RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 MINK1Q8N4C8 1332 aaPredicted RBP17.77■□□□□ 0.44
SNX30-201ENST00000374232 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.43
SNX30-201ENST00000374232 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.43
SNX30-201ENST00000374232 ABCC8Q09428 1581 aa17.77■□□□□ 0.43
SNX30-201ENST00000374232 APAF1O14727 1248 aa17.76■□□□□ 0.43
SNX30-201ENST00000374232 PDILTQ8N807 584 aa17.76■□□□□ 0.43
SNX30-201ENST00000374232 HMOX1P09601 288 aa17.76■□□□□ 0.43
SNX30-201ENST00000374232 ZFYVE27Q5T4F4 411 aa17.76■□□□□ 0.43
SNX30-201ENST00000374232 EID1Q9Y6B2 187 aa17.76■□□□□ 0.43
SNX30-201ENST00000374232 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
SNX30-201ENST00000374232 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SNX30-201ENST00000374232 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
SNX30-201ENST00000374232 R3HCC1Q9Y3T6 440 aaKnown RBP17.75■□□□□ 0.43
SNX30-201ENST00000374232 CCDC43Q96MW1 224 aaKnown RBP17.75■□□□□ 0.43
SNX30-201ENST00000374232 CCDC70Q6NSX1 233 aa17.75■□□□□ 0.43
SNX30-201ENST00000374232 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
SNX30-201ENST00000374232 CUX2O14529 1486 aa17.75■□□□□ 0.43
SNX30-201ENST00000374232 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
SNX30-201ENST00000374232 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
SNX30-201ENST00000374232 TERF2IPQ9NYB0 399 aa17.74■□□□□ 0.43
SNX30-201ENST00000374232 RRP1P56182 461 aaKnown RBP17.74■□□□□ 0.43
SNX30-201ENST00000374232 TRIM29Q14134 588 aa17.73■□□□□ 0.43
SNX30-201ENST00000374232 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
SNX30-201ENST00000374232 CEBPZQ03701 1054 aaKnown RBP17.72■□□□□ 0.43
SNX30-201ENST00000374232 C11orf95C9JLR9 678 aaPredicted RBP17.72■□□□□ 0.43
SNX30-201ENST00000374232 PLCD4Q9BRC7 762 aa17.72■□□□□ 0.43
SNX30-201ENST00000374232 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
SNX30-201ENST00000374232 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
SNX30-201ENST00000374232 ODF2Q5BJF6 829 aa17.71■□□□□ 0.43
SNX30-201ENST00000374232 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
SNX30-201ENST00000374232 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.43
SNX30-201ENST00000374232 CT47A1Q5JQC4 288 aaPredicted RBP17.71■□□□□ 0.43
SNX30-201ENST00000374232 ATP2B1P20020 1258 aa17.71■□□□□ 0.43
SNX30-201ENST00000374232 IFIT2P09913 472 aaKnown RBP17.7■□□□□ 0.42
SNX30-201ENST00000374232 CPLX1O14810 134 aa17.7■□□□□ 0.42
SNX30-201ENST00000374232 CENPQQ7L2Z9 268 aaPredicted RBP17.7■□□□□ 0.42
SNX30-201ENST00000374232 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
SNX30-201ENST00000374232 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
SNX30-201ENST00000374232 NEUROD6Q96NK8 337 aa17.69■□□□□ 0.42
SNX30-201ENST00000374232 BRPF1P55201 1214 aaPredicted RBP17.69■□□□□ 0.42
SNX30-201ENST00000374232 IPO7O95373 1038 aaKnown RBP17.68■□□□□ 0.42
SNX30-201ENST00000374232 ZKSCAN2Q63HK3 967 aa17.68■□□□□ 0.42
SNX30-201ENST00000374232 SPC24Q8NBT2 197 aa17.68■□□□□ 0.42
SNX30-201ENST00000374232 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
SNX30-201ENST00000374232 CALRP27797 417 aaKnown RBP17.67■□□□□ 0.42
SNX30-201ENST00000374232 NLRP13Q86W25 1043 aa17.67■□□□□ 0.42
SNX30-201ENST00000374232 MAP4K4O95819 1239 aaPredicted RBP17.67■□□□□ 0.42
SNX30-201ENST00000374232 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
SNX30-201ENST00000374232 TEFQ10587 303 aa17.67■□□□□ 0.42
SNX30-201ENST00000374232 PAF1Q8N7H5 531 aa17.67■□□□□ 0.42
SNX30-201ENST00000374232 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
SNX30-201ENST00000374232 RIPK4P57078 832 aa17.66■□□□□ 0.42
SNX30-201ENST00000374232 GPS2Q13227 327 aa17.66■□□□□ 0.42
SNX30-201ENST00000374232 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
SNX30-201ENST00000374232 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNX30-201ENST00000374232 SASS6Q6UVJ0 657 aa17.66■□□□□ 0.42
SNX30-201ENST00000374232 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
SNX30-201ENST00000374232 BRPF3Q9ULD4 1205 aa17.65■□□□□ 0.42
SNX30-201ENST00000374232 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
SNX30-201ENST00000374232 COG3Q96JB2 828 aa17.65■□□□□ 0.42
SNX30-201ENST00000374232 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
SNX30-201ENST00000374232 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
SNX30-201ENST00000374232 IKQ13123 557 aaPredicted RBP17.64■□□□□ 0.41
SNX30-201ENST00000374232 EPS15P42566 896 aa17.64■□□□□ 0.41
SNX30-201ENST00000374232 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
SNX30-201ENST00000374232 HSP90AB2PQ58FF8 381 aa17.63■□□□□ 0.41
SNX30-201ENST00000374232 EIF3AQ14152 1382 aaKnown RBP17.63■□□□□ 0.41
SNX30-201ENST00000374232 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SNX30-201ENST00000374232 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
SNX30-201ENST00000374232 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
SNX30-201ENST00000374232 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
SNX30-201ENST00000374232 TMEM132AQ24JP5 1023 aa17.62■□□□□ 0.41
SNX30-201ENST00000374232 TRDNQ13061 729 aa17.62■□□□□ 0.41
SNX30-201ENST00000374232 ANKRD20A12PQ8NF67 263 aa17.62■□□□□ 0.41
SNX30-201ENST00000374232 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
SNX30-201ENST00000374232 ERICH2A1L162 156 aa17.61■□□□□ 0.41
SNX30-201ENST00000374232 CPLX2Q6PUV4 134 aaKnown RBP17.61■□□□□ 0.41
SNX30-201ENST00000374232 CAGE1Q8TC20 777 aa17.61■□□□□ 0.41
SNX30-201ENST00000374232 MAP7D2Q96T17 732 aa17.61■□□□□ 0.41
SNX30-201ENST00000374232 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
SNX30-201ENST00000374232 MNS1Q8NEH6 495 aa17.6■□□□□ 0.41
SNX30-201ENST00000374232 CCDC47Q96A33 483 aaKnown RBP17.6■□□□□ 0.41
SNX30-201ENST00000374232 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
SNX30-201ENST00000374232 FAM177A1Q8N128 213 aaPredicted RBP17.6■□□□□ 0.41
SNX30-201ENST00000374232 STK3Q13188 491 aa17.6■□□□□ 0.41
SNX30-201ENST00000374232 CAVIN1Q6NZI2 390 aaKnown RBP17.6■□□□□ 0.41
SNX30-201ENST00000374232 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
SNX30-201ENST00000374232 RBM33Q96EV2 1170 aaKnown RBP17.59■□□□□ 0.41
SNX30-201ENST00000374232 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
SNX30-201ENST00000374232 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
SNX30-201ENST00000374232 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
SNX30-201ENST00000374232 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
SNX30-201ENST00000374232 NFKBIBQ15653 356 aa17.58■□□□□ 0.41
SNX30-201ENST00000374232 ATP6V1DQ9Y5K8 247 aa17.58■□□□□ 0.4
SNX30-201ENST00000374232 SMC2O95347 1197 aa17.58■□□□□ 0.4
SNX30-201ENST00000374232 G3BP1Q13283 466 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNX30-201ENST00000374232 SKOR2Q2VWA4 1001 aaPredicted RBP17.57■□□□□ 0.4
SNX30-201ENST00000374232 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
SNX30-201ENST00000374232 PSME1Q06323 249 aa17.56■□□□□ 0.4
SNX30-201ENST00000374232 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms