP20941 246 aa10.05□□□□□ -0.8
HSPG2-203ENST00000374695 IFIT2P09913 472 aaKnown RBP10.05□□□□□ -0.8
HSPG2-203ENST00000374695 CT47B1P0C2W7 299 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-203ENST00000374695 DYDC1Q8WWB3 177 aa10.05□□□□□ -0.8
HSPG2-203ENST00000374695 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-203ENST00000374695 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 TXLNAP40222 546 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 HSP90AB4PQ58FF6 505 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 MCM2P49736 904 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 RSPH4AQ5TD94 716 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 VPS37DQ86XT2 251 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
HSPG2-203ENST00000374695 MAGEC2Q9UBF1 373 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-203ENST00000374695 GBP2P32456 591 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-203ENST00000374695 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
HSPG2-203ENST00000374695 MPHOSPH9Q99550 1183 aa10.03□□□□□ -0.8
HSPG2-203ENST00000374695 DDX58O95786 925 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms