RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 APAF1O14727 1248 aa18.22■□□□□ 0.51
COL11A2-202ENST00000361917 APPP05067 770 aa18.22■□□□□ 0.51
COL11A2-202ENST00000361917 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
COL11A2-202ENST00000361917 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.51
COL11A2-202ENST00000361917 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
COL11A2-202ENST00000361917 USP35Q9P2H5 1018 aa18.21■□□□□ 0.51
COL11A2-202ENST00000361917 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
COL11A2-202ENST00000361917 USP47Q96K76 1375 aa18.21■□□□□ 0.51
COL11A2-202ENST00000361917 TRIM29Q14134 588 aa18.21■□□□□ 0.51
COL11A2-202ENST00000361917 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
COL11A2-202ENST00000361917 PCMTD1Q96MG8 357 aaPredicted RBP18.21■□□□□ 0.51
COL11A2-202ENST00000361917 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-202ENST00000361917 TPM1P09493 284 aa18.2■□□□□ 0.5
COL11A2-202ENST00000361917 AMOTL1Q8IY63 956 aa18.2■□□□□ 0.5
COL11A2-202ENST00000361917 FBXW7Q969H0 707 aa18.2■□□□□ 0.5
COL11A2-202ENST00000361917 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
COL11A2-202ENST00000361917 SKOR2Q2VWA4 1001 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-202ENST00000361917 SYTL4Q96C24 671 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-202ENST00000361917 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
COL11A2-202ENST00000361917 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
COL11A2-202ENST00000361917 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
COL11A2-202ENST00000361917 DIAPH1O60610 1272 aaKnown RBP18.19■□□□□ 0.5
COL11A2-202ENST00000361917 RIPK4P57078 832 aa18.19■□□□□ 0.5
COL11A2-202ENST00000361917 FOSBP53539 338 aa18.17■□□□□ 0.5
COL11A2-202ENST00000361917 LRRFIP1Q32MZ4 808 aaKnown RBP18.17■□□□□ 0.5
COL11A2-202ENST00000361917 DHX16O60231 1041 aaKnown RBP18.17■□□□□ 0.5
COL11A2-202ENST00000361917 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
COL11A2-202ENST00000361917 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
COL11A2-202ENST00000361917 WIZO95785 1651 aa18.17■□□□□ 0.5
COL11A2-202ENST00000361917 GSE1Q14687 1217 aa18.17■□□□□ 0.5
COL11A2-202ENST00000361917 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
COL11A2-202ENST00000361917 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
COL11A2-202ENST00000361917 VPS37DQ86XT2 251 aa18.16■□□□□ 0.5
COL11A2-202ENST00000361917 REC8O95072 547 aa18.16■□□□□ 0.5
COL11A2-202ENST00000361917 CPLX2Q6PUV4 134 aaKnown RBP18.16■□□□□ 0.5
COL11A2-202ENST00000361917 CPLX1O14810 134 aa18.16■□□□□ 0.5
COL11A2-202ENST00000361917 HSP90AA2PQ14568 343 aaPredicted RBP18.16■□□□□ 0.5
COL11A2-202ENST00000361917 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
COL11A2-202ENST00000361917 NFXL1Q6ZNB6 911 aa18.15■□□□□ 0.5
COL11A2-202ENST00000361917 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
COL11A2-202ENST00000361917 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.5
COL11A2-202ENST00000361917 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.5
COL11A2-202ENST00000361917 BICD2Q8TD16 824 aa18.14■□□□□ 0.49
COL11A2-202ENST00000361917 PSME1Q06323 249 aa18.13■□□□□ 0.49
COL11A2-202ENST00000361917 CCDC70Q6NSX1 233 aa18.13■□□□□ 0.49
COL11A2-202ENST00000361917 PATL2C9JE40 543 aaKnown RBP18.13■□□□□ 0.49
COL11A2-202ENST00000361917 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.49
COL11A2-202ENST00000361917 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
COL11A2-202ENST00000361917 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
COL11A2-202ENST00000361917 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
COL11A2-202ENST00000361917 API5Q9BZZ5 524 aaKnown RBP18.11■□□□□ 0.49
COL11A2-202ENST00000361917 VPS37CA5D8V6 355 aaPredicted RBP18.11■□□□□ 0.49
COL11A2-202ENST00000361917 SETQ01105 290 aaPredicted RBP18.11■□□□□ 0.49
COL11A2-202ENST00000361917 TRDNQ13061 729 aa18.11■□□□□ 0.49
COL11A2-202ENST00000361917 CCDC47Q96A33 483 aaKnown RBP18.1■□□□□ 0.49
COL11A2-202ENST00000361917 HMOX1P09601 288 aa18.1■□□□□ 0.49
COL11A2-202ENST00000361917 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
COL11A2-202ENST00000361917 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
COL11A2-202ENST00000361917 RNF20Q5VTR2 975 aa18.09■□□□□ 0.49
COL11A2-202ENST00000361917 ROCK1Q13464 1354 aa18.09■□□□□ 0.49
COL11A2-202ENST00000361917 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
COL11A2-202ENST00000361917 ERICH2A1L162 156 aa18.08■□□□□ 0.49
COL11A2-202ENST00000361917 ANKRD20A12PQ8NF67 263 aa18.08■□□□□ 0.48
COL11A2-202ENST00000361917 GPS2Q13227 327 aa18.08■□□□□ 0.48
COL11A2-202ENST00000361917 IPO7O95373 1038 aaKnown RBP18.07■□□□□ 0.48
COL11A2-202ENST00000361917 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
COL11A2-202ENST00000361917 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
COL11A2-202ENST00000361917 SMC3Q9UQE7 1217 aa18.07■□□□□ 0.48
COL11A2-202ENST00000361917 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL11A2-202ENST00000361917 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
COL11A2-202ENST00000361917 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
COL11A2-202ENST00000361917 FYB1O15117 783 aa18.06■□□□□ 0.48
COL11A2-202ENST00000361917 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
COL11A2-202ENST00000361917 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
COL11A2-202ENST00000361917 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
COL11A2-202ENST00000361917 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
COL11A2-202ENST00000361917 PTPRGP23470 1445 aa18.05■□□□□ 0.48
COL11A2-202ENST00000361917 ZNF771Q7L3S4 317 aaPredicted RBP18.05■□□□□ 0.48
COL11A2-202ENST00000361917 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
COL11A2-202ENST00000361917 NUTM2GQ5VZR2 741 aa18.05■□□□□ 0.48
COL11A2-202ENST00000361917 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
COL11A2-202ENST00000361917 CHMP5Q9NZZ3 219 aa18.04■□□□□ 0.48
COL11A2-202ENST00000361917 KDM4AO75164 1064 aa18.04■□□□□ 0.48
COL11A2-202ENST00000361917 SASS6Q6UVJ0 657 aa18.04■□□□□ 0.48
COL11A2-202ENST00000361917 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
COL11A2-202ENST00000361917 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
COL11A2-202ENST00000361917 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.48
COL11A2-202ENST00000361917 CCDC43Q96MW1 224 aaKnown RBP18.02■□□□□ 0.48
COL11A2-202ENST00000361917 WASHC4Q2M389 1173 aa18.02■□□□□ 0.48
COL11A2-202ENST00000361917 ERC2O15083 957 aa18.02■□□□□ 0.47
COL11A2-202ENST00000361917 KLHL34Q8N239 644 aa18.02■□□□□ 0.47
COL11A2-202ENST00000361917 PANK1Q8TE04 598 aa18.02■□□□□ 0.47
COL11A2-202ENST00000361917 GNAI1P63096 354 aa18.01■□□□□ 0.47
COL11A2-202ENST00000361917 CCDC27Q2M243 656 aa18.01■□□□□ 0.47
COL11A2-202ENST00000361917 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
COL11A2-202ENST00000361917 NAP1L1P55209 391 aaKnown RBP18.01■□□□□ 0.47
COL11A2-202ENST00000361917 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
COL11A2-202ENST00000361917 MTMR7Q9Y216 660 aa18■□□□□ 0.47
COL11A2-202ENST00000361917 CABP2Q9NPB3 220 aa18■□□□□ 0.47
COL11A2-202ENST00000361917 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms