RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 ZNF777Q9ULD5 760 aaPredicted RBP4.9□□□□□ -1.62
PTPRC-203ENST00000367367 ZFYVE16Q7Z3T8 1539 aa4.9□□□□□ -1.62
PTPRC-203ENST00000367367 IRX5P78411 483 aaPredicted RBP4.9□□□□□ -1.63
PTPRC-203ENST00000367367 EFCAB2Q5VUJ9 269 aa4.9□□□□□ -1.63
PTPRC-203ENST00000367367 ZNF518AQ6AHZ1 1483 aa4.9□□□□□ -1.63
PTPRC-203ENST00000367367 YEATS2Q9ULM3 1422 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 TRAPPC8Q9Y2L5 1435 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 CROCC2H7BZ55 1655 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 ADGBQ8N7X0 1667 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 CAMSAP2Q08AD1 1489 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 TMEM106CQ9BVX2 250 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 PCDHB13Q9Y5F0 798 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 INO80Q9ULG1 1556 aaPredicted RBP4.89□□□□□ -1.63
PTPRC-203ENST00000367367 DIP2CQ9Y2E4 1556 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 BCORL1Q5H9F3 1711 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 FER1L4A9Z1Z3 1794 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 CFDP1Q9UEE9 299 aaPredicted RBP4.89□□□□□ -1.63
PTPRC-203ENST00000367367 ZNF644Q9H582 1327 aaPredicted RBP4.89□□□□□ -1.63
PTPRC-203ENST00000367367 PTPN23Q9H3S7 1636 aa4.89□□□□□ -1.63
PTPRC-203ENST00000367367 AFAP1Q8N556 730 aa4.88□□□□□ -1.63
PTPRC-203ENST00000367367 MYOM3Q5VTT5 1437 aa4.88□□□□□ -1.63
PTPRC-203ENST00000367367 ATP7AQ04656 1500 aa4.88□□□□□ -1.63
PTPRC-203ENST00000367367 MADDQ8WXG6 1647 aa4.88□□□□□ -1.63
PTPRC-203ENST00000367367 RIMS1Q86UR5 1692 aaKnown RBP4.88□□□□□ -1.63
PTPRC-203ENST00000367367 RASEFQ8IZ41 740 aa4.87□□□□□ -1.63
PTPRC-203ENST00000367367 HS6ST3Q8IZP7 471 aa4.87□□□□□ -1.63
PTPRC-203ENST00000367367 PLEKHH2Q8IVE3 1493 aa4.87□□□□□ -1.63
PTPRC-203ENST00000367367 ARHGEF5Q12774 1597 aa4.87□□□□□ -1.63
PTPRC-203ENST00000367367 ADAMTSL3P82987 1691 aa4.87□□□□□ -1.63
PTPRC-203ENST00000367367 HNRNPMP52272 730 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPRC-203ENST00000367367 PPARGC1BQ86YN6 1023 aaKnown RBP4.86□□□□□ -1.63
PTPRC-203ENST00000367367 OCEL1Q9H607 264 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 C1orf115Q9H7X2 142 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 MAGI2Q86UL8 1455 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 MBD5Q9P267 1494 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 CFAP65Q6ZU64 1925 aaKnown RBP4.86□□□□□ -1.63
PTPRC-203ENST00000367367 DNMT1P26358 1616 aaKnown RBP4.86□□□□□ -1.63
PTPRC-203ENST00000367367 CCDC141Q6ZP82 1450 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPRC-203ENST00000367367 MLH3Q9UHC1 1453 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 KIAA1107Q9UPP5 1409 aa4.86□□□□□ -1.63
PTPRC-203ENST00000367367 C9orf84Q5VXU9 1444 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 FGD6Q6ZV73 1430 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 KDM4FA0A1W2PPD8 638 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 PLXNC1O60486 1568 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 REREQ9P2R6 1566 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 ATP10AO60312 1499 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 MIA2Q96PC5 1412 aa4.85□□□□□ -1.63
PTPRC-203ENST00000367367 ARID4BQ4LE39 1312 aaPredicted RBP4.85□□□□□ -1.63
PTPRC-203ENST00000367367 CIZ1Q9ULV3 898 aaPredicted RBP4.85□□□□□ -1.63
PTPRC-203ENST00000367367 C3orf67Q6ZVT6 689 aa4.84□□□□□ -1.63
PTPRC-203ENST00000367367 IFNL1Q8IU54 200 aa4.84□□□□□ -1.63
PTPRC-203ENST00000367367 CLTCQ00610 1675 aaKnown RBP4.84□□□□□ -1.64
PTPRC-203ENST00000367367 SPAG9O60271 1321 aaKnown RBP4.84□□□□□ -1.64
PTPRC-203ENST00000367367 CADPS2Q86UW7 1296 aa4.84□□□□□ -1.64
PTPRC-203ENST00000367367 KCNV2Q8TDN2 545 aa4.84□□□□□ -1.64
PTPRC-203ENST00000367367 SGIP1Q9BQI5 828 aa4.84□□□□□ -1.64
PTPRC-203ENST00000367367 MAST1Q9Y2H9 1570 aa4.84□□□□□ -1.64
PTPRC-203ENST00000367367 TCOF1Q13428 1488 aaKnown RBP4.83□□□□□ -1.64
PTPRC-203ENST00000367367 C3P01024 1663 aa4.83□□□□□ -1.64
PTPRC-203ENST00000367367 MLECQ14165 292 aa4.83□□□□□ -1.64
PTPRC-203ENST00000367367 LMOD2Q6P5Q4 547 aa4.83□□□□□ -1.64
PTPRC-203ENST00000367367 CEP152O94986 1710 aa4.83□□□□□ -1.64
PTPRC-203ENST00000367367 SETD1BQ9UPS6 1966 aaKnown RBP4.82□□□□□ -1.64
PTPRC-203ENST00000367367 A2MP01023 1474 aa4.82□□□□□ -1.64
PTPRC-203ENST00000367367 ERICH6Q7L0X2 663 aa4.82□□□□□ -1.64
PTPRC-203ENST00000367367 DAPK1P53355 1430 aa4.82□□□□□ -1.64
PTPRC-203ENST00000367367 AGLP35573 1532 aa4.82□□□□□ -1.64
PTPRC-203ENST00000367367 PTPRMP28827 1452 aa4.82□□□□□ -1.64
PTPRC-203ENST00000367367 SHANK2Q9UPX8 1470 aa4.82□□□□□ -1.64
PTPRC-203ENST00000367367 FAM50AQ14320 339 aaKnown RBP4.81□□□□□ -1.64
PTPRC-203ENST00000367367 RTEL1-TNFRSF6BF6WH68 1400 aa4.81□□□□□ -1.64
PTPRC-203ENST00000367367 ABCC5O15440 1437 aa4.81□□□□□ -1.64
PTPRC-203ENST00000367367 MROH2AA6NES4 1674 aa4.81□□□□□ -1.64
PTPRC-203ENST00000367367 EIF2AK4Q9P2K8 1649 aaKnown RBP4.81□□□□□ -1.64
PTPRC-203ENST00000367367 ERBB3P21860 1342 aa4.81□□□□□ -1.64
PTPRC-203ENST00000367367 SLC24A3Q9HC58 644 aa4.81□□□□□ -1.64
PTPRC-203ENST00000367367 RNF17Q9BXT8 1623 aaKnown RBP4.81□□□□□ -1.64
PTPRC-203ENST00000367367 PTGER2P43116 358 aa4.8□□□□□ -1.64
PTPRC-203ENST00000367367 NPM2Q86SE8 214 aaKnown RBP4.8□□□□□ -1.64
PTPRC-203ENST00000367367 PLCD3Q8N3E9 789 aa4.8□□□□□ -1.64
PTPRC-203ENST00000367367 PLA2G2EQ9NZK7 142 aa4.8□□□□□ -1.64
PTPRC-203ENST00000367367 MROH1Q8NDA8 1641 aa4.8□□□□□ -1.64
PTPRC-203ENST00000367367 PREX1Q8TCU6 1659 aa4.8□□□□□ -1.64
PTPRC-203ENST00000367367 DEPDC5O75140 1603 aa4.8□□□□□ -1.64
PTPRC-203ENST00000367367 DUOX2Q9NRD8 1548 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 TSPY4P0CV99 314 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 TSPY10P0CW01 314 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 RSPH4AQ5TD94 716 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 CHIC2Q9UKJ5 165 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 ZC3H13Q5T200 1668 aaKnown RBP4.79□□□□□ -1.64
PTPRC-203ENST00000367367 PTPRKQ15262 1439 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 RRBP1Q9P2E9 1410 aaKnown RBP4.79□□□□□ -1.64
PTPRC-203ENST00000367367 GCC2Q8IWJ2 1684 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 KIF15Q9NS87 1388 aa4.79□□□□□ -1.64
PTPRC-203ENST00000367367 CAMSAP1Q5T5Y3 1602 aa4.78□□□□□ -1.64
PTPRC-203ENST00000367367 ADGRL2O95490 1459 aa4.78□□□□□ -1.64
PTPRC-203ENST00000367367 DHX29Q7Z478 1369 aaKnown RBP4.78□□□□□ -1.64
PTPRC-203ENST00000367367 ITGAEP38570 1179 aa4.78□□□□□ -1.64
PTPRC-203ENST00000367367 NEUROD2Q15784 382 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 265.1 ms