RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 WASHC2AQ641Q2 1341 aa36.79■■■■□ 3.48
ATPAF1-202ENST00000371937 ADGRF5Q8IZF2 1346 aa36.79■■■■□ 3.48
ATPAF1-202ENST00000371937 TMEM131LA2VDJ0 1609 aa36.78■■■■□ 3.48
ATPAF1-202ENST00000371937 VGFO15240 615 aaPredicted RBP36.74■■■■□ 3.47
ATPAF1-202ENST00000371937 CCDC7Q96M83 1385 aa36.74■■■■□ 3.47
ATPAF1-202ENST00000371937 ST20-MTHFSA0A0A6YYL1 179 aa36.73■■■■□ 3.47
ATPAF1-202ENST00000371937 MIER1Q8N108 512 aa36.73■■■■□ 3.47
ATPAF1-202ENST00000371937 NEXMIFQ5QGS0 1516 aa36.73■■■■□ 3.47
ATPAF1-202ENST00000371937 POLR1AO95602 1720 aaPredicted RBP36.72■■■■□ 3.47
ATPAF1-202ENST00000371937 C11orf95C9JLR9 678 aaPredicted RBP36.71■■■■□ 3.47
ATPAF1-202ENST00000371937 STAG3Q9UJ98 1225 aa36.71■■■■□ 3.47
ATPAF1-202ENST00000371937 PIK3C2GO75747 1445 aa36.69■■■■□ 3.46
ATPAF1-202ENST00000371937 ZFYVE9O95405 1425 aa36.69■■■■□ 3.46
ATPAF1-202ENST00000371937 MYO5BQ9ULV0 1848 aa36.67■■■■□ 3.46
ATPAF1-202ENST00000371937 TNRQ92752 1358 aa36.67■■■■□ 3.46
ATPAF1-202ENST00000371937 KIF7Q2M1P5 1343 aa36.67■■■■□ 3.46
ATPAF1-202ENST00000371937 CFAP70Q5T0N1 1121 aa36.66■■■■□ 3.46
ATPAF1-202ENST00000371937 FER1L4A9Z1Z3 1794 aa36.66■■■■□ 3.46
ATPAF1-202ENST00000371937 SCAF11Q99590 1463 aaKnown RBP36.64■■■■□ 3.46
ATPAF1-202ENST00000371937 IQGAP1P46940 1657 aa36.62■■■■□ 3.45
ATPAF1-202ENST00000371937 C14orf93Q9H972 538 aaKnown RBP36.62■■■■□ 3.45
ATPAF1-202ENST00000371937 A2ML1A8K2U0 1454 aa36.61■■■■□ 3.45
ATPAF1-202ENST00000371937 SETBP1Q9Y6X0 1596 aa36.6■■■■□ 3.45
ATPAF1-202ENST00000371937 EIF3AQ14152 1382 aaKnown RBP36.58■■■■□ 3.45
ATPAF1-202ENST00000371937 C3P01024 1663 aa36.56■■■■□ 3.44
ATPAF1-202ENST00000371937 NUTM2DQ5VT03 806 aaPredicted RBP36.56■■■■□ 3.44
ATPAF1-202ENST00000371937 KDM5AP29375 1690 aaKnown RBP36.53■■■■□ 3.44
ATPAF1-202ENST00000371937 NLRP1Q9C000 1473 aa36.52■■■■□ 3.44
ATPAF1-202ENST00000371937 CEBPAP49715 358 aaPredicted RBP36.52■■■■□ 3.44
ATPAF1-202ENST00000371937 TESK2Q96S53 571 aa36.52■■■■□ 3.44
ATPAF1-202ENST00000371937 RIMS2Q9UQ26 1411 aa36.48■■■■□ 3.43
ATPAF1-202ENST00000371937 ADGRB1O14514 1584 aa36.47■■■■□ 3.43
ATPAF1-202ENST00000371937 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.46■■■■□ 3.43
ATPAF1-202ENST00000371937 ANP32CO43423 234 aa36.45■■■■□ 3.43
ATPAF1-202ENST00000371937 HDGFP51858 240 aaKnown RBP36.45■■■■□ 3.43
ATPAF1-202ENST00000371937 TMF1P82094 1093 aa36.45■■■■□ 3.43
ATPAF1-202ENST00000371937 POLR3GLQ9BT43 218 aa36.45■■■■□ 3.43
ATPAF1-202ENST00000371937 SLC24A1O60721 1099 aa36.44■■■■□ 3.42
ATPAF1-202ENST00000371937 UBR1Q8IWV7 1749 aa36.42■■■■□ 3.42
ATPAF1-202ENST00000371937 ADAMTSL3P82987 1691 aa36.4■■■■□ 3.42
ATPAF1-202ENST00000371937 TMEM132EQ6IEE7 984 aa36.38■■■■□ 3.42
ATPAF1-202ENST00000371937 RIMS1Q86UR5 1692 aaKnown RBP36.37■■■■□ 3.41
ATPAF1-202ENST00000371937 DISP3Q9P2K9 1392 aa36.37■■■■□ 3.41
ATPAF1-202ENST00000371937 PLPPR3Q6T4P5 718 aa36.36■■■■□ 3.41
ATPAF1-202ENST00000371937 TMEM2Q9UHN6 1383 aa36.36■■■■□ 3.41
ATPAF1-202ENST00000371937 MYO3AQ8NEV4 1616 aa36.35■■■■□ 3.41
ATPAF1-202ENST00000371937 CDCA8Q53HL2 280 aa36.34■■■■□ 3.41
ATPAF1-202ENST00000371937 TRAK1Q9UPV9 953 aa36.33■■■■□ 3.41
ATPAF1-202ENST00000371937 ALKQ9UM73 1620 aa36.32■■■■□ 3.4
ATPAF1-202ENST00000371937 SBNO2Q9Y2G9 1366 aa36.31■■■■□ 3.4
ATPAF1-202ENST00000371937 CENPJQ9HC77 1338 aaPredicted RBP36.3■■■■□ 3.4
ATPAF1-202ENST00000371937 ASXL1Q8IXJ9 1541 aa36.26■■■■□ 3.4
ATPAF1-202ENST00000371937 THEMISQ8N1K5 641 aaPredicted RBP36.24■■■■□ 3.39
ATPAF1-202ENST00000371937 SENP3Q9H4L4 574 aaPredicted RBP36.24■■■■□ 3.39
ATPAF1-202ENST00000371937 CCER2I3L3R5 266 aa36.22■■■■□ 3.39
ATPAF1-202ENST00000371937 YTHDC2Q9H6S0 1430 aaKnown RBP36.21■■■■□ 3.39
ATPAF1-202ENST00000371937 ARHGEF28Q8N1W1 1705 aaKnown RBP36.2■■■■□ 3.39
ATPAF1-202ENST00000371937 SLIT1O75093 1534 aa36.2■■■■□ 3.39
ATPAF1-202ENST00000371937 EID1Q9Y6B2 187 aa36.2■■■■□ 3.38
ATPAF1-202ENST00000371937 ARHGAP23Q9P227 1491 aa36.18■■■■□ 3.38
ATPAF1-202ENST00000371937 QRICH2Q9H0J4 1663 aa36.18■■■■□ 3.38
ATPAF1-202ENST00000371937 NRXN3Q9Y4C0 1643 aa36.17■■■■□ 3.38
ATPAF1-202ENST00000371937 SETD1AO15047 1707 aaKnown RBP36.16■■■■□ 3.38
ATPAF1-202ENST00000371937 PTPRMP28827 1452 aa36.16■■■■□ 3.38
ATPAF1-202ENST00000371937 STK26Q9P289 416 aa36.16■■■■□ 3.38
ATPAF1-202ENST00000371937 TXNDC2Q86VQ3 553 aa36.15■■■■□ 3.38
ATPAF1-202ENST00000371937 CEP170BQ9Y4F5 1589 aaPredicted RBP36.14■■■■□ 3.38
ATPAF1-202ENST00000371937 PLEKHG1Q9ULL1 1385 aa36.14■■■■□ 3.38
ATPAF1-202ENST00000371937 PRKRIP1Q9H875 184 aaPredicted RBP36.13■■■■□ 3.37
ATPAF1-202ENST00000371937 LTKP29376 864 aa36.13■■■■□ 3.37
ATPAF1-202ENST00000371937 BCANQ96GW7 911 aa36.13■■■■□ 3.37
ATPAF1-202ENST00000371937 LRPPRCP42704 1394 aaKnown RBP36.11■■■■□ 3.37
ATPAF1-202ENST00000371937 SETD1BQ9UPS6 1966 aaKnown RBP36.11■■■■□ 3.37
ATPAF1-202ENST00000371937 DLC1Q96QB1 1528 aa36.07■■■■□ 3.37
ATPAF1-202ENST00000371937 ABCC11Q96J66 1382 aa36.06■■■■□ 3.36
ATPAF1-202ENST00000371937 ZNF142P52746 1687 aaPredicted RBP36.05■■■■□ 3.36
ATPAF1-202ENST00000371937 PANK3Q9H999 370 aa36.05■■■■□ 3.36
ATPAF1-202ENST00000371937 POGKQ9P215 609 aa36.05■■■■□ 3.36
ATPAF1-202ENST00000371937 METP08581 1390 aa36.04■■■■□ 3.36
ATPAF1-202ENST00000371937 EVC2Q86UK5 1308 aa36.04■■■■□ 3.36
ATPAF1-202ENST00000371937 PUS7Q96PZ0 661 aaKnown RBP36.04■■■■□ 3.36
ATPAF1-202ENST00000371937 PRAM1Q96QH2 718 aa36.04■■■■□ 3.36
ATPAF1-202ENST00000371937 ADAMTS13Q76LX8 1427 aa36.03■■■■□ 3.36
ATPAF1-202ENST00000371937 PER1O15534 1290 aaPredicted RBP36.01■■■■□ 3.36
ATPAF1-202ENST00000371937 YTHDC1Q96MU7 727 aaKnown RBP36■■■■□ 3.35
ATPAF1-202ENST00000371937 KTN1Q86UP2 1357 aaKnown RBP35.99■■■■□ 3.35
ATPAF1-202ENST00000371937 MYOM1P52179 1685 aa35.98■■■■□ 3.35
ATPAF1-202ENST00000371937 SAFB2Q14151 953 aaKnown RBP eCLIP35.97■■■■□ 3.35
ATPAF1-202ENST00000371937 MED14O60244 1454 aa35.97■■■■□ 3.35
ATPAF1-202ENST00000371937 SIRT1Q96EB6 747 aa35.97■■■■□ 3.35
ATPAF1-202ENST00000371937 TECPR2O15040 1411 aa35.95■■■■□ 3.35
ATPAF1-202ENST00000371937 TULP4Q9NRJ4 1543 aa35.95■■■■□ 3.34
ATPAF1-202ENST00000371937 KNDC1Q76NI1 1749 aa35.94■■■■□ 3.34
ATPAF1-202ENST00000371937 TBX22Q9Y458 520 aa35.93■■■■□ 3.34
ATPAF1-202ENST00000371937 RALBP1Q15311 655 aa35.92■■■■□ 3.34
ATPAF1-202ENST00000371937 DIP2AQ14689 1571 aa35.91■■■■□ 3.34
ATPAF1-202ENST00000371937 FAM135BQ49AJ0 1406 aa35.91■■■■□ 3.34
ATPAF1-202ENST00000371937 ANKLE2Q86XL3 938 aa35.9■■■■□ 3.34
ATPAF1-202ENST00000371937 MINK1Q8N4C8 1332 aaPredicted RBP35.9■■■■□ 3.34
ATPAF1-202ENST00000371937 SLC26A8Q96RN1 970 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms