RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
SHC1-202ENST00000368445 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
SHC1-202ENST00000368445 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
SHC1-202ENST00000368445 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
SHC1-202ENST00000368445 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
SHC1-202ENST00000368445 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
SHC1-202ENST00000368445 NPATQ14207 1427 aa18.34■□□□□ 0.53
SHC1-202ENST00000368445 TRPM2O94759 1503 aa18.33■□□□□ 0.53
SHC1-202ENST00000368445 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.53
SHC1-202ENST00000368445 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
SHC1-202ENST00000368445 MORC1Q86VD1 984 aa18.33■□□□□ 0.52
SHC1-202ENST00000368445 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
SHC1-202ENST00000368445 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
SHC1-202ENST00000368445 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
SHC1-202ENST00000368445 CABP2Q9NPB3 220 aa18.31■□□□□ 0.52
SHC1-202ENST00000368445 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
SHC1-202ENST00000368445 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
SHC1-202ENST00000368445 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
SHC1-202ENST00000368445 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
SHC1-202ENST00000368445 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
SHC1-202ENST00000368445 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
SHC1-202ENST00000368445 KIDINS220Q9ULH0 1771 aa18.29■□□□□ 0.52
SHC1-202ENST00000368445 PLIN1O60240 522 aa18.28■□□□□ 0.52
SHC1-202ENST00000368445 TET3O43151 1660 aa18.28■□□□□ 0.52
SHC1-202ENST00000368445 MLH3Q9UHC1 1453 aa18.28■□□□□ 0.52
SHC1-202ENST00000368445 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
SHC1-202ENST00000368445 RBM19Q9Y4C8 960 aaKnown RBP18.27■□□□□ 0.52
SHC1-202ENST00000368445 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
SHC1-202ENST00000368445 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
SHC1-202ENST00000368445 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
SHC1-202ENST00000368445 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
SHC1-202ENST00000368445 NEO1Q92859 1461 aa18.24■□□□□ 0.51
SHC1-202ENST00000368445 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
SHC1-202ENST00000368445 APAF1O14727 1248 aa18.24■□□□□ 0.51
SHC1-202ENST00000368445 EVC2Q86UK5 1308 aa18.24■□□□□ 0.51
SHC1-202ENST00000368445 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
SHC1-202ENST00000368445 EFCAB6Q5THR3 1501 aa18.22■□□□□ 0.51
SHC1-202ENST00000368445 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
SHC1-202ENST00000368445 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
SHC1-202ENST00000368445 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
SHC1-202ENST00000368445 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
SHC1-202ENST00000368445 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
SHC1-202ENST00000368445 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
SHC1-202ENST00000368445 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
SHC1-202ENST00000368445 CEP152O94986 1710 aa18.2■□□□□ 0.5
SHC1-202ENST00000368445 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
SHC1-202ENST00000368445 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
SHC1-202ENST00000368445 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
SHC1-202ENST00000368445 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
SHC1-202ENST00000368445 PPRC1Q5VV67 1664 aaKnown RBP18.19■□□□□ 0.5
SHC1-202ENST00000368445 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
SHC1-202ENST00000368445 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
SHC1-202ENST00000368445 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
SHC1-202ENST00000368445 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
SHC1-202ENST00000368445 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 MTHFSP49914 203 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 NSD3Q9BZ95 1437 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 KIF1BO60333 1816 aa18.16■□□□□ 0.5
SHC1-202ENST00000368445 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
SHC1-202ENST00000368445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHC1-202ENST00000368445 ABCC3O15438 1527 aa18.15■□□□□ 0.5
SHC1-202ENST00000368445 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
SHC1-202ENST00000368445 VWDEQ8N2E2 1590 aa18.15■□□□□ 0.5
SHC1-202ENST00000368445 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
SHC1-202ENST00000368445 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHC1-202ENST00000368445 NUTM2FA1L443 756 aa18.14■□□□□ 0.5
SHC1-202ENST00000368445 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.5
SHC1-202ENST00000368445 ABCA6Q8N139 1617 aa18.14■□□□□ 0.49
SHC1-202ENST00000368445 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
SHC1-202ENST00000368445 ERVK-7P63135 1459 aa18.12■□□□□ 0.49
SHC1-202ENST00000368445 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
SHC1-202ENST00000368445 MAP3K4Q9Y6R4 1608 aa18.11■□□□□ 0.49
SHC1-202ENST00000368445 MYOM2P54296 1465 aa18.11■□□□□ 0.49
SHC1-202ENST00000368445 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
SHC1-202ENST00000368445 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
SHC1-202ENST00000368445 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
SHC1-202ENST00000368445 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
SHC1-202ENST00000368445 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
SHC1-202ENST00000368445 HDGFL2Q7Z4V5 671 aaPredicted RBP18.09■□□□□ 0.49
SHC1-202ENST00000368445 PIK3C2GO75747 1445 aa18.09■□□□□ 0.49
SHC1-202ENST00000368445 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.48
SHC1-202ENST00000368445 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.48
SHC1-202ENST00000368445 RIMBP3Q9UFD9 1639 aa18.08■□□□□ 0.48
SHC1-202ENST00000368445 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
SHC1-202ENST00000368445 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
SHC1-202ENST00000368445 LMTK2Q8IWU2 1503 aa18.07■□□□□ 0.48
SHC1-202ENST00000368445 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
SHC1-202ENST00000368445 LAMC1P11047 1609 aa18.06■□□□□ 0.48
SHC1-202ENST00000368445 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.06■□□□□ 0.48
SHC1-202ENST00000368445 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
SHC1-202ENST00000368445 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
SHC1-202ENST00000368445 FBLN1P23142 703 aa18.05■□□□□ 0.48
SHC1-202ENST00000368445 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
SHC1-202ENST00000368445 ADGRB3O60242 1522 aa18.04■□□□□ 0.48
SHC1-202ENST00000368445 SOX12O15370 315 aa18.04■□□□□ 0.48
SHC1-202ENST00000368445 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms