RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
SSBP3-203ENST00000371319 MLECQ14165 292 aa24.43■■□□□ 1.5
SSBP3-203ENST00000371319 SLC52A1Q9NWF4 448 aa24.43■■□□□ 1.5
SSBP3-203ENST00000371319 RPGRIP1LQ68CZ1 1315 aa24.43■■□□□ 1.5
SSBP3-203ENST00000371319 MYO5BQ9ULV0 1848 aa24.43■■□□□ 1.5
SSBP3-203ENST00000371319 NEXMIFQ5QGS0 1516 aa24.43■■□□□ 1.5
SSBP3-203ENST00000371319 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
SSBP3-203ENST00000371319 TMEM131LA2VDJ0 1609 aa24.42■■□□□ 1.5
SSBP3-203ENST00000371319 IDI1Q13907 227 aa24.42■■□□□ 1.5
SSBP3-203ENST00000371319 ANP32CO43423 234 aa24.41■■□□□ 1.5
SSBP3-203ENST00000371319 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
SSBP3-203ENST00000371319 SCAF11Q99590 1463 aaKnown RBP24.39■■□□□ 1.49
SSBP3-203ENST00000371319 PIK3C2GO75747 1445 aa24.37■■□□□ 1.49
SSBP3-203ENST00000371319 CFAP70Q5T0N1 1121 aa24.36■■□□□ 1.49
SSBP3-203ENST00000371319 TESK2Q96S53 571 aa24.36■■□□□ 1.49
SSBP3-203ENST00000371319 SETBP1Q9Y6X0 1596 aa24.35■■□□□ 1.49
SSBP3-203ENST00000371319 YTHDC1Q96MU7 727 aaKnown RBP24.33■■□□□ 1.48
SSBP3-203ENST00000371319 ZMYM3Q14202 1370 aa24.32■■□□□ 1.48
SSBP3-203ENST00000371319 CCER2I3L3R5 266 aa24.32■■□□□ 1.48
SSBP3-203ENST00000371319 ZFYVE9O95405 1425 aa24.31■■□□□ 1.48
SSBP3-203ENST00000371319 DISP3Q9P2K9 1392 aa24.3■■□□□ 1.48
SSBP3-203ENST00000371319 POLR3GLQ9BT43 218 aa24.29■■□□□ 1.48
SSBP3-203ENST00000371319 C14orf93Q9H972 538 aaKnown RBP24.29■■□□□ 1.48
SSBP3-203ENST00000371319 ADGRB1O14514 1584 aa24.29■■□□□ 1.48
SSBP3-203ENST00000371319 ESF1Q9H501 851 aaKnown RBP24.28■■□□□ 1.48
SSBP3-203ENST00000371319 MYO3AQ8NEV4 1616 aa24.27■■□□□ 1.48
SSBP3-203ENST00000371319 VGFO15240 615 aaPredicted RBP24.27■■□□□ 1.48
SSBP3-203ENST00000371319 EIF3AQ14152 1382 aaKnown RBP24.26■■□□□ 1.47
SSBP3-203ENST00000371319 A2ML1A8K2U0 1454 aa24.25■■□□□ 1.47
SSBP3-203ENST00000371319 NUTM2DQ5VT03 806 aaPredicted RBP24.24■■□□□ 1.47
SSBP3-203ENST00000371319 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
SSBP3-203ENST00000371319 TMF1P82094 1093 aa24.23■■□□□ 1.47
SSBP3-203ENST00000371319 FER1L4A9Z1Z3 1794 aa24.21■■□□□ 1.47
SSBP3-203ENST00000371319 PRKRIP1Q9H875 184 aaPredicted RBP24.2■■□□□ 1.47
SSBP3-203ENST00000371319 TNRQ92752 1358 aa24.19■■□□□ 1.46
SSBP3-203ENST00000371319 C3P01024 1663 aa24.17■■□□□ 1.46
SSBP3-203ENST00000371319 KDM5AP29375 1690 aaKnown RBP24.17■■□□□ 1.46
SSBP3-203ENST00000371319 ASXL1Q8IXJ9 1541 aa24.17■■□□□ 1.46
SSBP3-203ENST00000371319 STAG3Q9UJ98 1225 aa24.16■■□□□ 1.46
SSBP3-203ENST00000371319 ARHGEF28Q8N1W1 1705 aaKnown RBP24.15■■□□□ 1.46
SSBP3-203ENST00000371319 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
SSBP3-203ENST00000371319 TMEM132EQ6IEE7 984 aa24.15■■□□□ 1.46
SSBP3-203ENST00000371319 QRICH2Q9H0J4 1663 aa24.14■■□□□ 1.46
SSBP3-203ENST00000371319 UBR1Q8IWV7 1749 aa24.14■■□□□ 1.45
SSBP3-203ENST00000371319 SBNO2Q9Y2G9 1366 aa24.13■■□□□ 1.45
SSBP3-203ENST00000371319 MYOM1P52179 1685 aa24.12■■□□□ 1.45
SSBP3-203ENST00000371319 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
SSBP3-203ENST00000371319 TRAK1Q9UPV9 953 aa24.1■■□□□ 1.45
SSBP3-203ENST00000371319 CENPJQ9HC77 1338 aaPredicted RBP24.09■■□□□ 1.45
SSBP3-203ENST00000371319 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
SSBP3-203ENST00000371319 SETD1AO15047 1707 aaKnown RBP24.09■■□□□ 1.45
SSBP3-203ENST00000371319 SLC24A1O60721 1099 aa24.08■■□□□ 1.45
SSBP3-203ENST00000371319 NLRP1Q9C000 1473 aa24.07■■□□□ 1.44
SSBP3-203ENST00000371319 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-203ENST00000371319 NRXN3Q9Y4C0 1643 aa24.06■■□□□ 1.44
SSBP3-203ENST00000371319 PER1O15534 1290 aaPredicted RBP24.06■■□□□ 1.44
SSBP3-203ENST00000371319 CCDC184Q52MB2 194 aa24.06■■□□□ 1.44
SSBP3-203ENST00000371319 PTPRMP28827 1452 aa24.04■■□□□ 1.44
SSBP3-203ENST00000371319 PANK3Q9H999 370 aa24.04■■□□□ 1.44
SSBP3-203ENST00000371319 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
SSBP3-203ENST00000371319 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.02■■□□□ 1.44
SSBP3-203ENST00000371319 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
SSBP3-203ENST00000371319 KTN1Q86UP2 1357 aaKnown RBP24.01■■□□□ 1.43
SSBP3-203ENST00000371319 TMEM2Q9UHN6 1383 aa24.01■■□□□ 1.43
SSBP3-203ENST00000371319 RIMS1Q86UR5 1692 aaKnown RBP24■■□□□ 1.43
SSBP3-203ENST00000371319 ADAMTSL3P82987 1691 aa23.99■■□□□ 1.43
SSBP3-203ENST00000371319 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
SSBP3-203ENST00000371319 TULP4Q9NRJ4 1543 aa23.97■■□□□ 1.43
SSBP3-203ENST00000371319 RALBP1Q15311 655 aa23.97■■□□□ 1.43
SSBP3-203ENST00000371319 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
SSBP3-203ENST00000371319 MRS2Q9HD23 443 aa23.96■■□□□ 1.43
SSBP3-203ENST00000371319 STK26Q9P289 416 aa23.95■■□□□ 1.43
SSBP3-203ENST00000371319 DLC1Q96QB1 1528 aa23.95■■□□□ 1.42
SSBP3-203ENST00000371319 HDGFP51858 240 aaKnown RBP23.95■■□□□ 1.42
SSBP3-203ENST00000371319 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
SSBP3-203ENST00000371319 SLIT1O75093 1534 aa23.93■■□□□ 1.42
SSBP3-203ENST00000371319 ARHGAP23Q9P227 1491 aa23.92■■□□□ 1.42
SSBP3-203ENST00000371319 MYBBP1AQ9BQG0 1328 aaKnown RBP23.91■■□□□ 1.42
SSBP3-203ENST00000371319 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
SSBP3-203ENST00000371319 KNDC1Q76NI1 1749 aa23.9■■□□□ 1.42
SSBP3-203ENST00000371319 PUS7Q96PZ0 661 aaKnown RBP23.9■■□□□ 1.42
SSBP3-203ENST00000371319 METP08581 1390 aa23.89■■□□□ 1.41
SSBP3-203ENST00000371319 EVC2Q86UK5 1308 aa23.88■■□□□ 1.41
SSBP3-203ENST00000371319 PRAM1Q96QH2 718 aa23.88■■□□□ 1.41
SSBP3-203ENST00000371319 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
SSBP3-203ENST00000371319 ABCC11Q96J66 1382 aa23.87■■□□□ 1.41
SSBP3-203ENST00000371319 ADAMTS13Q76LX8 1427 aa23.87■■□□□ 1.41
SSBP3-203ENST00000371319 LTKP29376 864 aa23.86■■□□□ 1.41
SSBP3-203ENST00000371319 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
SSBP3-203ENST00000371319 KNSTRNQ9Y448 316 aa23.86■■□□□ 1.41
SSBP3-203ENST00000371319 BRD4O60885 1362 aaPredicted RBP23.86■■□□□ 1.41
SSBP3-203ENST00000371319 SAFB2Q14151 953 aaKnown RBP eCLIP23.86■■□□□ 1.41
SSBP3-203ENST00000371319 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
SSBP3-203ENST00000371319 CEP170BQ9Y4F5 1589 aaPredicted RBP23.85■■□□□ 1.41
SSBP3-203ENST00000371319 NPC1L1Q9UHC9 1359 aa23.85■■□□□ 1.41
SSBP3-203ENST00000371319 POGKQ9P215 609 aa23.84■■□□□ 1.41
SSBP3-203ENST00000371319 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.41
SSBP3-203ENST00000371319 MED14O60244 1454 aa23.83■■□□□ 1.4
SSBP3-203ENST00000371319 FAM9BQ8IZU0 186 aa23.82■■□□□ 1.4
SSBP3-203ENST00000371319 CPS1P31327 1500 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms