RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
RAB39B-201ENST00000369454 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
RAB39B-201ENST00000369454 SCAF11Q99590 1463 aaKnown RBP15.23■□□□□ 0.03
RAB39B-201ENST00000369454 C20orf194Q5TEA3 1177 aa15.22■□□□□ 0.03
RAB39B-201ENST00000369454 TRPM2O94759 1503 aa15.21■□□□□ 0.03
RAB39B-201ENST00000369454 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
RAB39B-201ENST00000369454 CRBNQ96SW2 442 aa15.21■□□□□ 0.03
RAB39B-201ENST00000369454 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
RAB39B-201ENST00000369454 PTPRTO14522 1441 aa15.2■□□□□ 0.02
RAB39B-201ENST00000369454 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
RAB39B-201ENST00000369454 EIF3AQ14152 1382 aaKnown RBP15.19■□□□□ 0.02
RAB39B-201ENST00000369454 APAF1O14727 1248 aa15.19■□□□□ 0.02
RAB39B-201ENST00000369454 NEUROD2Q15784 382 aa15.19■□□□□ 0.02
RAB39B-201ENST00000369454 SPHKAPQ2M3C7 1700 aa15.19■□□□□ 0.02
RAB39B-201ENST00000369454 CARD14Q9BXL6 1004 aa15.18■□□□□ 0.02
RAB39B-201ENST00000369454 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
RAB39B-201ENST00000369454 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
RAB39B-201ENST00000369454 NBR1Q14596 966 aa15.17■□□□□ 0.02
RAB39B-201ENST00000369454 SLC12A5Q9H2X9 1139 aa15.17■□□□□ 0.02
RAB39B-201ENST00000369454 LAMC1P11047 1609 aa15.17■□□□□ 0.02
RAB39B-201ENST00000369454 NOS1P29475 1434 aa15.17■□□□□ 0.02
RAB39B-201ENST00000369454 CD109Q6YHK3 1445 aa15.16■□□□□ 0.02
RAB39B-201ENST00000369454 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
RAB39B-201ENST00000369454 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
RAB39B-201ENST00000369454 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
RAB39B-201ENST00000369454 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
RAB39B-201ENST00000369454 TET3O43151 1660 aa15.14■□□□□ 0.01
RAB39B-201ENST00000369454 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
RAB39B-201ENST00000369454 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
RAB39B-201ENST00000369454 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
RAB39B-201ENST00000369454 STK26Q9P289 416 aa15.14■□□□□ 0.01
RAB39B-201ENST00000369454 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
RAB39B-201ENST00000369454 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
RAB39B-201ENST00000369454 CEP152O94986 1710 aa15.13■□□□□ 0.01
RAB39B-201ENST00000369454 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
RAB39B-201ENST00000369454 RRP7AQ9Y3A4 280 aaKnown RBP15.13■□□□□ 0.01
RAB39B-201ENST00000369454 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
RAB39B-201ENST00000369454 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
RAB39B-201ENST00000369454 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
RAB39B-201ENST00000369454 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
RAB39B-201ENST00000369454 MORC1Q86VD1 984 aa15.11■□□□□ 0.01
RAB39B-201ENST00000369454 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
RAB39B-201ENST00000369454 ZNF518AQ6AHZ1 1483 aa15.1■□□□□ 0.01
RAB39B-201ENST00000369454 DEPDC5O75140 1603 aa15.1■□□□□ 0.01
RAB39B-201ENST00000369454 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
RAB39B-201ENST00000369454 MROH1Q8NDA8 1641 aa15.09■□□□□ 0.01
RAB39B-201ENST00000369454 NPATQ14207 1427 aa15.09■□□□□ 0.01
RAB39B-201ENST00000369454 KIDINS220Q9ULH0 1771 aa15.09■□□□□ 0.01
RAB39B-201ENST00000369454 BCAR3O75815 825 aa15.09■□□□□ 0.01
RAB39B-201ENST00000369454 PDE4AP27815 886 aa15.08■□□□□ 0.01
RAB39B-201ENST00000369454 ZMYM4Q5VZL5 1548 aa15.08■□□□□ 0
RAB39B-201ENST00000369454 ABCA6Q8N139 1617 aa15.08■□□□□ 0
RAB39B-201ENST00000369454 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
RAB39B-201ENST00000369454 PPRC1Q5VV67 1664 aaKnown RBP15.07■□□□□ 0
RAB39B-201ENST00000369454 CABP2Q9NPB3 220 aa15.07■□□□□ 0
RAB39B-201ENST00000369454 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
RAB39B-201ENST00000369454 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
RAB39B-201ENST00000369454 VWDEQ8N2E2 1590 aa15.07■□□□□ 0
RAB39B-201ENST00000369454 SYNMO15061 1565 aa15.06■□□□□ 0
RAB39B-201ENST00000369454 MAP3K4Q9Y6R4 1608 aa15.06■□□□□ 0
RAB39B-201ENST00000369454 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
RAB39B-201ENST00000369454 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
RAB39B-201ENST00000369454 SLFN5Q08AF3 891 aa15.06■□□□□ 0
RAB39B-201ENST00000369454 TCERG1O14776 1098 aaKnown RBP15.05■□□□□ 0
RAB39B-201ENST00000369454 C14orf93Q9H972 538 aaKnown RBP15.05■□□□□ 0
RAB39B-201ENST00000369454 MROH2AA6NES4 1674 aa15.05■□□□□ -0
RAB39B-201ENST00000369454 KIF1BO60333 1816 aa15.05■□□□□ -0
RAB39B-201ENST00000369454 RGS3P49796 1198 aa15.04■□□□□ -0
RAB39B-201ENST00000369454 IDI1Q13907 227 aa15.04■□□□□ -0
RAB39B-201ENST00000369454 POGZQ7Z3K3 1410 aa15.04■□□□□ -0
RAB39B-201ENST00000369454 KDM5AP29375 1690 aaKnown RBP15.04■□□□□ -0
RAB39B-201ENST00000369454 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
RAB39B-201ENST00000369454 ZNF521Q96K83 1311 aa15.03■□□□□ -0
RAB39B-201ENST00000369454 PIK3C2GO75747 1445 aa15.03■□□□□ -0
RAB39B-201ENST00000369454 MTHFSP49914 203 aa15.03■□□□□ -0
RAB39B-201ENST00000369454 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
RAB39B-201ENST00000369454 MYOM1P52179 1685 aa15.03■□□□□ -0
RAB39B-201ENST00000369454 SRPK2P78362 688 aaKnown RBP15.02■□□□□ -0
RAB39B-201ENST00000369454 MYOM2P54296 1465 aa15.02■□□□□ -0
RAB39B-201ENST00000369454 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02□□□□□ -0.01
RAB39B-201ENST00000369454 BCL2L13Q9BXK5 485 aa15.02□□□□□ -0.01
RAB39B-201ENST00000369454 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
RAB39B-201ENST00000369454 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
RAB39B-201ENST00000369454 BACH2Q9BYV9 841 aa15.01□□□□□ -0.01
RAB39B-201ENST00000369454 MLECQ14165 292 aa15□□□□□ -0.01
RAB39B-201ENST00000369454 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
RAB39B-201ENST00000369454 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
RAB39B-201ENST00000369454 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
RAB39B-201ENST00000369454 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
RAB39B-201ENST00000369454 WWC1Q8IX03 1113 aa14.99□□□□□ -0.01
RAB39B-201ENST00000369454 FRMPD1Q5SYB0 1578 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 INSRP06213 1382 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 E9PSI1 815 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 U2AF1L5P0DN76 240 aaPredicted RBP14.98□□□□□ -0.01
RAB39B-201ENST00000369454 U2AF1Q01081 240 aaKnown RBP eCLIP14.98□□□□□ -0.01
RAB39B-201ENST00000369454 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 GGNBP2Q9H3C7 697 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 PANK1Q8TE04 598 aa14.98□□□□□ -0.01
RAB39B-201ENST00000369454 U2SURPO15042 1029 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms