RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 ANKLE1Q8NAG6 615 aa2.89□□□□□ -1.95
RNU6-340P-201ENST00000364005 SENP2Q9HC62 589 aa2.89□□□□□ -1.95
RNU6-340P-201ENST00000364005 NXF1Q9UBU9 619 aaKnown RBP2.89□□□□□ -1.95
RNU6-340P-201ENST00000364005 PCDHGA10Q9Y5H3 936 aa2.89□□□□□ -1.95
RNU6-340P-201ENST00000364005 ZPR1O75312 459 aa2.88□□□□□ -1.95
RNU6-340P-201ENST00000364005 FKBP8Q14318 412 aa2.88□□□□□ -1.95
RNU6-340P-201ENST00000364005 IFNLR1Q8IU57 520 aaPredicted RBP2.88□□□□□ -1.95
RNU6-340P-201ENST00000364005 TOR4AQ9NXH8 423 aa2.88□□□□□ -1.95
RNU6-340P-201ENST00000364005 ADAM23O75077 832 aa2.87□□□□□ -1.95
RNU6-340P-201ENST00000364005 VEGFBP49765 207 aa2.87□□□□□ -1.95
RNU6-340P-201ENST00000364005 LMOD2Q6P5Q4 547 aa2.87□□□□□ -1.95
RNU6-340P-201ENST00000364005 ERBB4Q15303 1308 aa2.87□□□□□ -1.95
RNU6-340P-201ENST00000364005 NPAS3Q8IXF0 933 aa2.86□□□□□ -1.95
RNU6-340P-201ENST00000364005 CYP4X1Q8N118 509 aa2.86□□□□□ -1.95
RNU6-340P-201ENST00000364005 Q8N3U1 123 aa2.86□□□□□ -1.95
RNU6-340P-201ENST00000364005 FBXW7Q969H0 707 aa2.86□□□□□ -1.95
RNU6-340P-201ENST00000364005 KIFC2Q96AC6 838 aa2.86□□□□□ -1.95
RNU6-340P-201ENST00000364005 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
RNU6-340P-201ENST00000364005 H3BM21 787 aa2.85□□□□□ -1.95
RNU6-340P-201ENST00000364005 LAMC2Q13753 1193 aa2.85□□□□□ -1.95
RNU6-340P-201ENST00000364005 C6orf132Q5T0Z8 1188 aa2.85□□□□□ -1.95
RNU6-340P-201ENST00000364005 TYW1BQ6NUM6 668 aa2.85□□□□□ -1.95
RNU6-340P-201ENST00000364005 PACS2Q86VP3 889 aa2.85□□□□□ -1.95
RNU6-340P-201ENST00000364005 RNF225M0QZC1 329 aaPredicted RBP2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 RNF40O75150 1001 aa2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 S1PR4O95977 384 aa2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 PLA2G2CQ5R387 149 aa2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 TSKSQ9UJT2 592 aa2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 DNMT3AQ9Y6K1 912 aaPredicted RBP2.84□□□□□ -1.95
RNU6-340P-201ENST00000364005 SMAPO00193 183 aa2.83□□□□□ -1.96
RNU6-340P-201ENST00000364005 STK25O00506 426 aa2.83□□□□□ -1.96
RNU6-340P-201ENST00000364005 PHF14O94880 888 aa2.83□□□□□ -1.96
RNU6-340P-201ENST00000364005 TTC24A2A3L6 582 aaPredicted RBP2.82□□□□□ -1.96
RNU6-340P-201ENST00000364005 FOXK2Q01167 660 aa2.82□□□□□ -1.96
RNU6-340P-201ENST00000364005 TAOK2Q9UL54 1235 aa2.82□□□□□ -1.96
RNU6-340P-201ENST00000364005 ADAMTS8Q9UP79 889 aa2.82□□□□□ -1.96
RNU6-340P-201ENST00000364005 TLL1O43897 1013 aa2.81□□□□□ -1.96
RNU6-340P-201ENST00000364005 HDGFP51858 240 aaKnown RBP2.81□□□□□ -1.96
RNU6-340P-201ENST00000364005 MAP3K9P80192 1104 aa2.81□□□□□ -1.96
RNU6-340P-201ENST00000364005 SMPD1P17405 629 aa2.8□□□□□ -1.96
RNU6-340P-201ENST00000364005 IRS1P35568 1242 aa2.8□□□□□ -1.96
RNU6-340P-201ENST00000364005 PPP1R15BQ5SWA1 713 aa2.8□□□□□ -1.96
RNU6-340P-201ENST00000364005 BLOC1S3Q6QNY0 202 aa2.79□□□□□ -1.96
RNU6-340P-201ENST00000364005 RBM33Q96EV2 1170 aaKnown RBP2.79□□□□□ -1.96
RNU6-340P-201ENST00000364005 PCDHB3Q9Y5E6 796 aa2.79□□□□□ -1.96
RNU6-340P-201ENST00000364005 C3orf80F5H4A9 247 aa2.78□□□□□ -1.96
RNU6-340P-201ENST00000364005 MSTNO14793 375 aa2.78□□□□□ -1.96
RNU6-340P-201ENST00000364005 CD2BP2O95400 341 aaKnown RBP2.78□□□□□ -1.96
RNU6-340P-201ENST00000364005 NECTIN2Q92692 538 aa2.78□□□□□ -1.96
RNU6-340P-201ENST00000364005 TATDN2Q93075 761 aa2.77□□□□□ -1.97
RNU6-340P-201ENST00000364005 EPAS1Q99814 870 aa2.77□□□□□ -1.97
RNU6-340P-201ENST00000364005 J3QL48 77 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 VSIG8P0DPA2 414 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 RPIAP49247 311 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 SNIP1Q8TAD8 396 aaKnown RBP2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 HPS1Q92902 700 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 SLC6A16Q9GZN6 736 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 CRISPLD2Q9H0B8 497 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 GOLGA2P5Q9HBQ8 144 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 FAM198AQ9UFP1 575 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 PNMA3Q9UL41 463 aa2.76□□□□□ -1.97
RNU6-340P-201ENST00000364005 K7ELQ4 463 aaPredicted RBP2.75□□□□□ -1.97
RNU6-340P-201ENST00000364005 KANK3Q6NY19 840 aa2.75□□□□□ -1.97
RNU6-340P-201ENST00000364005 SLF2Q8IX21 1173 aa2.75□□□□□ -1.97
RNU6-340P-201ENST00000364005 CDCA7LQ96GN5 454 aa2.75□□□□□ -1.97
RNU6-340P-201ENST00000364005 SPOCK3Q9BQ16 436 aa2.75□□□□□ -1.97
RNU6-340P-201ENST00000364005 NBPF26B4DH59 902 aa2.74□□□□□ -1.97
RNU6-340P-201ENST00000364005 ADH1BP00325 375 aa2.74□□□□□ -1.97
RNU6-340P-201ENST00000364005 SWT1Q5T5J6 900 aaKnown RBP2.74□□□□□ -1.97
RNU6-340P-201ENST00000364005 PRR14Q9BWN1 585 aa2.74□□□□□ -1.97
RNU6-340P-201ENST00000364005 PRSS12P56730 875 aa2.73□□□□□ -1.97
RNU6-340P-201ENST00000364005 TSR1Q2NL82 804 aaKnown RBP2.73□□□□□ -1.97
RNU6-340P-201ENST00000364005 PLA2G4EQ3MJ16 856 aa2.73□□□□□ -1.97
RNU6-340P-201ENST00000364005 NUDT18Q6ZVK8 323 aa2.73□□□□□ -1.97
RNU6-340P-201ENST00000364005 EMILIN3Q9NT22 766 aa2.73□□□□□ -1.97
RNU6-340P-201ENST00000364005 COBLO75128 1261 aa2.72□□□□□ -1.97
RNU6-340P-201ENST00000364005 BMP1P13497 986 aa2.72□□□□□ -1.97
RNU6-340P-201ENST00000364005 TRIM46Q7Z4K8 759 aa2.72□□□□□ -1.97
RNU6-340P-201ENST00000364005 WNT7AO00755 349 aa2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 PROCP04070 461 aa2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 ITGB2P05107 769 aa2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 PDE4AP27815 886 aa2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 MARSP56192 900 aaKnown RBP2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 ZNF385CQ66K41 422 aaPredicted RBP2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 GALNT6Q8NCL4 622 aa2.71□□□□□ -1.98
RNU6-340P-201ENST00000364005 NCKAP5LQ9HCH0 1330 aa2.7□□□□□ -1.98
RNU6-340P-201ENST00000364005 MAP3K7O43318 606 aa2.7□□□□□ -1.98
RNU6-340P-201ENST00000364005 SLC4A3P48751 1232 aa2.7□□□□□ -1.98
RNU6-340P-201ENST00000364005 KRT76Q01546 638 aa2.7□□□□□ -1.98
RNU6-340P-201ENST00000364005 MRGPRX2Q96LB1 330 aa2.7□□□□□ -1.98
RNU6-340P-201ENST00000364005 SVOPQ8N4V2 548 aa2.69□□□□□ -1.98
RNU6-340P-201ENST00000364005 DDX12PQ92771 950 aa2.69□□□□□ -1.98
RNU6-340P-201ENST00000364005 SCARF2Q96GP6 870 aaPredicted RBP2.69□□□□□ -1.98
RNU6-340P-201ENST00000364005 CNTNAP3BQ96NU0 1288 aa2.69□□□□□ -1.98
RNU6-340P-201ENST00000364005 CNTNAP3Q9BZ76 1288 aa2.69□□□□□ -1.98
RNU6-340P-201ENST00000364005 FCF1Q9Y324 198 aaKnown RBP2.69□□□□□ -1.98
RNU6-340P-201ENST00000364005 ACTN4O43707 911 aaKnown RBP2.68□□□□□ -1.98
RNU6-340P-201ENST00000364005 NR1I2O75469 434 aa2.68□□□□□ -1.98
RNU6-340P-201ENST00000364005 ARHGEF15O94989 841 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms