RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 SLC4A3P48751 1232 aa10.52□□□□□ -0.73
XCL1-201ENST00000367818 CDHR5Q9HBB8 845 aa10.52□□□□□ -0.73
XCL1-201ENST00000367818 GDF9O60383 454 aa10.51□□□□□ -0.73
XCL1-201ENST00000367818 AAASQ9NRG9 546 aa10.51□□□□□ -0.73
XCL1-201ENST00000367818 TLL1O43897 1013 aa10.5□□□□□ -0.73
XCL1-201ENST00000367818 STK17AQ9UEE5 414 aa10.5□□□□□ -0.73
XCL1-201ENST00000367818 BLOC1S3Q6QNY0 202 aa10.49□□□□□ -0.73
XCL1-201ENST00000367818 LIAT1Q6ZQX7 453 aa10.49□□□□□ -0.73
XCL1-201ENST00000367818 WFS1O76024 890 aa10.46□□□□□ -0.74
XCL1-201ENST00000367818 S1PR4O95977 384 aa10.46□□□□□ -0.74
XCL1-201ENST00000367818 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
XCL1-201ENST00000367818 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
XCL1-201ENST00000367818 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
XCL1-201ENST00000367818 PADI6Q6TGC4 694 aa10.44□□□□□ -0.74
XCL1-201ENST00000367818 CRIPAKQ8N1N5 446 aa10.42□□□□□ -0.74
XCL1-201ENST00000367818 WIPF1O43516 503 aa10.4□□□□□ -0.74
XCL1-201ENST00000367818 INSM1Q01101 510 aaPredicted RBP10.4□□□□□ -0.74
XCL1-201ENST00000367818 OSBPP22059 807 aa10.39□□□□□ -0.75
XCL1-201ENST00000367818 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
XCL1-201ENST00000367818 NFX1Q12986 1120 aaKnown RBP10.38□□□□□ -0.75
XCL1-201ENST00000367818 EYA1Q99502 592 aa10.38□□□□□ -0.75
XCL1-201ENST00000367818 ADH1BP00325 375 aa10.37□□□□□ -0.75
XCL1-201ENST00000367818 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
XCL1-201ENST00000367818 GMPR2Q9P2T1 348 aaKnown RBP10.37□□□□□ -0.75
XCL1-201ENST00000367818 PKD2L1Q9P0L9 805 aa10.36□□□□□ -0.75
XCL1-201ENST00000367818 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
XCL1-201ENST00000367818 C11orf95C9JLR9 678 aaPredicted RBP10.35□□□□□ -0.75
XCL1-201ENST00000367818 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
XCL1-201ENST00000367818 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
XCL1-201ENST00000367818 AVPP01185 164 aa10.34□□□□□ -0.75
XCL1-201ENST00000367818 KMT5BQ4FZB7 885 aa10.34□□□□□ -0.75
XCL1-201ENST00000367818 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
XCL1-201ENST00000367818 FOXC1Q12948 553 aa10.33□□□□□ -0.76
XCL1-201ENST00000367818 SLC6A16Q9GZN6 736 aa10.33□□□□□ -0.76
XCL1-201ENST00000367818 AXIN1O15169 862 aa10.32□□□□□ -0.76
XCL1-201ENST00000367818 DCAF8L2P0C7V8 631 aa10.31□□□□□ -0.76
XCL1-201ENST00000367818 DNAJB2P25686 324 aa10.3□□□□□ -0.76
XCL1-201ENST00000367818 E2F4Q16254 413 aa10.3□□□□□ -0.76
XCL1-201ENST00000367818 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
XCL1-201ENST00000367818 NR1I2O75469 434 aa10.29□□□□□ -0.76
XCL1-201ENST00000367818 CFHP08603 1231 aa10.29□□□□□ -0.76
XCL1-201ENST00000367818 LOC100996750A0A140TA64 210 aa10.28□□□□□ -0.76
XCL1-201ENST00000367818 KRTAP4-6Q9BYQ5 205 aa10.28□□□□□ -0.76
XCL1-201ENST00000367818 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
XCL1-201ENST00000367818 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
XCL1-201ENST00000367818 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
XCL1-201ENST00000367818 CYP4X1Q8N118 509 aa10.26□□□□□ -0.77
XCL1-201ENST00000367818 LCE2CQ5TA81 110 aa10.25□□□□□ -0.77
XCL1-201ENST00000367818 RPIAP49247 311 aa10.24□□□□□ -0.77
XCL1-201ENST00000367818 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
XCL1-201ENST00000367818 TERTO14746 1132 aaKnown RBP10.21□□□□□ -0.78
XCL1-201ENST00000367818 SPSB2Q99619 263 aa10.19□□□□□ -0.78
XCL1-201ENST00000367818 FAM181BA6NEQ2 426 aa10.18□□□□□ -0.78
XCL1-201ENST00000367818 SCUBE3Q8IX30 993 aa10.18□□□□□ -0.78
XCL1-201ENST00000367818 RCCD1A6NED2 376 aa10.17□□□□□ -0.78
XCL1-201ENST00000367818 CD2BP2O95400 341 aaKnown RBP10.17□□□□□ -0.78
XCL1-201ENST00000367818 SLC10A3P09131 477 aa10.17□□□□□ -0.78
XCL1-201ENST00000367818 ATP13A2Q9NQ11 1180 aa10.17□□□□□ -0.78
XCL1-201ENST00000367818 SNRPBP14678 240 aaKnown RBP10.16□□□□□ -0.78
XCL1-201ENST00000367818 FCF1Q9Y324 198 aaKnown RBP10.16□□□□□ -0.78
XCL1-201ENST00000367818 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
XCL1-201ENST00000367818 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
XCL1-201ENST00000367818 TTC24A2A3L6 582 aaPredicted RBP10.14□□□□□ -0.79
XCL1-201ENST00000367818 SENP2Q9HC62 589 aa10.14□□□□□ -0.79
XCL1-201ENST00000367818 WDR70Q9NW82 654 aa10.14□□□□□ -0.79
XCL1-201ENST00000367818 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
XCL1-201ENST00000367818 PTGDRQ13258 359 aa10.12□□□□□ -0.79
XCL1-201ENST00000367818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
XCL1-201ENST00000367818 SMPD1P17405 629 aa10.09□□□□□ -0.79
XCL1-201ENST00000367818 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
XCL1-201ENST00000367818 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
XCL1-201ENST00000367818 WNT7AO00755 349 aa10.06□□□□□ -0.8
XCL1-201ENST00000367818 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
XCL1-201ENST00000367818 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
XCL1-201ENST00000367818 ZSCAN1Q8NBB4 408 aa10.05□□□□□ -0.8
XCL1-201ENST00000367818 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
XCL1-201ENST00000367818 RSPH4AQ5TD94 716 aa10.04□□□□□ -0.8
XCL1-201ENST00000367818 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
XCL1-201ENST00000367818 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
XCL1-201ENST00000367818 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
XCL1-201ENST00000367818 MORN1Q5T089 497 aa10.02□□□□□ -0.8
XCL1-201ENST00000367818 FAM160A2Q8N612 972 aaPredicted RBP10.02□□□□□ -0.8
XCL1-201ENST00000367818 PRDM9Q9NQV7 894 aa10.02□□□□□ -0.8
XCL1-201ENST00000367818 GMPRP36959 345 aa10.01□□□□□ -0.81
XCL1-201ENST00000367818 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
XCL1-201ENST00000367818 FMNL1O95466 1100 aaPredicted RBP10.01□□□□□ -0.81
XCL1-201ENST00000367818 J3QL48 77 aa10□□□□□ -0.81
XCL1-201ENST00000367818 NXF1Q9UBU9 619 aaKnown RBP10□□□□□ -0.81
XCL1-201ENST00000367818 SUZ12Q15022 739 aaKnown RBP9.99□□□□□ -0.81
XCL1-201ENST00000367818 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
XCL1-201ENST00000367818 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
XCL1-201ENST00000367818 TRIM32Q13049 653 aa9.98□□□□□ -0.81
XCL1-201ENST00000367818 SPRYD3Q8NCJ5 442 aa9.98□□□□□ -0.81
XCL1-201ENST00000367818 HPS1Q92902 700 aa9.98□□□□□ -0.81
XCL1-201ENST00000367818 IRF7Q92985 503 aa9.98□□□□□ -0.81
XCL1-201ENST00000367818 FUT2Q10981 343 aa9.96□□□□□ -0.82
XCL1-201ENST00000367818 MSS51Q4VC12 460 aa9.96□□□□□ -0.82
XCL1-201ENST00000367818 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
XCL1-201ENST00000367818 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
XCL1-201ENST00000367818 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms