RNA–Protein interactions for RNA: ENST00000367928.4

VNN1-201, Transcript of vanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VNN1, Length 3,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN1-201ENST00000367928 CEP164Q9UPV0 1460 aa4.3□□□□□ -1.72
VNN1-201ENST00000367928 ESPNB1AK53 854 aa4.3□□□□□ -1.72
VNN1-201ENST00000367928 TCERG1O14776 1098 aaKnown RBP4.3□□□□□ -1.72
VNN1-201ENST00000367928 CBX1P83916 185 aa4.3□□□□□ -1.72
VNN1-201ENST00000367928 TMC1Q8TDI8 760 aa4.3□□□□□ -1.72
VNN1-201ENST00000367928 MFAP1P55081 439 aaKnown RBP4.3□□□□□ -1.72
VNN1-201ENST00000367928 XPCQ01831 940 aaPredicted RBP4.3□□□□□ -1.72
VNN1-201ENST00000367928 TRIM44Q96DX7 344 aaPredicted RBP4.3□□□□□ -1.72
VNN1-201ENST00000367928 MAPKBP1O60336 1514 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 SHROOM2Q13796 1616 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 SPDYE4A6NLX3 237 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 RRP1P56182 461 aaKnown RBP4.29□□□□□ -1.72
VNN1-201ENST00000367928 RIPK4P57078 832 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 NEUROD2Q15784 382 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 CTTNBP2Q8WZ74 1663 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 CLCN1P35523 988 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 CHIC2Q9UKJ5 165 aa4.29□□□□□ -1.72
VNN1-201ENST00000367928 AQRO60306 1485 aaKnown RBP eCLIP4.29□□□□□ -1.72
VNN1-201ENST00000367928 APBB1O00213 710 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 ARID3CA6NKF2 412 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 MYH16Q9H6N6 1097 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 CGNQ9P2M7 1197 aaKnown RBP4.28□□□□□ -1.72
VNN1-201ENST00000367928 KCNG1Q9UIX4 513 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 RCAN3Q9UKA8 241 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 CFAP43Q8NDM7 1665 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 ARAP1Q96P48 1450 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 PBRM1Q86U86 1689 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
VNN1-201ENST00000367928 CALD1Q05682 793 aaKnown RBP4.27□□□□□ -1.73
VNN1-201ENST00000367928 GAS2L3Q86XJ1 694 aa4.27□□□□□ -1.73
VNN1-201ENST00000367928 CCDC125Q86Z20 511 aa4.27□□□□□ -1.73
VNN1-201ENST00000367928 CHADLQ6NUI6 762 aa4.27□□□□□ -1.73
VNN1-201ENST00000367928 SCUBE2Q9NQ36 999 aa4.27□□□□□ -1.73
VNN1-201ENST00000367928 CUX2O14529 1486 aa4.27□□□□□ -1.73
VNN1-201ENST00000367928 EFCAB5A4FU69 1503 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 RRBP1Q9P2E9 1410 aaKnown RBP4.26□□□□□ -1.73
VNN1-201ENST00000367928 CCNB3Q8WWL7 1395 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 C8orf34Q49A92 452 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 CADPSQ9ULU8 1353 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 UQCRHLA0A096LP55 91 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 UQCRHP07919 91 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 PPP4R3BQ5MIZ7 849 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 NOL8Q76FK4 1167 aaKnown RBP4.26□□□□□ -1.73
VNN1-201ENST00000367928 APPP05067 770 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 MLECQ14165 292 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 L1TD1Q5T7N2 865 aaKnown RBP4.26□□□□□ -1.73
VNN1-201ENST00000367928 TMTC2Q8N394 836 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 CHAMP1Q96JM3 812 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 DNAJC5Q9H3Z4 198 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 RRP7BPQ9NSQ0 103 aa4.26□□□□□ -1.73
VNN1-201ENST00000367928 LOC102724159A0A0B4J2E5 919 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 TRAK2O60296 914 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 PWP2Q15269 919 aaKnown RBP4.25□□□□□ -1.73
VNN1-201ENST00000367928 C17orf53Q8N3J3 647 aaPredicted RBP4.25□□□□□ -1.73
VNN1-201ENST00000367928 GRPEL1Q9HAV7 217 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 TMEM51Q9NW97 253 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 ADAMTS12P58397 1594 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 ADCY10Q96PN6 1610 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 SPDYE1Q8NFV5 336 aaPredicted RBP4.25□□□□□ -1.73
VNN1-201ENST00000367928 ARHGEF11O15085 1522 aa4.25□□□□□ -1.73
VNN1-201ENST00000367928 CASC1Q6TDU7 716 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 CEP120Q8N960 986 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 PANK3Q9H999 370 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 EIF4G2P78344 907 aaKnown RBP eCLIP4.24□□□□□ -1.73
VNN1-201ENST00000367928 DNTTIP2Q5QJE6 756 aaKnown RBP4.24□□□□□ -1.73
VNN1-201ENST00000367928 SPTY2D1Q68D10 685 aaPredicted RBP4.24□□□□□ -1.73
VNN1-201ENST00000367928 MMP14P50281 582 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 FAM161AQ3B820 660 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 TRAIPQ9BWF2 469 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 RIPOR2Q9Y4F9 1068 aa4.24□□□□□ -1.73
VNN1-201ENST00000367928 TOPBP1Q92547 1522 aa4.23□□□□□ -1.73
VNN1-201ENST00000367928 TTC36A6NLP5 189 aa4.23□□□□□ -1.73
VNN1-201ENST00000367928 HMGB1P1B2RPK0 211 aaPredicted RBP4.23□□□□□ -1.73
VNN1-201ENST00000367928 IRX3P78415 501 aaPredicted RBP4.23□□□□□ -1.73
VNN1-201ENST00000367928 TMX1Q9H3N1 280 aa4.23□□□□□ -1.73
VNN1-201ENST00000367928 HDAC5Q9UQL6 1122 aa4.23□□□□□ -1.73
VNN1-201ENST00000367928 PKD2Q13563 968 aa4.23□□□□□ -1.73
VNN1-201ENST00000367928 RNF214Q8ND24 703 aa4.23□□□□□ -1.73
VNN1-201ENST00000367928 KIF7Q2M1P5 1343 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 URB2Q14146 1524 aaKnown RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 ERICH4A6NGS2 130 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 MCM4P33991 863 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 ATP2B3Q16720 1220 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 FOXD4L6Q3SYB3 417 aaPredicted RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 FOXD4L3Q6VB84 417 aaPredicted RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 EP400NLQ6ZTU2 488 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 L3MBTL2Q969R5 705 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 TBC1D2Q9BYX2 928 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 SMG6Q86US8 1419 aaKnown RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 UGGT2Q9NYU1 1516 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 ZSCAN20P17040 1043 aaPredicted RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 MSNP26038 577 aaKnown RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 CC2D1BQ5T0F9 858 aaKnown RBP4.22□□□□□ -1.73
VNN1-201ENST00000367928 GORABQ5T7V8 394 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 NBPF11Q86T75 865 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 NGEFQ8N5V2 710 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 SETD5Q9C0A6 1442 aa4.22□□□□□ -1.73
VNN1-201ENST00000367928 NBPF1Q3BBV0 1214 aa4.21□□□□□ -1.73
VNN1-201ENST00000367928 NBPF20Q3BBV1 942 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms