RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
PABPC4-203ENST00000372858 GSE1Q14687 1217 aa21.6■■□□□ 1.05
PABPC4-203ENST00000372858 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
PABPC4-203ENST00000372858 RNF17Q9BXT8 1623 aaKnown RBP21.59■■□□□ 1.05
PABPC4-203ENST00000372858 PLCH2O75038 1416 aa21.59■■□□□ 1.05
PABPC4-203ENST00000372858 ANO8Q9HCE9 1232 aaPredicted RBP21.59■■□□□ 1.05
PABPC4-203ENST00000372858 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.05
PABPC4-203ENST00000372858 STAC3Q96MF2 364 aa21.57■■□□□ 1.04
PABPC4-203ENST00000372858 ZNF521Q96K83 1311 aa21.57■■□□□ 1.04
PABPC4-203ENST00000372858 C8orf34Q49A92 452 aa21.57■■□□□ 1.04
PABPC4-203ENST00000372858 CHD1O14646 1710 aa21.55■■□□□ 1.04
PABPC4-203ENST00000372858 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
PABPC4-203ENST00000372858 SLFN5Q08AF3 891 aa21.54■■□□□ 1.04
PABPC4-203ENST00000372858 SCAF11Q99590 1463 aaKnown RBP21.53■■□□□ 1.04
PABPC4-203ENST00000372858 TRAPPC8Q9Y2L5 1435 aa21.53■■□□□ 1.04
PABPC4-203ENST00000372858 MADDQ8WXG6 1647 aa21.53■■□□□ 1.04
PABPC4-203ENST00000372858 RGS3P49796 1198 aa21.53■■□□□ 1.04
PABPC4-203ENST00000372858 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
PABPC4-203ENST00000372858 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
PABPC4-203ENST00000372858 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
PABPC4-203ENST00000372858 SYNMO15061 1565 aa21.5■■□□□ 1.03
PABPC4-203ENST00000372858 EIF3AQ14152 1382 aaKnown RBP21.5■■□□□ 1.03
PABPC4-203ENST00000372858 ABCC1P33527 1531 aa21.49■■□□□ 1.03
PABPC4-203ENST00000372858 ERCC6L2Q5T890 1561 aa21.49■■□□□ 1.03
PABPC4-203ENST00000372858 PIK3C2GO75747 1445 aa21.49■■□□□ 1.03
PABPC4-203ENST00000372858 SCAPERQ9BY12 1400 aa21.49■■□□□ 1.03
PABPC4-203ENST00000372858 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
PABPC4-203ENST00000372858 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
PABPC4-203ENST00000372858 TRMT2AQ8IZ69 625 aaKnown RBP21.48■■□□□ 1.03
PABPC4-203ENST00000372858 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
PABPC4-203ENST00000372858 TRPM2O94759 1503 aa21.48■■□□□ 1.03
PABPC4-203ENST00000372858 CCDC146Q8IYE0 955 aa21.48■■□□□ 1.03
PABPC4-203ENST00000372858 NPC1L1Q9UHC9 1359 aa21.46■■□□□ 1.03
PABPC4-203ENST00000372858 SPHKAPQ2M3C7 1700 aa21.45■■□□□ 1.02
PABPC4-203ENST00000372858 APAF1O14727 1248 aa21.45■■□□□ 1.02
PABPC4-203ENST00000372858 SLC24A1O60721 1099 aa21.45■■□□□ 1.02
PABPC4-203ENST00000372858 PTPRTO14522 1441 aa21.45■■□□□ 1.02
PABPC4-203ENST00000372858 RTEL1-TNFRSF6BF6WH68 1400 aa21.44■■□□□ 1.02
PABPC4-203ENST00000372858 KANK1Q14678 1352 aa21.44■■□□□ 1.02
PABPC4-203ENST00000372858 SPINK5Q9NQ38 1064 aaPredicted RBP21.44■■□□□ 1.02
PABPC4-203ENST00000372858 CEP152O94986 1710 aa21.43■■□□□ 1.02
PABPC4-203ENST00000372858 BCAR3O75815 825 aa21.43■■□□□ 1.02
PABPC4-203ENST00000372858 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
PABPC4-203ENST00000372858 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
PABPC4-203ENST00000372858 E9PSI1 815 aa21.42■■□□□ 1.02
PABPC4-203ENST00000372858 FRAT2O75474 233 aaPredicted RBP21.42■■□□□ 1.02
PABPC4-203ENST00000372858 NKTRP30414 1462 aaKnown RBP21.41■■□□□ 1.02
PABPC4-203ENST00000372858 CLTCL1P53675 1640 aa21.41■■□□□ 1.02
PABPC4-203ENST00000372858 KIF3BO15066 747 aa21.38■■□□□ 1.01
PABPC4-203ENST00000372858 CFAP70Q5T0N1 1121 aa21.38■■□□□ 1.01
PABPC4-203ENST00000372858 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
PABPC4-203ENST00000372858 IGHDP01880 384 aa21.37■■□□□ 1.01
PABPC4-203ENST00000372858 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
PABPC4-203ENST00000372858 MYOM1P52179 1685 aa21.37■■□□□ 1.01
PABPC4-203ENST00000372858 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
PABPC4-203ENST00000372858 TET3O43151 1660 aa21.36■■□□□ 1.01
PABPC4-203ENST00000372858 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
PABPC4-203ENST00000372858 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
PABPC4-203ENST00000372858 PDE3AQ14432 1141 aa21.35■■□□□ 1.01
PABPC4-203ENST00000372858 PRKCSHP14314 528 aaPredicted RBP21.34■■□□□ 1.01
PABPC4-203ENST00000372858 DEPDC5O75140 1603 aa21.33■■□□□ 1.01
PABPC4-203ENST00000372858 KIAA1210Q9ULL0 1709 aa21.33■■□□□ 1.01
PABPC4-203ENST00000372858 CANXP27824 592 aaKnown RBP21.32■■□□□ 1
PABPC4-203ENST00000372858 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
PABPC4-203ENST00000372858 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
PABPC4-203ENST00000372858 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
PABPC4-203ENST00000372858 ADGRF5Q8IZF2 1346 aa21.31■■□□□ 1
PABPC4-203ENST00000372858 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
PABPC4-203ENST00000372858 CLUAP1Q96AJ1 413 aa21.31■■□□□ 1
PABPC4-203ENST00000372858 USP19O94966 1318 aa21.31■■□□□ 1
PABPC4-203ENST00000372858 CENPJQ9HC77 1338 aaPredicted RBP21.31■■□□□ 1
PABPC4-203ENST00000372858 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.31■■□□□ 1
PABPC4-203ENST00000372858 ERVK-7P63135 1459 aa21.31■■□□□ 1
PABPC4-203ENST00000372858 COG6Q9Y2V7 657 aa21.3■■□□□ 1
PABPC4-203ENST00000372858 ATP7AQ04656 1500 aa21.29■■□□□ 1
PABPC4-203ENST00000372858 BECN1Q14457 450 aa21.29■■□□□ 1
PABPC4-203ENST00000372858 PANK1Q8TE04 598 aa21.29■■□□□ 1
PABPC4-203ENST00000372858 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
PABPC4-203ENST00000372858 MAP3K4Q9Y6R4 1608 aa21.28■■□□□ 1
PABPC4-203ENST00000372858 MYOM2P54296 1465 aa21.27■■□□□ 1
PABPC4-203ENST00000372858 SEC24BO95487 1268 aa21.27■■□□□ 1
PABPC4-203ENST00000372858 WWC1Q8IX03 1113 aa21.27■■□□□ 1
PABPC4-203ENST00000372858 FANCAO15360 1455 aa21.27■■□□□ 1
PABPC4-203ENST00000372858 VWDEQ8N2E2 1590 aa21.26■□□□□ 0.99
PABPC4-203ENST00000372858 NEURL4Q96JN8 1562 aa21.26■□□□□ 0.99
PABPC4-203ENST00000372858 POLR3AO14802 1390 aaPredicted RBP21.25■□□□□ 0.99
PABPC4-203ENST00000372858 UGGT1Q9NYU2 1555 aa21.25■□□□□ 0.99
PABPC4-203ENST00000372858 ABCA6Q8N139 1617 aa21.24■□□□□ 0.99
PABPC4-203ENST00000372858 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
PABPC4-203ENST00000372858 CHGAP10645 457 aaKnown RBP21.23■□□□□ 0.99
PABPC4-203ENST00000372858 INO80Q9ULG1 1556 aaPredicted RBP21.23■□□□□ 0.99
PABPC4-203ENST00000372858 KIF1BO60333 1816 aa21.22■□□□□ 0.99
PABPC4-203ENST00000372858 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
PABPC4-203ENST00000372858 SBNO2Q9Y2G9 1366 aa21.22■□□□□ 0.99
PABPC4-203ENST00000372858 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
PABPC4-203ENST00000372858 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
PABPC4-203ENST00000372858 ADGRL1O94910 1474 aa21.21■□□□□ 0.99
PABPC4-203ENST00000372858 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.98
PABPC4-203ENST00000372858 AAMPQ13685 434 aa21.2■□□□□ 0.98
PABPC4-203ENST00000372858 UPF2Q9HAU5 1272 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 387 ms