RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 CCDC73Q6ZRK6 1079 aa15.06■□□□□ 0
TPR-201ENST00000367478 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
TPR-201ENST00000367478 R3HCC1Q9Y3T6 440 aaKnown RBP15.06■□□□□ 0
TPR-201ENST00000367478 ERLIN2O94905 339 aa15.06■□□□□ 0
TPR-201ENST00000367478 HMGN5P82970 282 aaKnown RBP15.06■□□□□ 0
TPR-201ENST00000367478 HSP90AB2PQ58FF8 381 aa15.06■□□□□ 0
TPR-201ENST00000367478 FOXD4L5Q5VV16 416 aaPredicted RBP15.06■□□□□ 0
TPR-201ENST00000367478 FOXD4L4Q8WXT5 416 aaPredicted RBP15.06■□□□□ 0
TPR-201ENST00000367478 OFD1O75665 1012 aa15.05■□□□□ 0
TPR-201ENST00000367478 USP8P40818 1118 aa15.05■□□□□ -0
TPR-201ENST00000367478 ANKRD45Q5TZF3 282 aa15.05■□□□□ -0
TPR-201ENST00000367478 TSHZ2Q9NRE2 1034 aa15.05■□□□□ -0
TPR-201ENST00000367478 AAMPQ13685 434 aa15.04■□□□□ -0
TPR-201ENST00000367478 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
TPR-201ENST00000367478 TXLNBQ8N3L3 684 aa15.04■□□□□ -0
TPR-201ENST00000367478 BRMS1Q9HCU9 246 aa15.04■□□□□ -0
TPR-201ENST00000367478 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
TPR-201ENST00000367478 KIF7Q2M1P5 1343 aa15.04■□□□□ -0
TPR-201ENST00000367478 STK26Q9P289 416 aa15.04■□□□□ -0
TPR-201ENST00000367478 GOLGA6L10A6NI86 522 aa15.03■□□□□ -0
TPR-201ENST00000367478 XBP1P17861 261 aa15.03■□□□□ -0
TPR-201ENST00000367478 SMARCE1Q969G3 411 aa15.03■□□□□ -0
TPR-201ENST00000367478 E9PSI1 815 aa15.03■□□□□ -0
TPR-201ENST00000367478 AMPHP49418 695 aa15.02■□□□□ -0
TPR-201ENST00000367478 FBXO3Q9UK99 471 aa15.02■□□□□ -0
TPR-201ENST00000367478 LUC7LQ9NQ29 371 aaKnown RBP15.02■□□□□ -0
TPR-201ENST00000367478 ZKSCAN2Q63HK3 967 aa15.02□□□□□ -0.01
TPR-201ENST00000367478 PDE4AP27815 886 aa15.02□□□□□ -0.01
TPR-201ENST00000367478 FANCIQ9NVI1 1328 aa15.02□□□□□ -0.01
TPR-201ENST00000367478 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
TPR-201ENST00000367478 KIAA0754O94854 1291 aa15.01□□□□□ -0.01
TPR-201ENST00000367478 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
TPR-201ENST00000367478 SMC3Q9UQE7 1217 aa15□□□□□ -0.01
TPR-201ENST00000367478 UACAQ9BZF9 1416 aa15□□□□□ -0.01
TPR-201ENST00000367478 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
TPR-201ENST00000367478 CLUAP1Q96AJ1 413 aa15□□□□□ -0.01
TPR-201ENST00000367478 TAF3Q5VWG9 929 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 PKD2Q13563 968 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 INTS3Q68E01 1043 aaKnown RBP14.99□□□□□ -0.01
TPR-201ENST00000367478 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 RABEP1Q15276 862 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 CAVIN1Q6NZI2 390 aaKnown RBP14.99□□□□□ -0.01
TPR-201ENST00000367478 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.99□□□□□ -0.01
TPR-201ENST00000367478 MRE11P49959 708 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 ANO2Q9NQ90 1003 aa14.99□□□□□ -0.01
TPR-201ENST00000367478 ERCC6Q03468 1493 aa14.98□□□□□ -0.01
TPR-201ENST00000367478 NASPP49321 788 aaPredicted RBP14.98□□□□□ -0.01
TPR-201ENST00000367478 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
TPR-201ENST00000367478 EZRP15311 586 aaKnown RBP14.98□□□□□ -0.01
TPR-201ENST00000367478 MYBBP1AQ9BQG0 1328 aaKnown RBP14.98□□□□□ -0.01
TPR-201ENST00000367478 C9orf78Q9NZ63 289 aaPredicted RBP14.98□□□□□ -0.01
TPR-201ENST00000367478 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
TPR-201ENST00000367478 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
TPR-201ENST00000367478 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
TPR-201ENST00000367478 ZFYVE27Q5T4F4 411 aa14.97□□□□□ -0.01
TPR-201ENST00000367478 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
TPR-201ENST00000367478 FILIP1LQ4L180 1135 aa14.97□□□□□ -0.01
TPR-201ENST00000367478 SEPT7Q16181 437 aaKnown RBP14.97□□□□□ -0.01
TPR-201ENST00000367478 NFXL1Q6ZNB6 911 aa14.97□□□□□ -0.01
TPR-201ENST00000367478 ERC2O15083 957 aa14.97□□□□□ -0.01
TPR-201ENST00000367478 IFIT2P09913 472 aaKnown RBP14.97□□□□□ -0.01
TPR-201ENST00000367478 DDX58O95786 925 aaKnown RBP14.97□□□□□ -0.01
TPR-201ENST00000367478 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
TPR-201ENST00000367478 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
TPR-201ENST00000367478 PDCP20941 246 aa14.96□□□□□ -0.01
TPR-201ENST00000367478 EIF3JO75822 258 aaKnown RBP14.96□□□□□ -0.02
TPR-201ENST00000367478 MBD3O95983 291 aa14.96□□□□□ -0.02
TPR-201ENST00000367478 FOXD4L6Q3SYB3 417 aaPredicted RBP14.96□□□□□ -0.02
TPR-201ENST00000367478 FOXD4L3Q6VB84 417 aaPredicted RBP14.96□□□□□ -0.02
TPR-201ENST00000367478 NGDNQ8NEJ9 315 aaKnown RBP14.95□□□□□ -0.02
TPR-201ENST00000367478 DYDC1Q8WWB3 177 aa14.95□□□□□ -0.02
TPR-201ENST00000367478 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
TPR-201ENST00000367478 WWC2Q6AWC2 1192 aa14.95□□□□□ -0.02
TPR-201ENST00000367478 DHX16O60231 1041 aaKnown RBP14.95□□□□□ -0.02
TPR-201ENST00000367478 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
TPR-201ENST00000367478 ZBED9Q6R2W3 1325 aa14.95□□□□□ -0.02
TPR-201ENST00000367478 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
TPR-201ENST00000367478 PSMA5P28066 241 aa14.94□□□□□ -0.02
TPR-201ENST00000367478 AXDND1Q5T1B0 1012 aaPredicted RBP14.94□□□□□ -0.02
TPR-201ENST00000367478 SYCP1Q15431 976 aa14.94□□□□□ -0.02
TPR-201ENST00000367478 NEFHP12036 1026 aa14.94□□□□□ -0.02
TPR-201ENST00000367478 RALYLQ86SE5 291 aaKnown RBP14.94□□□□□ -0.02
TPR-201ENST00000367478 NUP155O75694 1391 aa14.94□□□□□ -0.02
TPR-201ENST00000367478 CCDC9Q9Y3X0 531 aaKnown RBP14.94□□□□□ -0.02
TPR-201ENST00000367478 TXLNAP40222 546 aa14.93□□□□□ -0.02
TPR-201ENST00000367478 MCM2P49736 904 aa14.93□□□□□ -0.02
TPR-201ENST00000367478 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
TPR-201ENST00000367478 ZNHIT6Q9NWK9 470 aaKnown RBP14.93□□□□□ -0.02
TPR-201ENST00000367478 SDF4Q9BRK5 362 aa14.93□□□□□ -0.02
TPR-201ENST00000367478 MAGEC2Q9UBF1 373 aaPredicted RBP14.93□□□□□ -0.02
TPR-201ENST00000367478 HSP90AB3PQ58FF7 597 aa14.92□□□□□ -0.02
TPR-201ENST00000367478 VPS37CA5D8V6 355 aaPredicted RBP14.92□□□□□ -0.02
TPR-201ENST00000367478 KINO60870 393 aaKnown RBP14.92□□□□□ -0.02
TPR-201ENST00000367478 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
TPR-201ENST00000367478 ERLIN1O75477 346 aa14.91□□□□□ -0.02
TPR-201ENST00000367478 API5Q9BZZ5 524 aaKnown RBP14.91□□□□□ -0.02
TPR-201ENST00000367478 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
TPR-201ENST00000367478 MPHOSPH9Q99550 1183 aa14.91□□□□□ -0.02
TPR-201ENST00000367478 DEF6Q9H4E7 631 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms