RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 PLCH2O75038 1416 aa16.85■□□□□ 0.29
CAPN8-201ENST00000366872 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
CAPN8-201ENST00000366872 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
CAPN8-201ENST00000366872 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
CAPN8-201ENST00000366872 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
CAPN8-201ENST00000366872 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.29
CAPN8-201ENST00000366872 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
CAPN8-201ENST00000366872 NGEFQ8N5V2 710 aa16.82■□□□□ 0.28
CAPN8-201ENST00000366872 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
CAPN8-201ENST00000366872 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
CAPN8-201ENST00000366872 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
CAPN8-201ENST00000366872 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
CAPN8-201ENST00000366872 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
CAPN8-201ENST00000366872 IFT172Q9UG01 1749 aa16.8■□□□□ 0.28
CAPN8-201ENST00000366872 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
CAPN8-201ENST00000366872 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
CAPN8-201ENST00000366872 AMER1Q5JTC6 1135 aaPredicted RBP16.78■□□□□ 0.28
CAPN8-201ENST00000366872 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
CAPN8-201ENST00000366872 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
CAPN8-201ENST00000366872 TRMT2AQ8IZ69 625 aaKnown RBP16.78■□□□□ 0.28
CAPN8-201ENST00000366872 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
CAPN8-201ENST00000366872 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
CAPN8-201ENST00000366872 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
CAPN8-201ENST00000366872 MYOM2P54296 1465 aa16.77■□□□□ 0.28
CAPN8-201ENST00000366872 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.27
CAPN8-201ENST00000366872 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
CAPN8-201ENST00000366872 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
CAPN8-201ENST00000366872 KNSTRNQ9Y448 316 aa16.76■□□□□ 0.27
CAPN8-201ENST00000366872 MAP3K4Q9Y6R4 1608 aa16.75■□□□□ 0.27
CAPN8-201ENST00000366872 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
CAPN8-201ENST00000366872 GOLGA2Q08379 1002 aa16.74■□□□□ 0.27
CAPN8-201ENST00000366872 KIF1BO60333 1816 aa16.74■□□□□ 0.27
CAPN8-201ENST00000366872 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
CAPN8-201ENST00000366872 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
CAPN8-201ENST00000366872 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
CAPN8-201ENST00000366872 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
CAPN8-201ENST00000366872 SLFN5Q08AF3 891 aa16.72■□□□□ 0.27
CAPN8-201ENST00000366872 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
CAPN8-201ENST00000366872 SALL2Q9Y467 1007 aaPredicted RBP16.71■□□□□ 0.27
CAPN8-201ENST00000366872 ABCA9Q8IUA7 1624 aa16.71■□□□□ 0.27
CAPN8-201ENST00000366872 PLIN1O60240 522 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 NEFMP07197 916 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
CAPN8-201ENST00000366872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
CAPN8-201ENST00000366872 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
CAPN8-201ENST00000366872 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
CAPN8-201ENST00000366872 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
CAPN8-201ENST00000366872 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
CAPN8-201ENST00000366872 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
CAPN8-201ENST00000366872 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
CAPN8-201ENST00000366872 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
CAPN8-201ENST00000366872 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
CAPN8-201ENST00000366872 AAMPQ13685 434 aa16.66■□□□□ 0.26
CAPN8-201ENST00000366872 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
CAPN8-201ENST00000366872 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
CAPN8-201ENST00000366872 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
CAPN8-201ENST00000366872 LMTK2Q8IWU2 1503 aa16.65■□□□□ 0.26
CAPN8-201ENST00000366872 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
CAPN8-201ENST00000366872 E9PSI1 815 aa16.65■□□□□ 0.26
CAPN8-201ENST00000366872 KANK1Q14678 1352 aa16.64■□□□□ 0.25
CAPN8-201ENST00000366872 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
CAPN8-201ENST00000366872 EFCAB6Q5THR3 1501 aa16.63■□□□□ 0.25
CAPN8-201ENST00000366872 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
CAPN8-201ENST00000366872 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
CAPN8-201ENST00000366872 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
CAPN8-201ENST00000366872 LAS1LQ9Y4W2 734 aaKnown RBP16.61■□□□□ 0.25
CAPN8-201ENST00000366872 MROH2AA6NES4 1674 aa16.6■□□□□ 0.25
CAPN8-201ENST00000366872 FANCAO15360 1455 aa16.6■□□□□ 0.25
CAPN8-201ENST00000366872 PPLO60437 1756 aa16.59■□□□□ 0.25
CAPN8-201ENST00000366872 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
CAPN8-201ENST00000366872 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.24
CAPN8-201ENST00000366872 GSE1Q14687 1217 aa16.58■□□□□ 0.24
CAPN8-201ENST00000366872 NFKBIBQ15653 356 aa16.58■□□□□ 0.24
CAPN8-201ENST00000366872 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
CAPN8-201ENST00000366872 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
CAPN8-201ENST00000366872 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
CAPN8-201ENST00000366872 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
CAPN8-201ENST00000366872 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
CAPN8-201ENST00000366872 KIDINS220Q9ULH0 1771 aa16.53■□□□□ 0.24
CAPN8-201ENST00000366872 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
CAPN8-201ENST00000366872 APAF1O14727 1248 aa16.53■□□□□ 0.24
CAPN8-201ENST00000366872 PUS7Q96PZ0 661 aaKnown RBP16.53■□□□□ 0.24
CAPN8-201ENST00000366872 ADGRB2O60241 1585 aa16.51■□□□□ 0.23
CAPN8-201ENST00000366872 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
CAPN8-201ENST00000366872 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
CAPN8-201ENST00000366872 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
CAPN8-201ENST00000366872 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
CAPN8-201ENST00000366872 ADGRB1O14514 1584 aa16.5■□□□□ 0.23
CAPN8-201ENST00000366872 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
CAPN8-201ENST00000366872 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
CAPN8-201ENST00000366872 CARD14Q9BXL6 1004 aa16.49■□□□□ 0.23
CAPN8-201ENST00000366872 USP19O94966 1318 aa16.48■□□□□ 0.23
CAPN8-201ENST00000366872 WDR63Q8IWG1 891 aa16.48■□□□□ 0.23
CAPN8-201ENST00000366872 CFAP74Q9C0B2 1584 aa16.48■□□□□ 0.23
CAPN8-201ENST00000366872 NSD2O96028 1365 aa16.48■□□□□ 0.23
CAPN8-201ENST00000366872 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms