RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
PTPRC-204ENST00000367379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
PTPRC-204ENST00000367379 ZPR1O75312 459 aa13.15□□□□□ -0.3
PTPRC-204ENST00000367379 SMYD5Q6GMV2 418 aa13.15□□□□□ -0.3
PTPRC-204ENST00000367379 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
PTPRC-204ENST00000367379 PCDHB3Q9Y5E6 796 aa13.15□□□□□ -0.3
PTPRC-204ENST00000367379 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
PTPRC-204ENST00000367379 GPR37O15354 613 aa13.13□□□□□ -0.31
PTPRC-204ENST00000367379 OATP04181 439 aa13.13□□□□□ -0.31
PTPRC-204ENST00000367379 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
PTPRC-204ENST00000367379 BLOC1S3Q6QNY0 202 aa13.12□□□□□ -0.31
PTPRC-204ENST00000367379 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
PTPRC-204ENST00000367379 SLC10A3P09131 477 aa13.11□□□□□ -0.31
PTPRC-204ENST00000367379 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
PTPRC-204ENST00000367379 CFHP08603 1231 aa13.09□□□□□ -0.31
PTPRC-204ENST00000367379 HAP1P54257 671 aaPredicted RBP13.09□□□□□ -0.31
PTPRC-204ENST00000367379 LAPTM4AQ15012 233 aa13.09□□□□□ -0.31
PTPRC-204ENST00000367379 KMT5BQ4FZB7 885 aa13.09□□□□□ -0.31
PTPRC-204ENST00000367379 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
PTPRC-204ENST00000367379 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
PTPRC-204ENST00000367379 GNPATO15228 680 aa13.08□□□□□ -0.32
PTPRC-204ENST00000367379 FECHP22830 423 aa13.08□□□□□ -0.32
PTPRC-204ENST00000367379 GGCXP38435 758 aa13.08□□□□□ -0.32
PTPRC-204ENST00000367379 Q6ZNB5 142 aa13.05□□□□□ -0.32
PTPRC-204ENST00000367379 GFRA3O60609 400 aa13.03□□□□□ -0.32
PTPRC-204ENST00000367379 TLL1O43897 1013 aa13.02□□□□□ -0.33
PTPRC-204ENST00000367379 RNF223E7ERA6 249 aa13□□□□□ -0.33
PTPRC-204ENST00000367379 NRG2O14511 850 aaPredicted RBP12.98□□□□□ -0.33
PTPRC-204ENST00000367379 LCE2BO14633 110 aa12.98□□□□□ -0.33
PTPRC-204ENST00000367379 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
PTPRC-204ENST00000367379 NR1I2O75469 434 aa12.97□□□□□ -0.33
PTPRC-204ENST00000367379 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
PTPRC-204ENST00000367379 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
PTPRC-204ENST00000367379 ADH1BP00325 375 aa12.95□□□□□ -0.34
PTPRC-204ENST00000367379 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
PTPRC-204ENST00000367379 SCUBE3Q8IX30 993 aa12.94□□□□□ -0.34
PTPRC-204ENST00000367379 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
PTPRC-204ENST00000367379 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
PTPRC-204ENST00000367379 S1PR4O95977 384 aa12.93□□□□□ -0.34
PTPRC-204ENST00000367379 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
PTPRC-204ENST00000367379 NLRP7Q8WX94 980 aa12.92□□□□□ -0.34
PTPRC-204ENST00000367379 SLC19A1P41440 591 aa12.91□□□□□ -0.34
PTPRC-204ENST00000367379 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
PTPRC-204ENST00000367379 TRAF7Q6Q0C0 670 aa12.91□□□□□ -0.34
PTPRC-204ENST00000367379 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
PTPRC-204ENST00000367379 PDZRN3Q9UPQ7 1066 aa12.9□□□□□ -0.34
PTPRC-204ENST00000367379 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
PTPRC-204ENST00000367379 DDX11L8A8MPP1 907 aa12.88□□□□□ -0.35
PTPRC-204ENST00000367379 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
PTPRC-204ENST00000367379 SLC6A16Q9GZN6 736 aa12.88□□□□□ -0.35
PTPRC-204ENST00000367379 MORN1Q5T089 497 aa12.87□□□□□ -0.35
PTPRC-204ENST00000367379 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
PTPRC-204ENST00000367379 GCGRP47871 477 aa12.86□□□□□ -0.35
PTPRC-204ENST00000367379 LIAT1Q6ZQX7 453 aa12.86□□□□□ -0.35
PTPRC-204ENST00000367379 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
PTPRC-204ENST00000367379 FUT2Q10981 343 aa12.85□□□□□ -0.35
PTPRC-204ENST00000367379 SPSB2Q99619 263 aa12.85□□□□□ -0.35
PTPRC-204ENST00000367379 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
PTPRC-204ENST00000367379 THAP11Q96EK4 314 aa12.84□□□□□ -0.35
PTPRC-204ENST00000367379 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
PTPRC-204ENST00000367379 MAP2K5Q13163 448 aa12.83□□□□□ -0.36
PTPRC-204ENST00000367379 PLA2G2CQ5R387 149 aa12.82□□□□□ -0.36
PTPRC-204ENST00000367379 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
PTPRC-204ENST00000367379 PRR20EP86478 221 aa12.79□□□□□ -0.36
PTPRC-204ENST00000367379 PRR20CP86479 221 aa12.79□□□□□ -0.36
PTPRC-204ENST00000367379 PRR20DP86480 221 aa12.79□□□□□ -0.36
PTPRC-204ENST00000367379 PRR20BP86481 221 aa12.79□□□□□ -0.36
PTPRC-204ENST00000367379 PRR20AP86496 221 aa12.79□□□□□ -0.36
PTPRC-204ENST00000367379 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
PTPRC-204ENST00000367379 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
PTPRC-204ENST00000367379 IRF6O14896 467 aa12.78□□□□□ -0.36
PTPRC-204ENST00000367379 ZNF697Q5TEC3 545 aa12.77□□□□□ -0.37
PTPRC-204ENST00000367379 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
PTPRC-204ENST00000367379 FAM160A2Q8N612 972 aaPredicted RBP12.76□□□□□ -0.37
PTPRC-204ENST00000367379 GDF9O60383 454 aa12.75□□□□□ -0.37
PTPRC-204ENST00000367379 CD46P15529 392 aa12.75□□□□□ -0.37
PTPRC-204ENST00000367379 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
PTPRC-204ENST00000367379 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
PTPRC-204ENST00000367379 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
PTPRC-204ENST00000367379 DGAT1O75907 488 aa12.7□□□□□ -0.38
PTPRC-204ENST00000367379 RPIAP49247 311 aa12.7□□□□□ -0.38
PTPRC-204ENST00000367379 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
PTPRC-204ENST00000367379 RNF19BQ6ZMZ0 732 aa12.7□□□□□ -0.38
PTPRC-204ENST00000367379 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
PTPRC-204ENST00000367379 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
PTPRC-204ENST00000367379 PRDM9Q9NQV7 894 aa12.69□□□□□ -0.38
PTPRC-204ENST00000367379 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
PTPRC-204ENST00000367379 TNFRSF10AO00220 468 aa12.67□□□□□ -0.38
PTPRC-204ENST00000367379 PKDCCQ504Y2 493 aa12.67□□□□□ -0.38
PTPRC-204ENST00000367379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRC-204ENST00000367379 PKD2L1Q9P0L9 805 aa12.67□□□□□ -0.38
PTPRC-204ENST00000367379 KDM4AO75164 1064 aa12.66□□□□□ -0.38
PTPRC-204ENST00000367379 MYT1Q01538 1121 aa12.66□□□□□ -0.38
PTPRC-204ENST00000367379 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
PTPRC-204ENST00000367379 Q3C1V9 767 aa12.65□□□□□ -0.38
PTPRC-204ENST00000367379 USP46P62068 366 aa12.62□□□□□ -0.39
PTPRC-204ENST00000367379 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
PTPRC-204ENST00000367379 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
PTPRC-204ENST00000367379 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
PTPRC-204ENST00000367379 MMP16P51512 607 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms