RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SPINK5Q9NQ38 1064 aaPredicted RBP20.61■□□□□ 0.89
CHD1L-203ENST00000369259 ITSN2Q9NZM3 1697 aa20.61■□□□□ 0.89
CHD1L-203ENST00000369259 TROQ12816 1431 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-203ENST00000369259 NINLQ9Y2I6 1382 aa20.6■□□□□ 0.89
CHD1L-203ENST00000369259 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
CHD1L-203ENST00000369259 PDCL3Q9H2J4 239 aa20.6■□□□□ 0.89
CHD1L-203ENST00000369259 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-203ENST00000369259 E9PSI1 815 aa20.59■□□□□ 0.89
CHD1L-203ENST00000369259 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-203ENST00000369259 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
CHD1L-203ENST00000369259 PTPRGP23470 1445 aa20.58■□□□□ 0.89
CHD1L-203ENST00000369259 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.89
CHD1L-203ENST00000369259 TRIM44Q96DX7 344 aaPredicted RBP20.58■□□□□ 0.88
CHD1L-203ENST00000369259 LAMC1P11047 1609 aa20.57■□□□□ 0.88
CHD1L-203ENST00000369259 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
CHD1L-203ENST00000369259 DDX11L8A8MPP1 907 aa20.57■□□□□ 0.88
CHD1L-203ENST00000369259 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
CHD1L-203ENST00000369259 PMFBP1Q8TBY8 1022 aa20.56■□□□□ 0.88
CHD1L-203ENST00000369259 CCDC146Q8IYE0 955 aa20.54■□□□□ 0.88
CHD1L-203ENST00000369259 PANK1Q8TE04 598 aa20.54■□□□□ 0.88
CHD1L-203ENST00000369259 APAF1O14727 1248 aa20.53■□□□□ 0.88
CHD1L-203ENST00000369259 CANXP27824 592 aaKnown RBP20.53■□□□□ 0.88
CHD1L-203ENST00000369259 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
CHD1L-203ENST00000369259 SHANK2Q9UPX8 1470 aa20.53■□□□□ 0.88
CHD1L-203ENST00000369259 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
CHD1L-203ENST00000369259 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
CHD1L-203ENST00000369259 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
CHD1L-203ENST00000369259 CCDC144AA2RUR9 1427 aa20.52■□□□□ 0.88
CHD1L-203ENST00000369259 AAMPQ13685 434 aa20.52■□□□□ 0.88
CHD1L-203ENST00000369259 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
CHD1L-203ENST00000369259 PIK3C2GO75747 1445 aa20.52■□□□□ 0.88
CHD1L-203ENST00000369259 PDZRN3Q9UPQ7 1066 aa20.51■□□□□ 0.87
CHD1L-203ENST00000369259 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
CHD1L-203ENST00000369259 WDR7Q9Y4E6 1490 aa20.5■□□□□ 0.87
CHD1L-203ENST00000369259 ABCC10Q5T3U5 1492 aa20.49■□□□□ 0.87
CHD1L-203ENST00000369259 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
CHD1L-203ENST00000369259 A2MP01023 1474 aa20.48■□□□□ 0.87
CHD1L-203ENST00000369259 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
CHD1L-203ENST00000369259 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
CHD1L-203ENST00000369259 KIAA0556O60303 1618 aa20.48■□□□□ 0.87
CHD1L-203ENST00000369259 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
CHD1L-203ENST00000369259 PCDHB15Q9Y5E8 787 aa20.48■□□□□ 0.87
CHD1L-203ENST00000369259 KIAA1211Q6ZU35 1233 aa20.47■□□□□ 0.87
CHD1L-203ENST00000369259 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-203ENST00000369259 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
CHD1L-203ENST00000369259 TSPY4P0CV99 314 aa20.46■□□□□ 0.87
CHD1L-203ENST00000369259 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
CHD1L-203ENST00000369259 RTEL1-TNFRSF6BF6WH68 1400 aa20.46■□□□□ 0.87
CHD1L-203ENST00000369259 ADCY10Q96PN6 1610 aa20.45■□□□□ 0.86
CHD1L-203ENST00000369259 GAS2L3Q86XJ1 694 aa20.45■□□□□ 0.86
CHD1L-203ENST00000369259 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
CHD1L-203ENST00000369259 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
CHD1L-203ENST00000369259 PLXNC1O60486 1568 aa20.45■□□□□ 0.86
CHD1L-203ENST00000369259 FAM135AQ9P2D6 1515 aa20.44■□□□□ 0.86
CHD1L-203ENST00000369259 HSCBQ8IWL3 235 aa20.44■□□□□ 0.86
CHD1L-203ENST00000369259 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
CHD1L-203ENST00000369259 RWDD1Q9H446 243 aaPredicted RBP20.44■□□□□ 0.86
CHD1L-203ENST00000369259 EIF2AK4Q9P2K8 1649 aaKnown RBP20.44■□□□□ 0.86
CHD1L-203ENST00000369259 NUP160Q12769 1436 aa20.43■□□□□ 0.86
CHD1L-203ENST00000369259 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
CHD1L-203ENST00000369259 ASXL1Q8IXJ9 1541 aa20.42■□□□□ 0.86
CHD1L-203ENST00000369259 DDIT3P35638 169 aa20.42■□□□□ 0.86
CHD1L-203ENST00000369259 MFAP1P55081 439 aaKnown RBP20.42■□□□□ 0.86
CHD1L-203ENST00000369259 CDC42BPAQ5VT25 1732 aa20.42■□□□□ 0.86
CHD1L-203ENST00000369259 SKOR2Q2VWA4 1001 aaPredicted RBP20.41■□□□□ 0.86
CHD1L-203ENST00000369259 CCDC141Q6ZP82 1450 aa20.41■□□□□ 0.86
CHD1L-203ENST00000369259 CCDC173Q0VFZ6 552 aa20.41■□□□□ 0.86
CHD1L-203ENST00000369259 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
CHD1L-203ENST00000369259 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
CHD1L-203ENST00000369259 OFD1O75665 1012 aa20.4■□□□□ 0.86
CHD1L-203ENST00000369259 PRDM4Q9UKN5 801 aa20.39■□□□□ 0.86
CHD1L-203ENST00000369259 PLA2R1Q13018 1463 aa20.39■□□□□ 0.85
CHD1L-203ENST00000369259 TERF1P54274 439 aa20.39■□□□□ 0.85
CHD1L-203ENST00000369259 ZSCAN30Q86W11 494 aa20.39■□□□□ 0.85
CHD1L-203ENST00000369259 PPP1R9BQ96SB3 815 aa20.39■□□□□ 0.85
CHD1L-203ENST00000369259 PTMSP20962 102 aa20.38■□□□□ 0.85
CHD1L-203ENST00000369259 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
CHD1L-203ENST00000369259 TNPO1Q92973 898 aaKnown RBP20.38■□□□□ 0.85
CHD1L-203ENST00000369259 GBP4Q96PP9 640 aa20.38■□□□□ 0.85
CHD1L-203ENST00000369259 RLBP1P12271 317 aa20.38■□□□□ 0.85
CHD1L-203ENST00000369259 CDCA8Q53HL2 280 aa20.38■□□□□ 0.85
CHD1L-203ENST00000369259 WWC1Q8IX03 1113 aa20.38■□□□□ 0.85
CHD1L-203ENST00000369259 CIZ1Q9ULV3 898 aaPredicted RBP20.37■□□□□ 0.85
CHD1L-203ENST00000369259 SYNMO15061 1565 aa20.36■□□□□ 0.85
CHD1L-203ENST00000369259 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.36■□□□□ 0.85
CHD1L-203ENST00000369259 MAP7D2Q96T17 732 aa20.36■□□□□ 0.85
CHD1L-203ENST00000369259 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
CHD1L-203ENST00000369259 RIPK4P57078 832 aa20.35■□□□□ 0.85
CHD1L-203ENST00000369259 SCAPERQ9BY12 1400 aa20.35■□□□□ 0.85
CHD1L-203ENST00000369259 SMC5Q8IY18 1101 aa20.34■□□□□ 0.85
CHD1L-203ENST00000369259 SNX21Q969T3 373 aa20.34■□□□□ 0.85
CHD1L-203ENST00000369259 TNNQ9UQP3 1299 aa20.34■□□□□ 0.85
CHD1L-203ENST00000369259 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
CHD1L-203ENST00000369259 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.85
CHD1L-203ENST00000369259 MSNP26038 577 aaKnown RBP20.32■□□□□ 0.84
CHD1L-203ENST00000369259 NASPP49321 788 aaPredicted RBP20.32■□□□□ 0.84
CHD1L-203ENST00000369259 RBM10P98175 930 aaKnown RBP20.32■□□□□ 0.84
CHD1L-203ENST00000369259 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
CHD1L-203ENST00000369259 RNF17Q9BXT8 1623 aaKnown RBP20.32■□□□□ 0.84
CHD1L-203ENST00000369259 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.843e-7■■□□□ 12.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms