RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 DDX10Q13206 875 aaKnown RBP15.28■□□□□ 0.04
H3F3A-202ENST00000366814 ANKLE2Q86XL3 938 aa15.28■□□□□ 0.04
H3F3A-202ENST00000366814 VWDEQ8N2E2 1590 aa15.28■□□□□ 0.04
H3F3A-202ENST00000366814 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.04
H3F3A-202ENST00000366814 LMTK2Q8IWU2 1503 aa15.27■□□□□ 0.04
H3F3A-202ENST00000366814 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.03
H3F3A-202ENST00000366814 FBXO41Q8TF61 875 aa15.27■□□□□ 0.03
H3F3A-202ENST00000366814 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.03
H3F3A-202ENST00000366814 IQGAP3Q86VI3 1631 aa15.26■□□□□ 0.03
H3F3A-202ENST00000366814 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
H3F3A-202ENST00000366814 POLR1AO95602 1720 aaPredicted RBP15.24■□□□□ 0.03
H3F3A-202ENST00000366814 HSPA5P11021 654 aaKnown RBP15.23■□□□□ 0.03
H3F3A-202ENST00000366814 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
H3F3A-202ENST00000366814 IDI1Q13907 227 aa15.22■□□□□ 0.03
H3F3A-202ENST00000366814 UBR1Q8IWV7 1749 aa15.21■□□□□ 0.03
H3F3A-202ENST00000366814 TET3O43151 1660 aa15.21■□□□□ 0.03
H3F3A-202ENST00000366814 CCDC144AA2RUR9 1427 aa15.21■□□□□ 0.03
H3F3A-202ENST00000366814 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.02
H3F3A-202ENST00000366814 ANP32CO43423 234 aa15.2■□□□□ 0.02
H3F3A-202ENST00000366814 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
H3F3A-202ENST00000366814 SLC52A1Q9NWF4 448 aa15.19■□□□□ 0.02
H3F3A-202ENST00000366814 PIK3C2BO00750 1634 aa15.19■□□□□ 0.02
H3F3A-202ENST00000366814 NOS1P29475 1434 aa15.19■□□□□ 0.02
H3F3A-202ENST00000366814 TXNDC2Q86VQ3 553 aa15.18■□□□□ 0.02
H3F3A-202ENST00000366814 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
H3F3A-202ENST00000366814 NEURL4Q96JN8 1562 aa15.18■□□□□ 0.02
H3F3A-202ENST00000366814 NPHP4O75161 1426 aaPredicted RBP15.18■□□□□ 0.02
H3F3A-202ENST00000366814 SYNMO15061 1565 aa15.18■□□□□ 0.02
H3F3A-202ENST00000366814 LTBP4Q8N2S1 1624 aa15.17■□□□□ 0.02
H3F3A-202ENST00000366814 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
H3F3A-202ENST00000366814 E9PCH4 1651 aa15.16■□□□□ 0.02
H3F3A-202ENST00000366814 MED14O60244 1454 aa15.15■□□□□ 0.02
H3F3A-202ENST00000366814 LTKP29376 864 aa15.15■□□□□ 0.02
H3F3A-202ENST00000366814 RALGAPBQ86X10 1494 aa15.15■□□□□ 0.02
H3F3A-202ENST00000366814 IQGAP1P46940 1657 aa15.15■□□□□ 0.02
H3F3A-202ENST00000366814 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
H3F3A-202ENST00000366814 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
H3F3A-202ENST00000366814 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
H3F3A-202ENST00000366814 TMEM2Q9UHN6 1383 aa15.13■□□□□ 0.01
H3F3A-202ENST00000366814 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
H3F3A-202ENST00000366814 KDM5AP29375 1690 aaKnown RBP15.13■□□□□ 0.01
H3F3A-202ENST00000366814 SLIT1O75093 1534 aa15.13■□□□□ 0.01
H3F3A-202ENST00000366814 WASHC2AQ641Q2 1341 aa15.13■□□□□ 0.01
H3F3A-202ENST00000366814 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
H3F3A-202ENST00000366814 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
H3F3A-202ENST00000366814 USP47Q96K76 1375 aa15.11■□□□□ 0.01
H3F3A-202ENST00000366814 CCDC7Q96M83 1385 aa15.11■□□□□ 0.01
H3F3A-202ENST00000366814 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
H3F3A-202ENST00000366814 ADGRB3O60242 1522 aa15.11■□□□□ 0.01
H3F3A-202ENST00000366814 BCANQ96GW7 911 aa15.1■□□□□ 0.01
H3F3A-202ENST00000366814 HDGFP51858 240 aaKnown RBP15.1■□□□□ 0.01
H3F3A-202ENST00000366814 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
H3F3A-202ENST00000366814 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
H3F3A-202ENST00000366814 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
H3F3A-202ENST00000366814 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
H3F3A-202ENST00000366814 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
H3F3A-202ENST00000366814 TRPM2O94759 1503 aa15.07■□□□□ 0
H3F3A-202ENST00000366814 CPS1P31327 1500 aa15.07■□□□□ 0
H3F3A-202ENST00000366814 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
H3F3A-202ENST00000366814 TMEM131LA2VDJ0 1609 aa15.06■□□□□ 0
H3F3A-202ENST00000366814 PRAG1Q86YV5 1406 aa15.05■□□□□ 0
H3F3A-202ENST00000366814 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ -0
H3F3A-202ENST00000366814 SLC26A8Q96RN1 970 aa15.05■□□□□ -0
H3F3A-202ENST00000366814 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ -0
H3F3A-202ENST00000366814 RIMS2Q9UQ26 1411 aa15.05■□□□□ -0
H3F3A-202ENST00000366814 TRPM1Q7Z4N2 1603 aa15.05■□□□□ -0
H3F3A-202ENST00000366814 RGL3Q3MIN7 710 aa15.04■□□□□ -0
H3F3A-202ENST00000366814 NUTM2DQ5VT03 806 aaPredicted RBP15.04■□□□□ -0
H3F3A-202ENST00000366814 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
H3F3A-202ENST00000366814 KIF7Q2M1P5 1343 aa15.04■□□□□ -0
H3F3A-202ENST00000366814 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
H3F3A-202ENST00000366814 STRCP1A6NGW2 1772 aa15.03■□□□□ -0
H3F3A-202ENST00000366814 STAC3Q96MF2 364 aa15.02■□□□□ -0
H3F3A-202ENST00000366814 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
H3F3A-202ENST00000366814 LAMC1P11047 1609 aa15.02□□□□□ -0.01
H3F3A-202ENST00000366814 ZFYVE9O95405 1425 aa15.02□□□□□ -0.01
H3F3A-202ENST00000366814 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
H3F3A-202ENST00000366814 TOM1O60784 492 aa15□□□□□ -0.01
H3F3A-202ENST00000366814 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
H3F3A-202ENST00000366814 KCNA6P17658 529 aa14.99□□□□□ -0.01
H3F3A-202ENST00000366814 CLTCL1P53675 1640 aa14.98□□□□□ -0.01
H3F3A-202ENST00000366814 GPRASP1Q5JY77 1395 aa14.98□□□□□ -0.01
H3F3A-202ENST00000366814 LRRC7Q96NW7 1537 aa14.98□□□□□ -0.01
H3F3A-202ENST00000366814 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
H3F3A-202ENST00000366814 KIF1BO60333 1816 aa14.98□□□□□ -0.01
H3F3A-202ENST00000366814 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.01
H3F3A-202ENST00000366814 TBX22Q9Y458 520 aa14.96□□□□□ -0.01
H3F3A-202ENST00000366814 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
H3F3A-202ENST00000366814 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
H3F3A-202ENST00000366814 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
H3F3A-202ENST00000366814 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
H3F3A-202ENST00000366814 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
H3F3A-202ENST00000366814 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
H3F3A-202ENST00000366814 XIRP1Q702N8 1843 aaKnown RBP14.91□□□□□ -0.02
H3F3A-202ENST00000366814 ADAMTS13Q76LX8 1427 aa14.91□□□□□ -0.02
H3F3A-202ENST00000366814 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
H3F3A-202ENST00000366814 KIAA1210Q9ULL0 1709 aa14.89□□□□□ -0.03
H3F3A-202ENST00000366814 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
H3F3A-202ENST00000366814 RPGRIP1LQ68CZ1 1315 aa14.89□□□□□ -0.03
H3F3A-202ENST00000366814 DIP2AQ14689 1571 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms