RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 NLRP13Q86W25 1043 aa18.81■□□□□ 0.6
SNHG28-201ENST00000368102 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
SNHG28-201ENST00000368102 WASHC2CQ9Y4E1 1318 aa18.8■□□□□ 0.6
SNHG28-201ENST00000368102 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
SNHG28-201ENST00000368102 CFAP74Q9C0B2 1584 aa18.8■□□□□ 0.6
SNHG28-201ENST00000368102 SCAF11Q99590 1463 aaKnown RBP18.79■□□□□ 0.6
SNHG28-201ENST00000368102 GGT6Q6P531 493 aa18.78■□□□□ 0.6
SNHG28-201ENST00000368102 CDCA7LQ96GN5 454 aa18.78■□□□□ 0.6
SNHG28-201ENST00000368102 LMTK2Q8IWU2 1503 aa18.78■□□□□ 0.6
SNHG28-201ENST00000368102 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
SNHG28-201ENST00000368102 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
SNHG28-201ENST00000368102 NEURL4Q96JN8 1562 aa18.78■□□□□ 0.6
SNHG28-201ENST00000368102 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
SNHG28-201ENST00000368102 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
SNHG28-201ENST00000368102 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
SNHG28-201ENST00000368102 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
SNHG28-201ENST00000368102 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.59
SNHG28-201ENST00000368102 FRMPD1Q5SYB0 1578 aa18.76■□□□□ 0.59
SNHG28-201ENST00000368102 CFAP70Q5T0N1 1121 aa18.76■□□□□ 0.59
SNHG28-201ENST00000368102 HECW2Q9P2P5 1572 aa18.75■□□□□ 0.59
SNHG28-201ENST00000368102 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
SNHG28-201ENST00000368102 MYOM2P54296 1465 aa18.73■□□□□ 0.59
SNHG28-201ENST00000368102 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
SNHG28-201ENST00000368102 NEO1Q92859 1461 aa18.73■□□□□ 0.59
SNHG28-201ENST00000368102 NPATQ14207 1427 aa18.72■□□□□ 0.59
SNHG28-201ENST00000368102 EIF3AQ14152 1382 aaKnown RBP18.72■□□□□ 0.59
SNHG28-201ENST00000368102 CHGAP10645 457 aaKnown RBP18.72■□□□□ 0.59
SNHG28-201ENST00000368102 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
SNHG28-201ENST00000368102 MAP3K4Q9Y6R4 1608 aa18.72■□□□□ 0.59
SNHG28-201ENST00000368102 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
SNHG28-201ENST00000368102 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
SNHG28-201ENST00000368102 ABCA6Q8N139 1617 aa18.7■□□□□ 0.58
SNHG28-201ENST00000368102 PLIN1O60240 522 aa18.7■□□□□ 0.58
SNHG28-201ENST00000368102 KIAA1210Q9ULL0 1709 aa18.7■□□□□ 0.58
SNHG28-201ENST00000368102 KIF1BO60333 1816 aa18.7■□□□□ 0.58
SNHG28-201ENST00000368102 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
SNHG28-201ENST00000368102 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
SNHG28-201ENST00000368102 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
SNHG28-201ENST00000368102 MROH2AA6NES4 1674 aa18.68■□□□□ 0.58
SNHG28-201ENST00000368102 SKAP1Q86WV1 359 aa18.67■□□□□ 0.58
SNHG28-201ENST00000368102 NOS1P29475 1434 aa18.67■□□□□ 0.58
SNHG28-201ENST00000368102 ADGRB3O60242 1522 aa18.67■□□□□ 0.58
SNHG28-201ENST00000368102 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
SNHG28-201ENST00000368102 NRXN1Q9ULB1 1477 aa18.66■□□□□ 0.58
SNHG28-201ENST00000368102 ABCC3O15438 1527 aa18.66■□□□□ 0.58
SNHG28-201ENST00000368102 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
SNHG28-201ENST00000368102 IFT172Q9UG01 1749 aa18.65■□□□□ 0.58
SNHG28-201ENST00000368102 ANP32AP39687 249 aaKnown RBP18.64■□□□□ 0.57
SNHG28-201ENST00000368102 SYNMO15061 1565 aa18.64■□□□□ 0.57
SNHG28-201ENST00000368102 SLC24A1O60721 1099 aa18.63■□□□□ 0.57
SNHG28-201ENST00000368102 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
SNHG28-201ENST00000368102 DIP2CQ9Y2E4 1556 aa18.62■□□□□ 0.57
SNHG28-201ENST00000368102 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
SNHG28-201ENST00000368102 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
SNHG28-201ENST00000368102 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
SNHG28-201ENST00000368102 ERVK-7P63135 1459 aa18.61■□□□□ 0.57
SNHG28-201ENST00000368102 C14orf93Q9H972 538 aaKnown RBP18.6■□□□□ 0.57
SNHG28-201ENST00000368102 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
SNHG28-201ENST00000368102 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
SNHG28-201ENST00000368102 INSRP06213 1382 aa18.59■□□□□ 0.57
SNHG28-201ENST00000368102 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
SNHG28-201ENST00000368102 PIK3C2GO75747 1445 aa18.59■□□□□ 0.57
SNHG28-201ENST00000368102 MYOM1P52179 1685 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 RICTORQ6R327 1708 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 BLMP54132 1417 aaPredicted RBP18.58■□□□□ 0.56
SNHG28-201ENST00000368102 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 NBR1Q14596 966 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 TRAK1Q9UPV9 953 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.56
SNHG28-201ENST00000368102 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
SNHG28-201ENST00000368102 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
SNHG28-201ENST00000368102 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
SNHG28-201ENST00000368102 ZMYM4Q5VZL5 1548 aa18.57■□□□□ 0.56
SNHG28-201ENST00000368102 SETBP1Q9Y6X0 1596 aa18.56■□□□□ 0.56
SNHG28-201ENST00000368102 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
SNHG28-201ENST00000368102 NPC1L1Q9UHC9 1359 aa18.56■□□□□ 0.56
SNHG28-201ENST00000368102 SBNO2Q9Y2G9 1366 aa18.56■□□□□ 0.56
SNHG28-201ENST00000368102 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
SNHG28-201ENST00000368102 ZBTB47Q9UFB7 747 aaPredicted RBP18.56■□□□□ 0.56
SNHG28-201ENST00000368102 PPLO60437 1756 aa18.55■□□□□ 0.56
SNHG28-201ENST00000368102 GLI2P10070 1586 aa18.55■□□□□ 0.56
SNHG28-201ENST00000368102 SIGLEC1Q9BZZ2 1709 aa18.55■□□□□ 0.56
SNHG28-201ENST00000368102 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
SNHG28-201ENST00000368102 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
SNHG28-201ENST00000368102 CRBNQ96SW2 442 aa18.54■□□□□ 0.56
SNHG28-201ENST00000368102 ARHGAP31Q2M1Z3 1444 aa18.54■□□□□ 0.56
SNHG28-201ENST00000368102 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
SNHG28-201ENST00000368102 CARD14Q9BXL6 1004 aa18.53■□□□□ 0.56
SNHG28-201ENST00000368102 MYO3AQ8NEV4 1616 aa18.53■□□□□ 0.56
SNHG28-201ENST00000368102 IDI1Q13907 227 aa18.53■□□□□ 0.56
SNHG28-201ENST00000368102 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
SNHG28-201ENST00000368102 ADGRB1O14514 1584 aa18.53■□□□□ 0.56
SNHG28-201ENST00000368102 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.56
SNHG28-201ENST00000368102 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.55
SNHG28-201ENST00000368102 PIK3C2BO00750 1634 aa18.51■□□□□ 0.55
SNHG28-201ENST00000368102 SLC52A1Q9NWF4 448 aa18.49■□□□□ 0.55
SNHG28-201ENST00000368102 NEXMIFQ5QGS0 1516 aa18.47■□□□□ 0.55
SNHG28-201ENST00000368102 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
SNHG28-201ENST00000368102 MLECQ14165 292 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms