RNA–Protein interactions for RNA: ENST00000365233.1

RNU4-12P-201, Transcript of RNA, U4 small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4-12P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-12P-201ENST00000365233 MTRQ99707 1265 aa9.34□□□□□ -0.91
RNU4-12P-201ENST00000365233 GNPATO15228 680 aa9.33□□□□□ -0.92
RNU4-12P-201ENST00000365233 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
RNU4-12P-201ENST00000365233 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
RNU4-12P-201ENST00000365233 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
RNU4-12P-201ENST00000365233 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
RNU4-12P-201ENST00000365233 KMT5BQ4FZB7 885 aa9.27□□□□□ -0.93
RNU4-12P-201ENST00000365233 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
RNU4-12P-201ENST00000365233 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
RNU4-12P-201ENST00000365233 FECHP22830 423 aa9.25□□□□□ -0.93
RNU4-12P-201ENST00000365233 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
RNU4-12P-201ENST00000365233 PCDHB3Q9Y5E6 796 aa9.25□□□□□ -0.93
RNU4-12P-201ENST00000365233 ZPR1O75312 459 aa9.23□□□□□ -0.93
RNU4-12P-201ENST00000365233 CFHP08603 1231 aa9.23□□□□□ -0.93
RNU4-12P-201ENST00000365233 SLC10A3P09131 477 aa9.23□□□□□ -0.93
RNU4-12P-201ENST00000365233 COPS2P61201 443 aa9.23□□□□□ -0.93
RNU4-12P-201ENST00000365233 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
RNU4-12P-201ENST00000365233 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
RNU4-12P-201ENST00000365233 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
RNU4-12P-201ENST00000365233 PPP1R18Q6NYC8 613 aa9.21□□□□□ -0.94
RNU4-12P-201ENST00000365233 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.94
RNU4-12P-201ENST00000365233 GGCXP38435 758 aa9.2□□□□□ -0.94
RNU4-12P-201ENST00000365233 BLOC1S3Q6QNY0 202 aa9.2□□□□□ -0.94
RNU4-12P-201ENST00000365233 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
RNU4-12P-201ENST00000365233 NKX2-3Q8TAU0 364 aa9.19□□□□□ -0.94
RNU4-12P-201ENST00000365233 MAP2K5Q13163 448 aa9.18□□□□□ -0.94
RNU4-12P-201ENST00000365233 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
RNU4-12P-201ENST00000365233 V9GY48 417 aaPredicted RBP9.17□□□□□ -0.94
RNU4-12P-201ENST00000365233 NR1I2O75469 434 aa9.16□□□□□ -0.94
RNU4-12P-201ENST00000365233 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
RNU4-12P-201ENST00000365233 PRKD2Q9BZL6 878 aa9.14□□□□□ -0.95
RNU4-12P-201ENST00000365233 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
RNU4-12P-201ENST00000365233 LAPTM4AQ15012 233 aa9.13□□□□□ -0.95
RNU4-12P-201ENST00000365233 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
RNU4-12P-201ENST00000365233 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
RNU4-12P-201ENST00000365233 IRF6O14896 467 aa9.12□□□□□ -0.95
RNU4-12P-201ENST00000365233 ADH1BP00325 375 aa9.12□□□□□ -0.95
RNU4-12P-201ENST00000365233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.12□□□□□ -0.95
RNU4-12P-201ENST00000365233 TLL1O43897 1013 aa9.11□□□□□ -0.95
RNU4-12P-201ENST00000365233 GCGRP47871 477 aa9.11□□□□□ -0.95
RNU4-12P-201ENST00000365233 NLRP7Q8WX94 980 aa9.11□□□□□ -0.95
RNU4-12P-201ENST00000365233 RNF223E7ERA6 249 aa9.09□□□□□ -0.95
RNU4-12P-201ENST00000365233 SCUBE3Q8IX30 993 aa9.09□□□□□ -0.95
RNU4-12P-201ENST00000365233 ANKLE1Q8NAG6 615 aa9.09□□□□□ -0.95
RNU4-12P-201ENST00000365233 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
RNU4-12P-201ENST00000365233 MORN1Q5T089 497 aa9.08□□□□□ -0.96
RNU4-12P-201ENST00000365233 FUT2Q10981 343 aa9.07□□□□□ -0.96
RNU4-12P-201ENST00000365233 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
RNU4-12P-201ENST00000365233 S1PR4O95977 384 aa9.06□□□□□ -0.96
RNU4-12P-201ENST00000365233 CD46P15529 392 aa9.06□□□□□ -0.96
RNU4-12P-201ENST00000365233 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
RNU4-12P-201ENST00000365233 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
RNU4-12P-201ENST00000365233 SLC6A16Q9GZN6 736 aa9.06□□□□□ -0.96
RNU4-12P-201ENST00000365233 SALL2Q9Y467 1007 aaPredicted RBP9.06□□□□□ -0.96
RNU4-12P-201ENST00000365233 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
RNU4-12P-201ENST00000365233 SPSB2Q99619 263 aa9.05□□□□□ -0.96
RNU4-12P-201ENST00000365233 NRG2O14511 850 aaPredicted RBP9.04□□□□□ -0.96
RNU4-12P-201ENST00000365233 THAP11Q96EK4 314 aa9.04□□□□□ -0.96
RNU4-12P-201ENST00000365233 GFRA3O60609 400 aa9.03□□□□□ -0.96
RNU4-12P-201ENST00000365233 SLC19A1P41440 591 aa9.03□□□□□ -0.96
RNU4-12P-201ENST00000365233 FMNL1O95466 1100 aaPredicted RBP9.02□□□□□ -0.97
RNU4-12P-201ENST00000365233 CLCN1P35523 988 aa9.02□□□□□ -0.97
RNU4-12P-201ENST00000365233 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
RNU4-12P-201ENST00000365233 Q6ZNB5 142 aa9.02□□□□□ -0.97
RNU4-12P-201ENST00000365233 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
RNU4-12P-201ENST00000365233 USP46P62068 366 aa9.01□□□□□ -0.97
RNU4-12P-201ENST00000365233 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
RNU4-12P-201ENST00000365233 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
RNU4-12P-201ENST00000365233 BRICD5Q6PL45 260 aa9□□□□□ -0.97
RNU4-12P-201ENST00000365233 BARGINQ6ZT62 677 aa9□□□□□ -0.97
RNU4-12P-201ENST00000365233 PPEF1O14829 653 aaPredicted RBP8.99□□□□□ -0.97
RNU4-12P-201ENST00000365233 KDM4AO75164 1064 aa8.99□□□□□ -0.97
RNU4-12P-201ENST00000365233 ZMYND10O75800 440 aa8.99□□□□□ -0.97
RNU4-12P-201ENST00000365233 MSS51Q4VC12 460 aa8.99□□□□□ -0.97
RNU4-12P-201ENST00000365233 SPRYD7Q5W111 196 aa8.99□□□□□ -0.97
RNU4-12P-201ENST00000365233 ZNF598Q86UK7 904 aaKnown RBP8.99□□□□□ -0.97
RNU4-12P-201ENST00000365233 Q3C1V9 767 aa8.98□□□□□ -0.97
RNU4-12P-201ENST00000365233 FAM217BQ9NTX9 383 aaPredicted RBP8.98□□□□□ -0.97
RNU4-12P-201ENST00000365233 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
RNU4-12P-201ENST00000365233 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
RNU4-12P-201ENST00000365233 FAM160A2Q8N612 972 aaPredicted RBP8.97□□□□□ -0.97
RNU4-12P-201ENST00000365233 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
RNU4-12P-201ENST00000365233 PRR20EP86478 221 aa8.96□□□□□ -0.98
RNU4-12P-201ENST00000365233 PRR20CP86479 221 aa8.96□□□□□ -0.98
RNU4-12P-201ENST00000365233 PRR20DP86480 221 aa8.96□□□□□ -0.98
RNU4-12P-201ENST00000365233 PRR20BP86481 221 aa8.96□□□□□ -0.98
RNU4-12P-201ENST00000365233 PRR20AP86496 221 aa8.96□□□□□ -0.98
RNU4-12P-201ENST00000365233 RPIAP49247 311 aa8.95□□□□□ -0.98
RNU4-12P-201ENST00000365233 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
RNU4-12P-201ENST00000365233 TRIM67Q6ZTA4 783 aa8.95□□□□□ -0.98
RNU4-12P-201ENST00000365233 AMHR2Q16671 573 aa8.94□□□□□ -0.98
RNU4-12P-201ENST00000365233 ZNF697Q5TEC3 545 aa8.94□□□□□ -0.98
RNU4-12P-201ENST00000365233 RNF19BQ6ZMZ0 732 aa8.94□□□□□ -0.98
RNU4-12P-201ENST00000365233 KRI1Q8N9T8 703 aaKnown RBP8.94□□□□□ -0.98
RNU4-12P-201ENST00000365233 HOXA2O43364 376 aa8.93□□□□□ -0.98
RNU4-12P-201ENST00000365233 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
RNU4-12P-201ENST00000365233 FCF1Q9Y324 198 aaKnown RBP8.93□□□□□ -0.98
RNU4-12P-201ENST00000365233 LCE2BO14633 110 aa8.91□□□□□ -0.98
RNU4-12P-201ENST00000365233 MMP16P51512 607 aa8.91□□□□□ -0.98
RNU4-12P-201ENST00000365233 PRDM9Q9NQV7 894 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms