RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PACS2Q86VP3 889 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 ANKLE1Q8NAG6 615 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 ZNF516Q92618 1163 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 RNF25Q96BH1 459 aaPredicted RBP2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 RNF40O75150 1001 aa2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 SMCPP49901 116 aaPredicted RBP2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 HDGFP51858 240 aaKnown RBP2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 NPAS3Q8IXF0 933 aa2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 TRIM47Q96LD4 638 aa2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 PRR14Q9BWN1 585 aa2.26□□□□□ -2.05
RNU6-54P-201ENST00000365563 RNF223E7ERA6 249 aa2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 GDF11O95390 407 aa2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 GMPRP36959 345 aa2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 SLC4A3P48751 1232 aa2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 LCE2CQ5TA81 110 aa2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 IFNLR1Q8IU57 520 aaPredicted RBP2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 NKX2-3Q8TAU0 364 aa2.25□□□□□ -2.05
RNU6-54P-201ENST00000365563 ZPR1O75312 459 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 PHF14O94880 888 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 COPS2P61201 443 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 FOXK2Q01167 660 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 PPP1R15BQ5SWA1 713 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 SAMD7Q7Z3H4 446 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 CYP4X1Q8N118 509 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 ATP13A2Q9NQ11 1180 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 NXF1Q9UBU9 619 aaKnown RBP2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 DACH1Q9UI36 760 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 PCDHGA10Q9Y5H3 936 aa2.24□□□□□ -2.05
RNU6-54P-201ENST00000365563 ADAM23O75077 832 aa2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 SNRPBP14678 240 aaKnown RBP2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 APLP1P51693 650 aa2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 MAP3K9P80192 1104 aa2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 RASSF7Q02833 373 aa2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 FOXC1Q12948 553 aa2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 EPAS1Q99814 870 aa2.23□□□□□ -2.05
RNU6-54P-201ENST00000365563 NBPF26B4DH59 902 aa2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 PPP1R37O75864 691 aa2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 YBX3P16989 372 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 C6orf132Q5T0Z8 1188 aa2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 GPAT2Q6NUI2 795 aa2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 LIAT1Q6ZQX7 453 aa2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 SLF2Q8IX21 1173 aa2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 EMID1Q96A84 441 aaPredicted RBP2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 DNMT3AQ9Y6K1 912 aaPredicted RBP2.22□□□□□ -2.05
RNU6-54P-201ENST00000365563 H3BM21 787 aa2.21□□□□□ -2.06
RNU6-54P-201ENST00000365563 TOR4AQ9NXH8 423 aa2.21□□□□□ -2.06
RNU6-54P-201ENST00000365563 PKD2L1Q9P0L9 805 aa2.21□□□□□ -2.06
RNU6-54P-201ENST00000365563 PCDHB3Q9Y5E6 796 aa2.21□□□□□ -2.06
RNU6-54P-201ENST00000365563 TTC24A2A3L6 582 aaPredicted RBP2.2□□□□□ -2.06
RNU6-54P-201ENST00000365563 S1PR4O95977 384 aa2.2□□□□□ -2.06
RNU6-54P-201ENST00000365563 FZD5Q13467 585 aa2.2□□□□□ -2.06
RNU6-54P-201ENST00000365563 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
RNU6-54P-201ENST00000365563 RPIAP49247 311 aa2.19□□□□□ -2.06
RNU6-54P-201ENST00000365563 GSK3AP49840 483 aa2.19□□□□□ -2.06
RNU6-54P-201ENST00000365563 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
RNU6-54P-201ENST00000365563 TLL1O43897 1013 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 PSPNO60542 156 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 CD2BP2O95400 341 aaKnown RBP2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 ADH1BP00325 375 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 PDE4AP27815 886 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 KANK3Q6NY19 840 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 CRISPLD2Q9H0B8 497 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 TSKSQ9UJT2 592 aa2.18□□□□□ -2.06
RNU6-54P-201ENST00000365563 PPEF1O14829 653 aaPredicted RBP2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 BLOC1S3Q6QNY0 202 aa2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 CERKQ8TCT0 537 aa2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 RBM33Q96EV2 1170 aaKnown RBP2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 SLC6A16Q9GZN6 736 aa2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 RYDENQ9NUL5 291 aaKnown RBP2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 PNMA3Q9UL41 463 aa2.17□□□□□ -2.06
RNU6-54P-201ENST00000365563 SMAPO00193 183 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 MAP3K7O43318 606 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 VSIG8P0DPA2 414 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 SNIP1Q8TAD8 396 aaKnown RBP2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 TATDN2Q93075 761 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 CDCA7LQ96GN5 454 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 DDX27Q96GQ7 796 aaKnown RBP2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 ERBB4Q15303 1308 aa2.16□□□□□ -2.06
RNU6-54P-201ENST00000365563 MSTNO14793 375 aa2.15□□□□□ -2.07
RNU6-54P-201ENST00000365563 NR1I2O75469 434 aa2.15□□□□□ -2.07
RNU6-54P-201ENST00000365563 VEGFBP49765 207 aa2.15□□□□□ -2.07
RNU6-54P-201ENST00000365563 PRSS12P56730 875 aa2.15□□□□□ -2.07
RNU6-54P-201ENST00000365563 KMT5BQ4FZB7 885 aa2.15□□□□□ -2.07
RNU6-54P-201ENST00000365563 K7ELQ4 463 aaPredicted RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 ZBTB24O43167 697 aaPredicted RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 SMPD1P17405 629 aa2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 IRS1P35568 1242 aa2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 EN1Q05925 392 aaPredicted RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 PLA2G2CQ5R387 149 aa2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 SWT1Q5T5J6 900 aaKnown RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 GALNT6Q8NCL4 622 aa2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 REPIN1Q9BWE0 567 aaKnown RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 AVENQ9NQS1 362 aaPredicted RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 RBM27Q9P2N5 1060 aaKnown RBP2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 ADAMTS8Q9UP79 889 aa2.14□□□□□ -2.07
RNU6-54P-201ENST00000365563 WNT7AO00755 349 aa2.13□□□□□ -2.07
RNU6-54P-201ENST00000365563 MARSP56192 900 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms