RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
SCNM1-202ENST00000368905 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
SCNM1-202ENST00000368905 CAMSAP2Q08AD1 1489 aa13.2□□□□□ -0.3
SCNM1-202ENST00000368905 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
SCNM1-202ENST00000368905 KIF14Q15058 1648 aa13.2□□□□□ -0.3
SCNM1-202ENST00000368905 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
SCNM1-202ENST00000368905 PTPRGP23470 1445 aa13.19□□□□□ -0.3
SCNM1-202ENST00000368905 IRF5Q13568 498 aa13.19□□□□□ -0.3
SCNM1-202ENST00000368905 SGSM3Q96HU1 749 aa13.18□□□□□ -0.3
SCNM1-202ENST00000368905 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
SCNM1-202ENST00000368905 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
SCNM1-202ENST00000368905 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
SCNM1-202ENST00000368905 ADGRL2O95490 1459 aa13.17□□□□□ -0.3
SCNM1-202ENST00000368905 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
SCNM1-202ENST00000368905 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
SCNM1-202ENST00000368905 KDM6BO15054 1643 aa13.16□□□□□ -0.3
SCNM1-202ENST00000368905 ATP10BO94823 1461 aa13.15□□□□□ -0.3
SCNM1-202ENST00000368905 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
SCNM1-202ENST00000368905 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
SCNM1-202ENST00000368905 MARCH6O60337 910 aa13.15□□□□□ -0.3
SCNM1-202ENST00000368905 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
SCNM1-202ENST00000368905 PHF14O94880 888 aa13.14□□□□□ -0.31
SCNM1-202ENST00000368905 SHANK2Q9UPX8 1470 aa13.14□□□□□ -0.31
SCNM1-202ENST00000368905 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
SCNM1-202ENST00000368905 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
SCNM1-202ENST00000368905 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
SCNM1-202ENST00000368905 ABCC10Q5T3U5 1492 aa13.13□□□□□ -0.31
SCNM1-202ENST00000368905 CDC42BPAQ5VT25 1732 aa13.12□□□□□ -0.31
SCNM1-202ENST00000368905 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
SCNM1-202ENST00000368905 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
SCNM1-202ENST00000368905 ANP32CO43423 234 aa13.12□□□□□ -0.31
SCNM1-202ENST00000368905 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
SCNM1-202ENST00000368905 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
SCNM1-202ENST00000368905 RPRD2Q5VT52 1461 aaKnown RBP13.11□□□□□ -0.31
SCNM1-202ENST00000368905 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
SCNM1-202ENST00000368905 CCER2I3L3R5 266 aa13.11□□□□□ -0.31
SCNM1-202ENST00000368905 TPD52L2O43399 206 aaKnown RBP13.11□□□□□ -0.31
SCNM1-202ENST00000368905 TRAK2O60296 914 aa13.11□□□□□ -0.31
SCNM1-202ENST00000368905 FOXD4L6Q3SYB3 417 aaPredicted RBP13.11□□□□□ -0.31
SCNM1-202ENST00000368905 FOXD4L3Q6VB84 417 aaPredicted RBP13.11□□□□□ -0.31
SCNM1-202ENST00000368905 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
SCNM1-202ENST00000368905 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
SCNM1-202ENST00000368905 PPME1Q9Y570 386 aa13.1□□□□□ -0.31
SCNM1-202ENST00000368905 UHRF1BP1LA0JNW5 1464 aa13.09□□□□□ -0.31
SCNM1-202ENST00000368905 TSPY4P0CV99 314 aa13.09□□□□□ -0.31
SCNM1-202ENST00000368905 TSPY10P0CW01 314 aa13.09□□□□□ -0.31
SCNM1-202ENST00000368905 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
SCNM1-202ENST00000368905 IGSF5Q9NSI5 407 aa13.09□□□□□ -0.31
SCNM1-202ENST00000368905 EIF4G2P78344 907 aaKnown RBP eCLIP13.08□□□□□ -0.31
SCNM1-202ENST00000368905 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
SCNM1-202ENST00000368905 CLGNO14967 610 aa13.07□□□□□ -0.32
SCNM1-202ENST00000368905 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
SCNM1-202ENST00000368905 ANKRD50Q9ULJ7 1429 aa13.07□□□□□ -0.32
SCNM1-202ENST00000368905 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
SCNM1-202ENST00000368905 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
SCNM1-202ENST00000368905 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
SCNM1-202ENST00000368905 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
SCNM1-202ENST00000368905 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
SCNM1-202ENST00000368905 PZPP20742 1482 aa13.06□□□□□ -0.32
SCNM1-202ENST00000368905 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
SCNM1-202ENST00000368905 UNCXA6NJT0 531 aa13.05□□□□□ -0.32
SCNM1-202ENST00000368905 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
SCNM1-202ENST00000368905 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
SCNM1-202ENST00000368905 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
SCNM1-202ENST00000368905 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCNM1-202ENST00000368905 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
SCNM1-202ENST00000368905 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
SCNM1-202ENST00000368905 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
SCNM1-202ENST00000368905 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
SCNM1-202ENST00000368905 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.32
SCNM1-202ENST00000368905 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
SCNM1-202ENST00000368905 FLIIQ13045 1269 aa13.02□□□□□ -0.33
SCNM1-202ENST00000368905 FOXD1Q16676 465 aa13.02□□□□□ -0.33
SCNM1-202ENST00000368905 PLEKHH2Q8IVE3 1493 aa13.02□□□□□ -0.33
SCNM1-202ENST00000368905 KDM5DQ9BY66 1539 aa13.01□□□□□ -0.33
SCNM1-202ENST00000368905 APBB1IPQ7Z5R6 666 aaPredicted RBP13.01□□□□□ -0.33
SCNM1-202ENST00000368905 KIF15Q9NS87 1388 aa13□□□□□ -0.33
SCNM1-202ENST00000368905 A6NJR5 290 aa13□□□□□ -0.33
SCNM1-202ENST00000368905 RALBP1Q15311 655 aa13□□□□□ -0.33
SCNM1-202ENST00000368905 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
SCNM1-202ENST00000368905 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
SCNM1-202ENST00000368905 NUP155O75694 1391 aa12.99□□□□□ -0.33
SCNM1-202ENST00000368905 NME8Q8N427 588 aa12.99□□□□□ -0.33
SCNM1-202ENST00000368905 GTF2E1P29083 439 aaPredicted RBP12.98□□□□□ -0.33
SCNM1-202ENST00000368905 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
SCNM1-202ENST00000368905 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
SCNM1-202ENST00000368905 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
SCNM1-202ENST00000368905 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
SCNM1-202ENST00000368905 ARHGAP5Q13017 1502 aa12.97□□□□□ -0.33
SCNM1-202ENST00000368905 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
SCNM1-202ENST00000368905 MYO5CQ9NQX4 1742 aa12.97□□□□□ -0.33
SCNM1-202ENST00000368905 HNRNPMP52272 730 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCNM1-202ENST00000368905 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
SCNM1-202ENST00000368905 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
SCNM1-202ENST00000368905 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
SCNM1-202ENST00000368905 ERCC3P19447 782 aa12.95□□□□□ -0.34
SCNM1-202ENST00000368905 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
SCNM1-202ENST00000368905 MICAL1Q8TDZ2 1067 aa12.95□□□□□ -0.34
SCNM1-202ENST00000368905 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
SCNM1-202ENST00000368905 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms