RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
LDB3-202ENST00000361373 RIPK4P57078 832 aa16.74■□□□□ 0.27
LDB3-202ENST00000361373 ROCK1Q13464 1354 aa16.74■□□□□ 0.27
LDB3-202ENST00000361373 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
LDB3-202ENST00000361373 SCAPERQ9BY12 1400 aa16.73■□□□□ 0.27
LDB3-202ENST00000361373 KIAA1107Q9UPP5 1409 aa16.73■□□□□ 0.27
LDB3-202ENST00000361373 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
LDB3-202ENST00000361373 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
LDB3-202ENST00000361373 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
LDB3-202ENST00000361373 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
LDB3-202ENST00000361373 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
LDB3-202ENST00000361373 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
LDB3-202ENST00000361373 AAMPQ13685 434 aa16.72■□□□□ 0.27
LDB3-202ENST00000361373 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
LDB3-202ENST00000361373 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
LDB3-202ENST00000361373 ST18O60284 1047 aa16.7■□□□□ 0.26
LDB3-202ENST00000361373 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
LDB3-202ENST00000361373 CFAP70Q5T0N1 1121 aa16.7■□□□□ 0.26
LDB3-202ENST00000361373 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
LDB3-202ENST00000361373 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
LDB3-202ENST00000361373 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
LDB3-202ENST00000361373 C9orf78Q9NZ63 289 aaPredicted RBP16.69■□□□□ 0.26
LDB3-202ENST00000361373 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
LDB3-202ENST00000361373 NLRP6P59044 892 aa16.68■□□□□ 0.26
LDB3-202ENST00000361373 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
LDB3-202ENST00000361373 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
LDB3-202ENST00000361373 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
LDB3-202ENST00000361373 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
LDB3-202ENST00000361373 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
LDB3-202ENST00000361373 CABP2Q9NPB3 220 aa16.67■□□□□ 0.26
LDB3-202ENST00000361373 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
LDB3-202ENST00000361373 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
LDB3-202ENST00000361373 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
LDB3-202ENST00000361373 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
LDB3-202ENST00000361373 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
LDB3-202ENST00000361373 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
LDB3-202ENST00000361373 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
LDB3-202ENST00000361373 CHAF1AQ13111 956 aaPredicted RBP16.65■□□□□ 0.26
LDB3-202ENST00000361373 BCL2L13Q9BXK5 485 aa16.65■□□□□ 0.26
LDB3-202ENST00000361373 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
LDB3-202ENST00000361373 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
LDB3-202ENST00000361373 DAPK1P53355 1430 aa16.65■□□□□ 0.26
LDB3-202ENST00000361373 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
LDB3-202ENST00000361373 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
LDB3-202ENST00000361373 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
LDB3-202ENST00000361373 CUL7Q14999 1698 aa16.64■□□□□ 0.25
LDB3-202ENST00000361373 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
LDB3-202ENST00000361373 TSPYL4Q9UJ04 414 aa16.64■□□□□ 0.25
LDB3-202ENST00000361373 SUPT6HQ7KZ85 1726 aaKnown RBP16.64■□□□□ 0.25
LDB3-202ENST00000361373 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
LDB3-202ENST00000361373 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
LDB3-202ENST00000361373 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
LDB3-202ENST00000361373 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
LDB3-202ENST00000361373 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
LDB3-202ENST00000361373 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
LDB3-202ENST00000361373 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
LDB3-202ENST00000361373 TPM4P67936 248 aa16.61■□□□□ 0.25
LDB3-202ENST00000361373 FAM161AQ3B820 660 aa16.61■□□□□ 0.25
LDB3-202ENST00000361373 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
LDB3-202ENST00000361373 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
LDB3-202ENST00000361373 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
LDB3-202ENST00000361373 MTHFSP49914 203 aa16.6■□□□□ 0.25
LDB3-202ENST00000361373 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
LDB3-202ENST00000361373 REC8O95072 547 aa16.6■□□□□ 0.25
LDB3-202ENST00000361373 MSNP26038 577 aaKnown RBP16.6■□□□□ 0.25
LDB3-202ENST00000361373 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
LDB3-202ENST00000361373 DIAPH3Q9NSV4 1193 aa16.6■□□□□ 0.25
LDB3-202ENST00000361373 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
LDB3-202ENST00000361373 RILPL2Q969X0 211 aa16.59■□□□□ 0.25
LDB3-202ENST00000361373 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
LDB3-202ENST00000361373 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
LDB3-202ENST00000361373 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
LDB3-202ENST00000361373 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
LDB3-202ENST00000361373 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.25
LDB3-202ENST00000361373 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.25
LDB3-202ENST00000361373 ESCO1Q5FWF5 840 aa16.58■□□□□ 0.25
LDB3-202ENST00000361373 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.25
LDB3-202ENST00000361373 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
LDB3-202ENST00000361373 CPLX2Q6PUV4 134 aaKnown RBP16.58■□□□□ 0.24
LDB3-202ENST00000361373 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
LDB3-202ENST00000361373 HMOX1P09601 288 aa16.57■□□□□ 0.24
LDB3-202ENST00000361373 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
LDB3-202ENST00000361373 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
LDB3-202ENST00000361373 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
LDB3-202ENST00000361373 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
LDB3-202ENST00000361373 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
LDB3-202ENST00000361373 PLIN1O60240 522 aa16.56■□□□□ 0.24
LDB3-202ENST00000361373 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
LDB3-202ENST00000361373 CLSTN1O94985 981 aa16.56■□□□□ 0.24
LDB3-202ENST00000361373 WWC1Q8IX03 1113 aa16.56■□□□□ 0.24
LDB3-202ENST00000361373 MSH5O43196 834 aa16.56■□□□□ 0.24
LDB3-202ENST00000361373 SYNE3Q6ZMZ3 975 aa16.55■□□□□ 0.24
LDB3-202ENST00000361373 PHF14O94880 888 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 PPP2R1AP30153 589 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 NBPF1Q3BBV0 1214 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
LDB3-202ENST00000361373 RTEL1-TNFRSF6BF6WH68 1400 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms