RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 PTPRGP23470 1445 aa14.11□□□□□ -0.15
NECTIN4-201ENST00000368012 TMEM132EQ6IEE7 984 aa14.11□□□□□ -0.15
NECTIN4-201ENST00000368012 GGT6Q6P531 493 aa14.11□□□□□ -0.15
NECTIN4-201ENST00000368012 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
NECTIN4-201ENST00000368012 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
NECTIN4-201ENST00000368012 C8orf34Q49A92 452 aa14.1□□□□□ -0.15
NECTIN4-201ENST00000368012 SLFN5Q08AF3 891 aa14.1□□□□□ -0.15
NECTIN4-201ENST00000368012 NAP1L5Q96NT1 182 aaPredicted RBP14.1□□□□□ -0.15
NECTIN4-201ENST00000368012 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
NECTIN4-201ENST00000368012 ADGBQ8N7X0 1667 aa14.09□□□□□ -0.15
NECTIN4-201ENST00000368012 E9PSI1 815 aa14.08□□□□□ -0.15
NECTIN4-201ENST00000368012 ITPRIPQ8IWB1 547 aa14.08□□□□□ -0.15
NECTIN4-201ENST00000368012 SLC12A5Q9H2X9 1139 aa14.08□□□□□ -0.15
NECTIN4-201ENST00000368012 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
NECTIN4-201ENST00000368012 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
NECTIN4-201ENST00000368012 A2MP01023 1474 aa14.08□□□□□ -0.16
NECTIN4-201ENST00000368012 WASHC2CQ9Y4E1 1318 aa14.08□□□□□ -0.16
NECTIN4-201ENST00000368012 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
NECTIN4-201ENST00000368012 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
NECTIN4-201ENST00000368012 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
NECTIN4-201ENST00000368012 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
NECTIN4-201ENST00000368012 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 TPRNQ4KMQ1 711 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 SPAG9O60271 1321 aaKnown RBP14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 CCDC141Q6ZP82 1450 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 TCP11L2Q8N4U5 519 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 SMC4Q9NTJ3 1288 aa14.06□□□□□ -0.16
NECTIN4-201ENST00000368012 RSPH4AQ5TD94 716 aa14.05□□□□□ -0.16
NECTIN4-201ENST00000368012 COL17A1Q9UMD9 1497 aaPredicted RBP14.05□□□□□ -0.16
NECTIN4-201ENST00000368012 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
NECTIN4-201ENST00000368012 APBB1O00213 710 aa14.04□□□□□ -0.16
NECTIN4-201ENST00000368012 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
NECTIN4-201ENST00000368012 MTHFSP49914 203 aa14.04□□□□□ -0.16
NECTIN4-201ENST00000368012 KDM2BQ8NHM5 1336 aa14.04□□□□□ -0.16
NECTIN4-201ENST00000368012 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
NECTIN4-201ENST00000368012 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
NECTIN4-201ENST00000368012 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
NECTIN4-201ENST00000368012 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
NECTIN4-201ENST00000368012 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
NECTIN4-201ENST00000368012 ARHGAP5Q13017 1502 aa14.03□□□□□ -0.16
NECTIN4-201ENST00000368012 RWDD1Q9H446 243 aaPredicted RBP14.02□□□□□ -0.16
NECTIN4-201ENST00000368012 BLMP54132 1417 aaPredicted RBP14.02□□□□□ -0.17
NECTIN4-201ENST00000368012 CGNL1Q0VF96 1302 aa14.02□□□□□ -0.17
NECTIN4-201ENST00000368012 WWC1Q8IX03 1113 aa14.02□□□□□ -0.17
NECTIN4-201ENST00000368012 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
NECTIN4-201ENST00000368012 SYCP2Q9BX26 1530 aa14.01□□□□□ -0.17
NECTIN4-201ENST00000368012 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
NECTIN4-201ENST00000368012 ZBTB7CA1YPR0 619 aa14.01□□□□□ -0.17
NECTIN4-201ENST00000368012 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
NECTIN4-201ENST00000368012 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
NECTIN4-201ENST00000368012 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
NECTIN4-201ENST00000368012 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
NECTIN4-201ENST00000368012 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
NECTIN4-201ENST00000368012 PCDHB15Q9Y5E8 787 aa13.99□□□□□ -0.17
NECTIN4-201ENST00000368012 RLBP1P12271 317 aa13.99□□□□□ -0.17
NECTIN4-201ENST00000368012 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
NECTIN4-201ENST00000368012 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
NECTIN4-201ENST00000368012 GOLGA6L3A6NEY3 463 aa13.98□□□□□ -0.17
NECTIN4-201ENST00000368012 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
NECTIN4-201ENST00000368012 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
NECTIN4-201ENST00000368012 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
NECTIN4-201ENST00000368012 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
NECTIN4-201ENST00000368012 NUP160Q12769 1436 aa13.97□□□□□ -0.17
NECTIN4-201ENST00000368012 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
NECTIN4-201ENST00000368012 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
NECTIN4-201ENST00000368012 ADGRF5Q8IZF2 1346 aa13.96□□□□□ -0.17
NECTIN4-201ENST00000368012 ZMYM4Q5VZL5 1548 aa13.96□□□□□ -0.17
NECTIN4-201ENST00000368012 SOX12O15370 315 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 RRAGDQ9NQL2 400 aaPredicted RBP13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 ABCA8O94911 1581 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 ADCY10Q96PN6 1610 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 C22orf23Q9BZE7 217 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 C1orf115Q9H7X2 142 aa13.95□□□□□ -0.18
NECTIN4-201ENST00000368012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 ARID3AQ99856 593 aa13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 TBC1D2Q9BYX2 928 aa13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 ZNF521Q96K83 1311 aa13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 DZIP1LQ8IYY4 767 aaKnown RBP13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 L1TD1Q5T7N2 865 aaKnown RBP13.94□□□□□ -0.18
NECTIN4-201ENST00000368012 PANK2Q9BZ23 570 aa13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 RSPH6AQ9H0K4 717 aa13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 E9PCH4 1651 aa13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 FBLN1P23142 703 aa13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 WDR7Q9Y4E6 1490 aa13.93□□□□□ -0.18
NECTIN4-201ENST00000368012 KANK1Q14678 1352 aa13.92□□□□□ -0.18
NECTIN4-201ENST00000368012 ANKRD45Q5TZF3 282 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms