RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
HMGCL-203ENST00000374490 RALBP1Q15311 655 aa18.91■□□□□ 0.62
HMGCL-203ENST00000374490 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
HMGCL-203ENST00000374490 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
HMGCL-203ENST00000374490 MROH1Q8NDA8 1641 aa18.91■□□□□ 0.62
HMGCL-203ENST00000374490 C3P01024 1663 aa18.9■□□□□ 0.62
HMGCL-203ENST00000374490 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
HMGCL-203ENST00000374490 NPATQ14207 1427 aa18.9■□□□□ 0.62
HMGCL-203ENST00000374490 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.62
HMGCL-203ENST00000374490 ZMYM3Q14202 1370 aa18.89■□□□□ 0.62
HMGCL-203ENST00000374490 SETD1BQ9UPS6 1966 aaKnown RBP18.89■□□□□ 0.62
HMGCL-203ENST00000374490 STRCQ7RTU9 1775 aa18.87■□□□□ 0.61
HMGCL-203ENST00000374490 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
HMGCL-203ENST00000374490 SPHKAPQ2M3C7 1700 aa18.87■□□□□ 0.61
HMGCL-203ENST00000374490 GGT6Q6P531 493 aa18.85■□□□□ 0.61
HMGCL-203ENST00000374490 CEP152O94986 1710 aa18.84■□□□□ 0.61
HMGCL-203ENST00000374490 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
HMGCL-203ENST00000374490 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
HMGCL-203ENST00000374490 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
HMGCL-203ENST00000374490 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.61
HMGCL-203ENST00000374490 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.6
HMGCL-203ENST00000374490 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.6
HMGCL-203ENST00000374490 TRPM2O94759 1503 aa18.83■□□□□ 0.6
HMGCL-203ENST00000374490 EFCAB6Q5THR3 1501 aa18.83■□□□□ 0.6
HMGCL-203ENST00000374490 LMTK2Q8IWU2 1503 aa18.83■□□□□ 0.6
HMGCL-203ENST00000374490 STAC3Q96MF2 364 aa18.82■□□□□ 0.6
HMGCL-203ENST00000374490 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
HMGCL-203ENST00000374490 MROH2AA6NES4 1674 aa18.8■□□□□ 0.6
HMGCL-203ENST00000374490 CAMSAP1Q5T5Y3 1602 aa18.79■□□□□ 0.6
HMGCL-203ENST00000374490 IRX6P78412 446 aaPredicted RBP18.79■□□□□ 0.6
HMGCL-203ENST00000374490 INSRP06213 1382 aa18.79■□□□□ 0.6
HMGCL-203ENST00000374490 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
HMGCL-203ENST00000374490 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
HMGCL-203ENST00000374490 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
HMGCL-203ENST00000374490 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
HMGCL-203ENST00000374490 DISP3Q9P2K9 1392 aa18.77■□□□□ 0.6
HMGCL-203ENST00000374490 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
HMGCL-203ENST00000374490 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.59
HMGCL-203ENST00000374490 LTBP4Q8N2S1 1624 aa18.76■□□□□ 0.59
HMGCL-203ENST00000374490 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
HMGCL-203ENST00000374490 ABCC3O15438 1527 aa18.75■□□□□ 0.59
HMGCL-203ENST00000374490 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
HMGCL-203ENST00000374490 TMF1P82094 1093 aa18.74■□□□□ 0.59
HMGCL-203ENST00000374490 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
HMGCL-203ENST00000374490 NBPF1Q3BBV0 1214 aa18.74■□□□□ 0.59
HMGCL-203ENST00000374490 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
HMGCL-203ENST00000374490 TESK2Q96S53 571 aa18.73■□□□□ 0.59
HMGCL-203ENST00000374490 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
HMGCL-203ENST00000374490 ZNF335Q9H4Z2 1342 aaPredicted RBP18.72■□□□□ 0.59
HMGCL-203ENST00000374490 CEP170BQ9Y4F5 1589 aaPredicted RBP18.71■□□□□ 0.59
HMGCL-203ENST00000374490 KIF1BO60333 1816 aa18.7■□□□□ 0.58
HMGCL-203ENST00000374490 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
HMGCL-203ENST00000374490 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
HMGCL-203ENST00000374490 PDE3BQ13370 1112 aa18.7■□□□□ 0.58
HMGCL-203ENST00000374490 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
HMGCL-203ENST00000374490 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
HMGCL-203ENST00000374490 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
HMGCL-203ENST00000374490 A2ML1A8K2U0 1454 aa18.67■□□□□ 0.58
HMGCL-203ENST00000374490 ZNF142P52746 1687 aaPredicted RBP18.67■□□□□ 0.58
HMGCL-203ENST00000374490 UBAP1LF5GYI3 381 aa18.67■□□□□ 0.58
HMGCL-203ENST00000374490 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
HMGCL-203ENST00000374490 TNRQ92752 1358 aa18.66■□□□□ 0.58
HMGCL-203ENST00000374490 CFAP65Q6ZU64 1925 aaKnown RBP18.65■□□□□ 0.58
HMGCL-203ENST00000374490 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
HMGCL-203ENST00000374490 UGGT1Q9NYU2 1555 aa18.65■□□□□ 0.58
HMGCL-203ENST00000374490 KIAA1210Q9ULL0 1709 aa18.64■□□□□ 0.58
HMGCL-203ENST00000374490 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
HMGCL-203ENST00000374490 ILDR2Q71H61 639 aa18.63■□□□□ 0.57
HMGCL-203ENST00000374490 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
HMGCL-203ENST00000374490 ARHGAP31Q2M1Z3 1444 aa18.63■□□□□ 0.57
HMGCL-203ENST00000374490 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
HMGCL-203ENST00000374490 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
HMGCL-203ENST00000374490 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
HMGCL-203ENST00000374490 PANK3Q9H999 370 aa18.61■□□□□ 0.57
HMGCL-203ENST00000374490 SYNMO15061 1565 aa18.61■□□□□ 0.57
HMGCL-203ENST00000374490 MYOM2P54296 1465 aa18.6■□□□□ 0.57
HMGCL-203ENST00000374490 SOCS7O14512 581 aa18.6■□□□□ 0.57
HMGCL-203ENST00000374490 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
HMGCL-203ENST00000374490 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
HMGCL-203ENST00000374490 NOS1P29475 1434 aa18.59■□□□□ 0.57
HMGCL-203ENST00000374490 ANKLE2Q86XL3 938 aa18.59■□□□□ 0.57
HMGCL-203ENST00000374490 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
HMGCL-203ENST00000374490 IFT172Q9UG01 1749 aa18.58■□□□□ 0.56
HMGCL-203ENST00000374490 PIK3C2BO00750 1634 aa18.57■□□□□ 0.56
HMGCL-203ENST00000374490 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
HMGCL-203ENST00000374490 NPC1L1Q9UHC9 1359 aa18.56■□□□□ 0.56
HMGCL-203ENST00000374490 NLRP1Q9C000 1473 aa18.56■□□□□ 0.56
HMGCL-203ENST00000374490 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
HMGCL-203ENST00000374490 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
HMGCL-203ENST00000374490 CC2D1BQ5T0F9 858 aaKnown RBP18.54■□□□□ 0.56
HMGCL-203ENST00000374490 TOM1O60784 492 aa18.53■□□□□ 0.56
HMGCL-203ENST00000374490 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
HMGCL-203ENST00000374490 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
HMGCL-203ENST00000374490 CPS1P31327 1500 aa18.53■□□□□ 0.56
HMGCL-203ENST00000374490 PPLO60437 1756 aa18.51■□□□□ 0.55
HMGCL-203ENST00000374490 ASXL1Q8IXJ9 1541 aa18.51■□□□□ 0.55
HMGCL-203ENST00000374490 PIP4K2BP78356 416 aa18.5■□□□□ 0.55
HMGCL-203ENST00000374490 NPHP4O75161 1426 aaPredicted RBP18.5■□□□□ 0.55
HMGCL-203ENST00000374490 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
HMGCL-203ENST00000374490 ERVK-7P63135 1459 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms