RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 SLC52A1Q9NWF4 448 aa21.8■■□□□ 1.08
HDAC8-209ENST00000373589 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
HDAC8-209ENST00000373589 TESK2Q96S53 571 aa21.78■■□□□ 1.08
HDAC8-209ENST00000373589 IQGAP1P46940 1657 aa21.78■■□□□ 1.08
HDAC8-209ENST00000373589 PPLO60437 1756 aa21.78■■□□□ 1.08
HDAC8-209ENST00000373589 IDI1Q13907 227 aa21.77■■□□□ 1.08
HDAC8-209ENST00000373589 ERVK-7P63135 1459 aa21.77■■□□□ 1.08
HDAC8-209ENST00000373589 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
HDAC8-209ENST00000373589 CLTCQ00610 1675 aaKnown RBP21.76■■□□□ 1.07
HDAC8-209ENST00000373589 CFAP70Q5T0N1 1121 aa21.74■■□□□ 1.07
HDAC8-209ENST00000373589 FBXO31Q5XUX0 539 aaPredicted RBP21.74■■□□□ 1.07
HDAC8-209ENST00000373589 PIK3C2GO75747 1445 aa21.73■■□□□ 1.07
HDAC8-209ENST00000373589 NEXMIFQ5QGS0 1516 aa21.72■■□□□ 1.07
HDAC8-209ENST00000373589 MLECQ14165 292 aa21.72■■□□□ 1.07
HDAC8-209ENST00000373589 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
HDAC8-209ENST00000373589 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
HDAC8-209ENST00000373589 TMEM131LA2VDJ0 1609 aa21.7■■□□□ 1.06
HDAC8-209ENST00000373589 PRKRIP1Q9H875 184 aaPredicted RBP21.7■■□□□ 1.06
HDAC8-209ENST00000373589 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
HDAC8-209ENST00000373589 DISP3Q9P2K9 1392 aa21.69■■□□□ 1.06
HDAC8-209ENST00000373589 SETBP1Q9Y6X0 1596 aa21.69■■□□□ 1.06
HDAC8-209ENST00000373589 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
HDAC8-209ENST00000373589 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
HDAC8-209ENST00000373589 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
HDAC8-209ENST00000373589 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
HDAC8-209ENST00000373589 TMF1P82094 1093 aa21.67■■□□□ 1.06
HDAC8-209ENST00000373589 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
HDAC8-209ENST00000373589 ZMYM3Q14202 1370 aa21.65■■□□□ 1.06
HDAC8-209ENST00000373589 ADGRB1O14514 1584 aa21.64■■□□□ 1.06
HDAC8-209ENST00000373589 MYO5BQ9ULV0 1848 aa21.63■■□□□ 1.05
HDAC8-209ENST00000373589 ESF1Q9H501 851 aaKnown RBP21.62■■□□□ 1.05
HDAC8-209ENST00000373589 MYO3AQ8NEV4 1616 aa21.59■■□□□ 1.05
HDAC8-209ENST00000373589 NUTM2DQ5VT03 806 aaPredicted RBP21.58■■□□□ 1.05
HDAC8-209ENST00000373589 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.04
HDAC8-209ENST00000373589 SLC24A1O60721 1099 aa21.58■■□□□ 1.04
HDAC8-209ENST00000373589 SBNO2Q9Y2G9 1366 aa21.57■■□□□ 1.04
HDAC8-209ENST00000373589 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
HDAC8-209ENST00000373589 PER1O15534 1290 aaPredicted RBP21.55■■□□□ 1.04
HDAC8-209ENST00000373589 TMEM132EQ6IEE7 984 aa21.54■■□□□ 1.04
HDAC8-209ENST00000373589 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
HDAC8-209ENST00000373589 CCDC184Q52MB2 194 aa21.53■■□□□ 1.04
HDAC8-209ENST00000373589 KTN1Q86UP2 1357 aaKnown RBP21.52■■□□□ 1.04
HDAC8-209ENST00000373589 CENPJQ9HC77 1338 aaPredicted RBP21.52■■□□□ 1.03
HDAC8-209ENST00000373589 TNRQ92752 1358 aa21.51■■□□□ 1.03
HDAC8-209ENST00000373589 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
HDAC8-209ENST00000373589 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
HDAC8-209ENST00000373589 PANK3Q9H999 370 aa21.49■■□□□ 1.03
HDAC8-209ENST00000373589 RIMS2Q9UQ26 1411 aa21.49■■□□□ 1.03
HDAC8-209ENST00000373589 SCAF1Q9H7N4 1312 aaKnown RBP21.47■■□□□ 1.03
HDAC8-209ENST00000373589 RALBP1Q15311 655 aa21.47■■□□□ 1.03
HDAC8-209ENST00000373589 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
HDAC8-209ENST00000373589 KDM5AP29375 1690 aaKnown RBP21.47■■□□□ 1.03
HDAC8-209ENST00000373589 MYOM1P52179 1685 aa21.45■■□□□ 1.02
HDAC8-209ENST00000373589 ALKQ9UM73 1620 aa21.45■■□□□ 1.02
HDAC8-209ENST00000373589 ARHGEF28Q8N1W1 1705 aaKnown RBP21.45■■□□□ 1.02
HDAC8-209ENST00000373589 QRICH2Q9H0J4 1663 aa21.45■■□□□ 1.02
HDAC8-209ENST00000373589 PARD3Q8TEW0 1356 aa21.45■■□□□ 1.02
HDAC8-209ENST00000373589 CNGB1Q14028 1251 aaPredicted RBP21.42■■□□□ 1.02
HDAC8-209ENST00000373589 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
HDAC8-209ENST00000373589 NLRP1Q9C000 1473 aa21.42■■□□□ 1.02
HDAC8-209ENST00000373589 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
HDAC8-209ENST00000373589 YTHDC2Q9H6S0 1430 aaKnown RBP21.41■■□□□ 1.02
HDAC8-209ENST00000373589 FER1L4A9Z1Z3 1794 aa21.41■■□□□ 1.02
HDAC8-209ENST00000373589 C3P01024 1663 aa21.4■■□□□ 1.02
HDAC8-209ENST00000373589 UBR1Q8IWV7 1749 aa21.4■■□□□ 1.02
HDAC8-209ENST00000373589 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
HDAC8-209ENST00000373589 PTPRMP28827 1452 aa21.39■■□□□ 1.01
HDAC8-209ENST00000373589 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
HDAC8-209ENST00000373589 TMEM2Q9UHN6 1383 aa21.38■■□□□ 1.01
HDAC8-209ENST00000373589 PUS7Q96PZ0 661 aaKnown RBP21.38■■□□□ 1.01
HDAC8-209ENST00000373589 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
HDAC8-209ENST00000373589 BRD4O60885 1362 aaPredicted RBP21.37■■□□□ 1.01
HDAC8-209ENST00000373589 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
HDAC8-209ENST00000373589 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
HDAC8-209ENST00000373589 NRXN3Q9Y4C0 1643 aa21.36■■□□□ 1.01
HDAC8-209ENST00000373589 STK26Q9P289 416 aa21.36■■□□□ 1.01
HDAC8-209ENST00000373589 FAM9BQ8IZU0 186 aa21.35■■□□□ 1.01
HDAC8-209ENST00000373589 KNSTRNQ9Y448 316 aa21.35■■□□□ 1.01
HDAC8-209ENST00000373589 AMER1Q5JTC6 1135 aaPredicted RBP21.35■■□□□ 1.01
HDAC8-209ENST00000373589 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
HDAC8-209ENST00000373589 NPC1L1Q9UHC9 1359 aa21.34■■□□□ 1.01
HDAC8-209ENST00000373589 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
HDAC8-209ENST00000373589 HNRNPUQ00839 825 aaKnown RBP eCLIP21.33■■□□□ 1.01
HDAC8-209ENST00000373589 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
HDAC8-209ENST00000373589 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
HDAC8-209ENST00000373589 DLC1Q96QB1 1528 aa21.33■■□□□ 1
HDAC8-209ENST00000373589 TMC1Q8TDI8 760 aa21.32■■□□□ 1
HDAC8-209ENST00000373589 PNISRQ8TF01 805 aaKnown RBP21.32■■□□□ 1
HDAC8-209ENST00000373589 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
HDAC8-209ENST00000373589 PRAM1Q96QH2 718 aa21.3■■□□□ 1
HDAC8-209ENST00000373589 ABCC11Q96J66 1382 aa21.3■■□□□ 1
HDAC8-209ENST00000373589 CARD14Q9BXL6 1004 aa21.29■■□□□ 1
HDAC8-209ENST00000373589 METP08581 1390 aa21.27■■□□□ 1
HDAC8-209ENST00000373589 SAFB2Q14151 953 aaKnown RBP eCLIP21.27■■□□□ 1
HDAC8-209ENST00000373589 POGKQ9P215 609 aa21.27■■□□□ 1
HDAC8-209ENST00000373589 SLIT1O75093 1534 aa21.27■■□□□ 1
HDAC8-209ENST00000373589 ARHGAP23Q9P227 1491 aa21.26■□□□□ 0.99
HDAC8-209ENST00000373589 PLEKHG1Q9ULL1 1385 aa21.26■□□□□ 0.99
HDAC8-209ENST00000373589 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
HDAC8-209ENST00000373589 LTKP29376 864 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms