RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 IQGAP1P46940 1657 aa25.23■■□□□ 1.63
CD40-202ENST00000372285 TMEM131LA2VDJ0 1609 aa25.23■■□□□ 1.63
CD40-202ENST00000372285 IDI1Q13907 227 aa25.23■■□□□ 1.63
CD40-202ENST00000372285 MYO5BQ9ULV0 1848 aa25.23■■□□□ 1.63
CD40-202ENST00000372285 FBXO31Q5XUX0 539 aaPredicted RBP25.22■■□□□ 1.63
CD40-202ENST00000372285 ARID4BQ4LE39 1312 aaPredicted RBP25.21■■□□□ 1.63
CD40-202ENST00000372285 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.62
CD40-202ENST00000372285 ADGRF5Q8IZF2 1346 aa25.2■■□□□ 1.62
CD40-202ENST00000372285 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
CD40-202ENST00000372285 ST20-MTHFSA0A0A6YYL1 179 aa25.19■■□□□ 1.62
CD40-202ENST00000372285 ESF1Q9H501 851 aaKnown RBP25.19■■□□□ 1.62
CD40-202ENST00000372285 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
CD40-202ENST00000372285 PIK3C2GO75747 1445 aa25.14■■□□□ 1.62
CD40-202ENST00000372285 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
CD40-202ENST00000372285 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
CD40-202ENST00000372285 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
CD40-202ENST00000372285 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
CD40-202ENST00000372285 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
CD40-202ENST00000372285 FER1L4A9Z1Z3 1794 aa25.09■■□□□ 1.61
CD40-202ENST00000372285 TESK2Q96S53 571 aa25.07■■□□□ 1.6
CD40-202ENST00000372285 C14orf93Q9H972 538 aaKnown RBP25.06■■□□□ 1.6
CD40-202ENST00000372285 ANP32CO43423 234 aa25.06■■□□□ 1.6
CD40-202ENST00000372285 A2ML1A8K2U0 1454 aa25.05■■□□□ 1.6
CD40-202ENST00000372285 KDM5AP29375 1690 aaKnown RBP25.05■■□□□ 1.6
CD40-202ENST00000372285 EIF3AQ14152 1382 aaKnown RBP25.04■■□□□ 1.6
CD40-202ENST00000372285 ADGRB1O14514 1584 aa25.03■■□□□ 1.6
CD40-202ENST00000372285 C3P01024 1663 aa25.03■■□□□ 1.6
CD40-202ENST00000372285 TNRQ92752 1358 aa25.03■■□□□ 1.6
CD40-202ENST00000372285 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
CD40-202ENST00000372285 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
CD40-202ENST00000372285 NUTM2DQ5VT03 806 aaPredicted RBP24.98■■□□□ 1.59
CD40-202ENST00000372285 DISP3Q9P2K9 1392 aa24.98■■□□□ 1.59
CD40-202ENST00000372285 TMF1P82094 1093 aa24.97■■□□□ 1.59
CD40-202ENST00000372285 UBR1Q8IWV7 1749 aa24.96■■□□□ 1.59
CD40-202ENST00000372285 CCER2I3L3R5 266 aa24.96■■□□□ 1.59
CD40-202ENST00000372285 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
CD40-202ENST00000372285 RIMS2Q9UQ26 1411 aa24.95■■□□□ 1.58
CD40-202ENST00000372285 NLRP1Q9C000 1473 aa24.94■■□□□ 1.58
CD40-202ENST00000372285 SLC24A1O60721 1099 aa24.92■■□□□ 1.58
CD40-202ENST00000372285 SBNO2Q9Y2G9 1366 aa24.91■■□□□ 1.58
CD40-202ENST00000372285 ASXL1Q8IXJ9 1541 aa24.9■■□□□ 1.58
CD40-202ENST00000372285 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
CD40-202ENST00000372285 ARHGEF28Q8N1W1 1705 aaKnown RBP24.9■■□□□ 1.58
CD40-202ENST00000372285 CEBPAP49715 358 aaPredicted RBP24.89■■□□□ 1.57
CD40-202ENST00000372285 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.57
CD40-202ENST00000372285 QRICH2Q9H0J4 1663 aa24.88■■□□□ 1.57
CD40-202ENST00000372285 ADAMTSL3P82987 1691 aa24.88■■□□□ 1.57
CD40-202ENST00000372285 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.88■■□□□ 1.57
CD40-202ENST00000372285 CDCA8Q53HL2 280 aa24.87■■□□□ 1.57
CD40-202ENST00000372285 RIMS1Q86UR5 1692 aaKnown RBP24.87■■□□□ 1.57
CD40-202ENST00000372285 SETD1AO15047 1707 aaKnown RBP24.86■■□□□ 1.57
CD40-202ENST00000372285 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
CD40-202ENST00000372285 PRKRIP1Q9H875 184 aaPredicted RBP24.86■■□□□ 1.57
CD40-202ENST00000372285 TRAK1Q9UPV9 953 aa24.85■■□□□ 1.57
CD40-202ENST00000372285 NRXN3Q9Y4C0 1643 aa24.83■■□□□ 1.57
CD40-202ENST00000372285 TMEM2Q9UHN6 1383 aa24.83■■□□□ 1.57
CD40-202ENST00000372285 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
CD40-202ENST00000372285 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
CD40-202ENST00000372285 MYOM1P52179 1685 aa24.81■■□□□ 1.56
CD40-202ENST00000372285 PTPRMP28827 1452 aa24.8■■□□□ 1.56
CD40-202ENST00000372285 YTHDC2Q9H6S0 1430 aaKnown RBP24.79■■□□□ 1.56
CD40-202ENST00000372285 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
CD40-202ENST00000372285 SLIT1O75093 1534 aa24.76■■□□□ 1.55
CD40-202ENST00000372285 ARHGAP23Q9P227 1491 aa24.75■■□□□ 1.55
CD40-202ENST00000372285 PER1O15534 1290 aaPredicted RBP24.75■■□□□ 1.55
CD40-202ENST00000372285 KTN1Q86UP2 1357 aaKnown RBP24.74■■□□□ 1.55
CD40-202ENST00000372285 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
CD40-202ENST00000372285 PANK3Q9H999 370 aa24.73■■□□□ 1.55
CD40-202ENST00000372285 DLC1Q96QB1 1528 aa24.73■■□□□ 1.55
CD40-202ENST00000372285 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
CD40-202ENST00000372285 STK26Q9P289 416 aa24.71■■□□□ 1.55
CD40-202ENST00000372285 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
CD40-202ENST00000372285 PLEKHG1Q9ULL1 1385 aa24.7■■□□□ 1.54
CD40-202ENST00000372285 CEP170BQ9Y4F5 1589 aaPredicted RBP24.7■■□□□ 1.54
CD40-202ENST00000372285 SETD1BQ9UPS6 1966 aaKnown RBP24.7■■□□□ 1.54
CD40-202ENST00000372285 PUS7Q96PZ0 661 aaKnown RBP24.69■■□□□ 1.54
CD40-202ENST00000372285 KNDC1Q76NI1 1749 aa24.69■■□□□ 1.54
CD40-202ENST00000372285 ZNF142P52746 1687 aaPredicted RBP24.69■■□□□ 1.54
CD40-202ENST00000372285 TULP4Q9NRJ4 1543 aa24.69■■□□□ 1.54
CD40-202ENST00000372285 THEMISQ8N1K5 641 aaPredicted RBP24.69■■□□□ 1.54
CD40-202ENST00000372285 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
CD40-202ENST00000372285 LTKP29376 864 aa24.67■■□□□ 1.54
CD40-202ENST00000372285 RALBP1Q15311 655 aa24.66■■□□□ 1.54
CD40-202ENST00000372285 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
CD40-202ENST00000372285 ADAMTS13Q76LX8 1427 aa24.65■■□□□ 1.54
CD40-202ENST00000372285 EVC2Q86UK5 1308 aa24.65■■□□□ 1.54
CD40-202ENST00000372285 TXNDC2Q86VQ3 553 aa24.65■■□□□ 1.54
CD40-202ENST00000372285 METP08581 1390 aa24.65■■□□□ 1.54
CD40-202ENST00000372285 MED14O60244 1454 aa24.64■■□□□ 1.53
CD40-202ENST00000372285 PRAM1Q96QH2 718 aa24.64■■□□□ 1.53
CD40-202ENST00000372285 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
CD40-202ENST00000372285 CCDC184Q52MB2 194 aa24.63■■□□□ 1.53
CD40-202ENST00000372285 TECPR2O15040 1411 aa24.62■■□□□ 1.53
CD40-202ENST00000372285 POGKQ9P215 609 aa24.62■■□□□ 1.53
CD40-202ENST00000372285 CPS1P31327 1500 aa24.6■■□□□ 1.53
CD40-202ENST00000372285 SIRT1Q96EB6 747 aa24.6■■□□□ 1.53
CD40-202ENST00000372285 BCANQ96GW7 911 aa24.59■■□□□ 1.53
CD40-202ENST00000372285 MRS2Q9HD23 443 aa24.59■■□□□ 1.53
CD40-202ENST00000372285 MYBBP1AQ9BQG0 1328 aaKnown RBP24.59■■□□□ 1.53
CD40-202ENST00000372285 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms