RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 MYBBP1AQ9BQG0 1328 aaKnown RBP11.98□□□□□ -0.49
TOP1-201ENST00000361337 MYO3AQ8NEV4 1616 aa11.98□□□□□ -0.49
TOP1-201ENST00000361337 ATP10AO60312 1499 aa11.97□□□□□ -0.49
TOP1-201ENST00000361337 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
TOP1-201ENST00000361337 GPATCH8Q9UKJ3 1502 aaKnown RBP11.97□□□□□ -0.49
TOP1-201ENST00000361337 TRPM1Q7Z4N2 1603 aa11.97□□□□□ -0.49
TOP1-201ENST00000361337 NAP1L5Q96NT1 182 aaPredicted RBP11.97□□□□□ -0.49
TOP1-201ENST00000361337 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
TOP1-201ENST00000361337 C9orf84Q5VXU9 1444 aa11.97□□□□□ -0.49
TOP1-201ENST00000361337 TMEM132EQ6IEE7 984 aa11.96□□□□□ -0.49
TOP1-201ENST00000361337 POGKQ9P215 609 aa11.96□□□□□ -0.49
TOP1-201ENST00000361337 ZBTB7CA1YPR0 619 aa11.96□□□□□ -0.49
TOP1-201ENST00000361337 TCERG1O14776 1098 aaKnown RBP11.96□□□□□ -0.49
TOP1-201ENST00000361337 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
TOP1-201ENST00000361337 CAMSAP2Q08AD1 1489 aa11.96□□□□□ -0.49
TOP1-201ENST00000361337 PIK3C2BO00750 1634 aa11.96□□□□□ -0.5
TOP1-201ENST00000361337 IQGAP1P46940 1657 aa11.96□□□□□ -0.5
TOP1-201ENST00000361337 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.5
TOP1-201ENST00000361337 SLC4A3P48751 1232 aa11.96□□□□□ -0.5
TOP1-201ENST00000361337 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
TOP1-201ENST00000361337 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
TOP1-201ENST00000361337 CD109Q6YHK3 1445 aa11.95□□□□□ -0.5
TOP1-201ENST00000361337 A0A0U1RQG5 324 aaPredicted RBP11.95□□□□□ -0.5
TOP1-201ENST00000361337 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
TOP1-201ENST00000361337 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
TOP1-201ENST00000361337 GLI2P10070 1586 aa11.95□□□□□ -0.5
TOP1-201ENST00000361337 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
TOP1-201ENST00000361337 ABCA6Q8N139 1617 aa11.94□□□□□ -0.5
TOP1-201ENST00000361337 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
TOP1-201ENST00000361337 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 RALGAPBQ86X10 1494 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 ARID3AQ99856 593 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 CFAP74Q9C0B2 1584 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
TOP1-201ENST00000361337 FRMPD1Q5SYB0 1578 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 RALBP1Q15311 655 aa11.93□□□□□ -0.5
TOP1-201ENST00000361337 ASXL2Q76L83 1435 aa11.92□□□□□ -0.5
TOP1-201ENST00000361337 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
TOP1-201ENST00000361337 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
TOP1-201ENST00000361337 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
TOP1-201ENST00000361337 CCDC144AA2RUR9 1427 aa11.91□□□□□ -0.5
TOP1-201ENST00000361337 KIDINS220Q9ULH0 1771 aa11.91□□□□□ -0.5
TOP1-201ENST00000361337 ZFYVE16Q7Z3T8 1539 aa11.9□□□□□ -0.5
TOP1-201ENST00000361337 SRPK2P78362 688 aaKnown RBP11.9□□□□□ -0.5
TOP1-201ENST00000361337 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
TOP1-201ENST00000361337 NLRP13Q86W25 1043 aa11.9□□□□□ -0.5
TOP1-201ENST00000361337 BRPF3Q9ULD4 1205 aa11.9□□□□□ -0.5
TOP1-201ENST00000361337 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
TOP1-201ENST00000361337 CFAP70Q5T0N1 1121 aa11.89□□□□□ -0.51
TOP1-201ENST00000361337 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
TOP1-201ENST00000361337 LMTK2Q8IWU2 1503 aa11.89□□□□□ -0.51
TOP1-201ENST00000361337 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
TOP1-201ENST00000361337 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
TOP1-201ENST00000361337 MYOM1P52179 1685 aa11.88□□□□□ -0.51
TOP1-201ENST00000361337 SIGLEC1Q9BZZ2 1709 aa11.88□□□□□ -0.51
TOP1-201ENST00000361337 MS4A1P11836 297 aa11.88□□□□□ -0.51
TOP1-201ENST00000361337 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
TOP1-201ENST00000361337 TET3O43151 1660 aa11.87□□□□□ -0.51
TOP1-201ENST00000361337 KTN1Q86UP2 1357 aaKnown RBP11.87□□□□□ -0.51
TOP1-201ENST00000361337 PLEKHH2Q8IVE3 1493 aa11.87□□□□□ -0.51
TOP1-201ENST00000361337 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
TOP1-201ENST00000361337 KNSTRNQ9Y448 316 aa11.86□□□□□ -0.51
TOP1-201ENST00000361337 KDM5AP29375 1690 aaKnown RBP11.85□□□□□ -0.51
TOP1-201ENST00000361337 KIF13AQ9H1H9 1805 aa11.85□□□□□ -0.51
TOP1-201ENST00000361337 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
TOP1-201ENST00000361337 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
TOP1-201ENST00000361337 PDE3BQ13370 1112 aa11.85□□□□□ -0.51
TOP1-201ENST00000361337 NFKBIBQ15653 356 aa11.85□□□□□ -0.51
TOP1-201ENST00000361337 RBM33Q96EV2 1170 aaKnown RBP11.85□□□□□ -0.51
TOP1-201ENST00000361337 USP35Q9P2H5 1018 aa11.85□□□□□ -0.51
TOP1-201ENST00000361337 FANCAO15360 1455 aa11.84□□□□□ -0.51
TOP1-201ENST00000361337 ADGRL1O94910 1474 aa11.84□□□□□ -0.51
TOP1-201ENST00000361337 PANK3Q9H999 370 aa11.84□□□□□ -0.51
TOP1-201ENST00000361337 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.51
TOP1-201ENST00000361337 TMF1P82094 1093 aa11.83□□□□□ -0.52
TOP1-201ENST00000361337 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
TOP1-201ENST00000361337 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
TOP1-201ENST00000361337 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
TOP1-201ENST00000361337 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
TOP1-201ENST00000361337 MROH2AA6NES4 1674 aa11.82□□□□□ -0.52
TOP1-201ENST00000361337 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
TOP1-201ENST00000361337 TESK2Q96S53 571 aa11.82□□□□□ -0.52
TOP1-201ENST00000361337 MADDQ8WXG6 1647 aa11.81□□□□□ -0.52
TOP1-201ENST00000361337 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
TOP1-201ENST00000361337 GSE1Q14687 1217 aa11.81□□□□□ -0.52
TOP1-201ENST00000361337 PPLO60437 1756 aa11.81□□□□□ -0.52
TOP1-201ENST00000361337 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
TOP1-201ENST00000361337 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
TOP1-201ENST00000361337 CCDC141Q6ZP82 1450 aa11.8□□□□□ -0.52
TOP1-201ENST00000361337 PLEKHH1Q9ULM0 1364 aa11.8□□□□□ -0.52
TOP1-201ENST00000361337 BLMP54132 1417 aaPredicted RBP11.8□□□□□ -0.52
TOP1-201ENST00000361337 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
TOP1-201ENST00000361337 RGS3P49796 1198 aa11.79□□□□□ -0.52
TOP1-201ENST00000361337 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
TOP1-201ENST00000361337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.528e-7■■□□□ 13.9
TOP1-201ENST00000361337 IDI1Q13907 227 aa11.78□□□□□ -0.52
TOP1-201ENST00000361337 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP1-201ENST00000361337 HECW2Q9P2P5 1572 aa11.78□□□□□ -0.52
TOP1-201ENST00000361337 PLCH2O75038 1416 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms