RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 DIEXFQ68CQ4 756 aaKnown RBP10.71□□□□□ -0.7
SSR2-202ENST00000368311 DISP1Q96F81 1524 aa10.71□□□□□ -0.7
SSR2-202ENST00000368311 PTPN23Q9H3S7 1636 aa10.71□□□□□ -0.7
SSR2-202ENST00000368311 CFAP43Q8NDM7 1665 aa10.7□□□□□ -0.7
SSR2-202ENST00000368311 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
SSR2-202ENST00000368311 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
SSR2-202ENST00000368311 NBPF14Q5TI25 921 aa10.7□□□□□ -0.7
SSR2-202ENST00000368311 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
SSR2-202ENST00000368311 CDCA7Q9BWT1 371 aaPredicted RBP10.7□□□□□ -0.7
SSR2-202ENST00000368311 ZMYM3Q14202 1370 aa10.7□□□□□ -0.7
SSR2-202ENST00000368311 NLRP1Q9C000 1473 aa10.69□□□□□ -0.7
SSR2-202ENST00000368311 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
SSR2-202ENST00000368311 SPG7Q9UQ90 795 aa10.69□□□□□ -0.7
SSR2-202ENST00000368311 GPATCH8Q9UKJ3 1502 aaKnown RBP10.69□□□□□ -0.7
SSR2-202ENST00000368311 TATP17735 454 aaPredicted RBP10.69□□□□□ -0.7
SSR2-202ENST00000368311 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
SSR2-202ENST00000368311 NUTM2BA6NNL0 878 aaPredicted RBP10.68□□□□□ -0.7
SSR2-202ENST00000368311 NUTM2EB1AL46 878 aaPredicted RBP10.68□□□□□ -0.7
SSR2-202ENST00000368311 NUTM2AQ8IVF1 878 aaPredicted RBP10.68□□□□□ -0.7
SSR2-202ENST00000368311 ATP7AQ04656 1500 aa10.68□□□□□ -0.7
SSR2-202ENST00000368311 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
SSR2-202ENST00000368311 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
SSR2-202ENST00000368311 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
SSR2-202ENST00000368311 NUTM2DQ5VT03 806 aaPredicted RBP10.67□□□□□ -0.7
SSR2-202ENST00000368311 PRDM11Q9NQV5 511 aa10.67□□□□□ -0.7
SSR2-202ENST00000368311 NCOA1Q15788 1441 aa10.67□□□□□ -0.7
SSR2-202ENST00000368311 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
SSR2-202ENST00000368311 MYO5CQ9NQX4 1742 aa10.67□□□□□ -0.7
SSR2-202ENST00000368311 ZNF772Q68DY9 489 aaPredicted RBP10.67□□□□□ -0.7
SSR2-202ENST00000368311 UPF2Q9HAU5 1272 aaKnown RBP10.67□□□□□ -0.7
SSR2-202ENST00000368311 SOX12O15370 315 aa10.66□□□□□ -0.7
SSR2-202ENST00000368311 C19orf44Q9H6X5 657 aa10.66□□□□□ -0.7
SSR2-202ENST00000368311 GLI2P10070 1586 aa10.66□□□□□ -0.7
SSR2-202ENST00000368311 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
SSR2-202ENST00000368311 TEFQ10587 303 aa10.66□□□□□ -0.7
SSR2-202ENST00000368311 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
SSR2-202ENST00000368311 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
SSR2-202ENST00000368311 PNISRQ8TF01 805 aaKnown RBP10.65□□□□□ -0.7
SSR2-202ENST00000368311 RIMS2Q9UQ26 1411 aa10.65□□□□□ -0.7
SSR2-202ENST00000368311 SYCP2Q9BX26 1530 aa10.65□□□□□ -0.7
SSR2-202ENST00000368311 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
SSR2-202ENST00000368311 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.71
SSR2-202ENST00000368311 KCNA6P17658 529 aa10.65□□□□□ -0.71
SSR2-202ENST00000368311 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
SSR2-202ENST00000368311 TBX22Q9Y458 520 aa10.64□□□□□ -0.71
SSR2-202ENST00000368311 NLRP6P59044 892 aa10.64□□□□□ -0.71
SSR2-202ENST00000368311 NPATQ14207 1427 aa10.64□□□□□ -0.71
SSR2-202ENST00000368311 YTHDC1Q96MU7 727 aaKnown RBP10.63□□□□□ -0.71
SSR2-202ENST00000368311 NLRP2Q9NX02 1062 aa10.63□□□□□ -0.71
SSR2-202ENST00000368311 DDX58O95786 925 aaKnown RBP10.63□□□□□ -0.71
SSR2-202ENST00000368311 AMOTL2Q9Y2J4 779 aa10.63□□□□□ -0.71
SSR2-202ENST00000368311 HECW2Q9P2P5 1572 aa10.62□□□□□ -0.71
SSR2-202ENST00000368311 TOM1L2Q6ZVM7 507 aa10.62□□□□□ -0.71
SSR2-202ENST00000368311 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
SSR2-202ENST00000368311 PHF8Q9UPP1 1060 aa10.62□□□□□ -0.71
SSR2-202ENST00000368311 KDM5DQ9BY66 1539 aa10.62□□□□□ -0.71
SSR2-202ENST00000368311 FTSJ3Q8IY81 847 aaKnown RBP10.62□□□□□ -0.71
SSR2-202ENST00000368311 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
SSR2-202ENST00000368311 OS9Q13438 667 aaPredicted RBP10.61□□□□□ -0.71
SSR2-202ENST00000368311 TAF7LQ5H9L4 462 aa10.61□□□□□ -0.71
SSR2-202ENST00000368311 ABCC5O15440 1437 aa10.61□□□□□ -0.71
SSR2-202ENST00000368311 TRPM2O94759 1503 aa10.61□□□□□ -0.71
SSR2-202ENST00000368311 ARHGEF5Q12774 1597 aa10.61□□□□□ -0.71
SSR2-202ENST00000368311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.61□□□□□ -0.71
SSR2-202ENST00000368311 SMC4Q9NTJ3 1288 aa10.6□□□□□ -0.71
SSR2-202ENST00000368311 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
SSR2-202ENST00000368311 LRRFIP1Q32MZ4 808 aaKnown RBP10.6□□□□□ -0.71
SSR2-202ENST00000368311 PIK3R4Q99570 1358 aa10.6□□□□□ -0.71
SSR2-202ENST00000368311 NEXNQ0ZGT2 675 aa10.59□□□□□ -0.71
SSR2-202ENST00000368311 SLC26A8Q96RN1 970 aa10.59□□□□□ -0.71
SSR2-202ENST00000368311 NOL10Q9BSC4 688 aaKnown RBP10.59□□□□□ -0.71
SSR2-202ENST00000368311 TTC21AQ8NDW8 1320 aa10.59□□□□□ -0.71
SSR2-202ENST00000368311 PRAM1Q96QH2 718 aa10.59□□□□□ -0.71
SSR2-202ENST00000368311 LAS1LQ9Y4W2 734 aaKnown RBP10.59□□□□□ -0.71
SSR2-202ENST00000368311 U2AF1L5P0DN76 240 aaPredicted RBP10.58□□□□□ -0.72
SSR2-202ENST00000368311 U2AF1Q01081 240 aaKnown RBP eCLIP10.58□□□□□ -0.72
SSR2-202ENST00000368311 GPATCH3Q96I76 525 aa10.58□□□□□ -0.72
SSR2-202ENST00000368311 TCOF1Q13428 1488 aaKnown RBP10.58□□□□□ -0.72
SSR2-202ENST00000368311 A0A087WZG4 1122 aa10.58□□□□□ -0.72
SSR2-202ENST00000368311 WDHD1O75717 1129 aaPredicted RBP10.58□□□□□ -0.72
SSR2-202ENST00000368311 L3MBTL2Q969R5 705 aa10.58□□□□□ -0.72
SSR2-202ENST00000368311 CCDC61Q9Y6R9 512 aa10.58□□□□□ -0.72
SSR2-202ENST00000368311 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
SSR2-202ENST00000368311 NPHP4O75161 1426 aaPredicted RBP10.57□□□□□ -0.72
SSR2-202ENST00000368311 POLD1P28340 1107 aa10.57□□□□□ -0.72
SSR2-202ENST00000368311 CEBPAP49715 358 aaPredicted RBP10.57□□□□□ -0.72
SSR2-202ENST00000368311 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
SSR2-202ENST00000368311 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
SSR2-202ENST00000368311 DDX10Q13206 875 aaKnown RBP10.56□□□□□ -0.72
SSR2-202ENST00000368311 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
SSR2-202ENST00000368311 DIAPH1O60610 1272 aaKnown RBP10.56□□□□□ -0.72
SSR2-202ENST00000368311 LTV1Q96GA3 475 aaPredicted RBP10.56□□□□□ -0.72
SSR2-202ENST00000368311 CC2D1BQ5T0F9 858 aaKnown RBP10.56□□□□□ -0.72
SSR2-202ENST00000368311 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
SSR2-202ENST00000368311 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
SSR2-202ENST00000368311 KIF6Q6ZMV9 814 aa10.55□□□□□ -0.72
SSR2-202ENST00000368311 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
SSR2-202ENST00000368311 KRT28Q7Z3Y7 464 aa10.55□□□□□ -0.72
SSR2-202ENST00000368311 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
SSR2-202ENST00000368311 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms